RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GBP4Q96PP9 640 aa14.16□□□□□ -0.14
TRAPPC9-202ENST00000438773 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
TRAPPC9-202ENST00000438773 PLEKHG3A1L390 1219 aa14.16□□□□□ -0.14
TRAPPC9-202ENST00000438773 EYA1Q99502 592 aa14.16□□□□□ -0.14
TRAPPC9-202ENST00000438773 FOXD4L6Q3SYB3 417 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 FOXD4L3Q6VB84 417 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 CDC45O75419 566 aa14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 IL13P35225 146 aa14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 C8orf58Q8NAV2 365 aa14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 INSRP06213 1382 aa14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 SPHKAPQ2M3C7 1700 aa14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 RPAP2Q8IXW5 612 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 CLASRPQ8N2M8 674 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-202ENST00000438773 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-202ENST00000438773 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
TRAPPC9-202ENST00000438773 TSPYL6Q8N831 410 aa14.14□□□□□ -0.15
TRAPPC9-202ENST00000438773 GCP02774 474 aa14.14□□□□□ -0.15
TRAPPC9-202ENST00000438773 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
TRAPPC9-202ENST00000438773 RLBP1P12271 317 aa14.13□□□□□ -0.15
TRAPPC9-202ENST00000438773 MSNP26038 577 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-202ENST00000438773 TRMT2AQ8IZ69 625 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-202ENST00000438773 PCDHB15Q9Y5E8 787 aa14.13□□□□□ -0.15
TRAPPC9-202ENST00000438773 MSH6P52701 1360 aa14.13□□□□□ -0.15
TRAPPC9-202ENST00000438773 NPHP3Q7Z494 1330 aa14.13□□□□□ -0.15
TRAPPC9-202ENST00000438773 NGLY1Q96IV0 654 aa14.13□□□□□ -0.15
TRAPPC9-202ENST00000438773 LRRC59Q96AG4 307 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 RUFY2Q8WXA3 655 aa14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 TRIM35Q9UPQ4 493 aa14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 INO80Q9ULG1 1556 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 TMX4Q9H1E5 349 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 SRGAP3O43295 1099 aa14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 ADAMTS2O95450 1211 aa14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 FLIIQ13045 1269 aa14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 KRT24Q2M2I5 525 aa14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 CABLES1Q8TDN4 633 aa14.12□□□□□ -0.15
TRAPPC9-202ENST00000438773 ERC2O15083 957 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 EXOC6BQ9Y2D4 811 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 VAMP4O75379 141 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 HOXC9P31274 260 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 SYNMO15061 1565 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 ROBO2Q9HCK4 1378 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 PLEKHG1Q9ULL1 1385 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 LRRCC1Q9C099 1032 aa14.11□□□□□ -0.15
TRAPPC9-202ENST00000438773 GOLGA6L4A6NEF3 574 aa14.1□□□□□ -0.15
TRAPPC9-202ENST00000438773 LMTK3Q96Q04 1460 aa14.1□□□□□ -0.15
TRAPPC9-202ENST00000438773 NEUROD6Q96NK8 337 aa14.1□□□□□ -0.15
TRAPPC9-202ENST00000438773 A2ML1A8K2U0 1454 aa14.09□□□□□ -0.15
TRAPPC9-202ENST00000438773 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-202ENST00000438773 ARHGAP45Q92619 1136 aa14.09□□□□□ -0.15
TRAPPC9-202ENST00000438773 IL1RAPL2Q9NP60 686 aa14.09□□□□□ -0.15
TRAPPC9-202ENST00000438773 CEP152O94986 1710 aa14.09□□□□□ -0.15
TRAPPC9-202ENST00000438773 PTPRCP08575 1304 aa14.09□□□□□ -0.15
TRAPPC9-202ENST00000438773 LMTK2Q8IWU2 1503 aa14.08□□□□□ -0.15
TRAPPC9-202ENST00000438773 ANXA1P04083 346 aa14.08□□□□□ -0.16
TRAPPC9-202ENST00000438773 RRAGDQ9NQL2 400 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-202ENST00000438773 KIDINS220Q9ULH0 1771 aa14.08□□□□□ -0.16
TRAPPC9-202ENST00000438773 IP6K1Q92551 441 aa14.08□□□□□ -0.16
TRAPPC9-202ENST00000438773 DBF4Q9UBU7 674 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-202ENST00000438773 MRPL50Q8N5N7 158 aaKnown RBP14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 SIL1Q9H173 461 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 RIMBP3CA6NJZ7 1639 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 RIMBP3BA6NNM3 1639 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 RIMBP3Q9UFD9 1639 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 FAM43AQ8N2R8 423 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 DIP2CQ9Y2E4 1556 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
TRAPPC9-202ENST00000438773 ZKSCAN1P17029 563 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 ZRSR1Q15695 479 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 PPRC1Q5VV67 1664 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 ADGRB3O60242 1522 aa14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 SBNO1A3KN83 1393 aa14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 FAM177BA6PVY3 158 aa14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 DNAAF4Q8WXU2 420 aa14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 SMARCA5O60264 1052 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-202ENST00000438773 NLRP1Q9C000 1473 aa14.05□□□□□ -0.16
TRAPPC9-202ENST00000438773 HTATSF1O43719 755 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-202ENST00000438773 CNTROBQ8N137 903 aa14.05□□□□□ -0.16
TRAPPC9-202ENST00000438773 KIF6Q6ZMV9 814 aa14.05□□□□□ -0.16
TRAPPC9-202ENST00000438773 CHMP5Q9NZZ3 219 aa14.05□□□□□ -0.16
TRAPPC9-202ENST00000438773 LAMC1P11047 1609 aa14.05□□□□□ -0.16
TRAPPC9-202ENST00000438773 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 MEIS3Q99687 375 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 AKAP4Q5JQC9 854 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
TRAPPC9-202ENST00000438773 LARP1Q6PKG0 1096 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-202ENST00000438773 ABCA6Q8N139 1617 aa14.03□□□□□ -0.16
TRAPPC9-202ENST00000438773 HDAC1Q13547 482 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC9-202ENST00000438773 LRRFIP1Q32MZ4 808 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms