RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CDCA7Q9BWT1 371 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P12-201ENST00000438745 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 RAD21O60216 631 aa7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 UBTFP17480 764 aaKnown RBP7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 LORP23490 312 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 RNF144AP50876 292 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 FNBP4Q8N3X1 1017 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 STK17AQ9UEE5 414 aa7.23□□□□□ -1.25
HMGB3P12-201ENST00000438745 H3BM21 787 aa7.22□□□□□ -1.25
HMGB3P12-201ENST00000438745 INSM1Q01101 510 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P12-201ENST00000438745 SLFNL1Q499Z3 407 aa7.22□□□□□ -1.25
HMGB3P12-201ENST00000438745 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P12-201ENST00000438745 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
HMGB3P12-201ENST00000438745 A0A1W2PRU2 124 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 FIGNL2A6NMB9 653 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 GPC1P35052 558 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 USP4Q13107 963 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 MAP7D1Q3KQU3 841 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 CYP2U1Q7Z449 544 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 RNF135Q8IUD6 432 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 WWC1Q8IX03 1113 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 SLC16A10Q8TF71 515 aa7.21□□□□□ -1.26
HMGB3P12-201ENST00000438745 SLC35F4A4IF30 521 aa7.2□□□□□ -1.26
HMGB3P12-201ENST00000438745 PPFIA3O75145 1194 aa7.2□□□□□ -1.26
HMGB3P12-201ENST00000438745 GNRH1P01148 92 aa7.2□□□□□ -1.26
HMGB3P12-201ENST00000438745 A6NJR5 290 aa7.19□□□□□ -1.26
HMGB3P12-201ENST00000438745 VSIG8P0DPA2 414 aa7.19□□□□□ -1.26
HMGB3P12-201ENST00000438745 PTSQ03393 145 aa7.19□□□□□ -1.26
HMGB3P12-201ENST00000438745 CLN3Q13286 438 aa7.19□□□□□ -1.26
HMGB3P12-201ENST00000438745 ADAMTS19Q8TE59 1207 aa7.19□□□□□ -1.26
HMGB3P12-201ENST00000438745 POLMQ9NP87 494 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P12-201ENST00000438745 HRH3Q9Y5N1 445 aa7.19□□□□□ -1.26
HMGB3P12-201ENST00000438745 POM121CA8CG34 1229 aa7.18□□□□□ -1.26
HMGB3P12-201ENST00000438745 PLPP7Q8NBV4 271 aa7.18□□□□□ -1.26
HMGB3P12-201ENST00000438745 NFATC2IPQ8NCF5 419 aa7.18□□□□□ -1.26
HMGB3P12-201ENST00000438745 CLUAP1Q96AJ1 413 aa7.18□□□□□ -1.26
HMGB3P12-201ENST00000438745 XAGE2Q96GT9 111 aa7.18□□□□□ -1.26
HMGB3P12-201ENST00000438745 GRIP2Q9C0E4 1043 aa7.18□□□□□ -1.26
HMGB3P12-201ENST00000438745 DOLKQ9UPQ8 538 aa7.18□□□□□ -1.26
HMGB3P12-201ENST00000438745 SENP3-EIF4A1A0A087X0R7 540 aa7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 LZTS3O60299 673 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 MYCP01106 439 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 LYSMD3Q7Z3D4 306 aa7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 NANOS1Q8WY41 292 aaKnown RBP7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 IRF7Q92985 503 aa7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 SIRT1Q96EB6 747 aa7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 ESYT1Q9BSJ8 1104 aa7.17□□□□□ -1.26
HMGB3P12-201ENST00000438745 IL2RAP01589 272 aa7.16□□□□□ -1.26
HMGB3P12-201ENST00000438745 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
HMGB3P12-201ENST00000438745 ESF1Q9H501 851 aaKnown RBP7.16□□□□□ -1.26
HMGB3P12-201ENST00000438745 HDGFL1Q5TGJ6 251 aa7.15□□□□□ -1.26
HMGB3P12-201ENST00000438745 ARHGEF10LQ9HCE6 1279 aa7.15□□□□□ -1.26
HMGB3P12-201ENST00000438745 SPATA31C2B4DYI2 1134 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 MEN1O00255 615 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 CENPCQ03188 943 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 WDR44Q5JSH3 913 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 PRICKLE2Q7Z3G6 844 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 PROSER2Q86WR7 435 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 ZSCAN1Q8NBB4 408 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 CNKSR1Q969H4 720 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 NLRP3Q96P20 1036 aa7.14□□□□□ -1.27
HMGB3P12-201ENST00000438745 WASLO00401 505 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P12-201ENST00000438745 OXLD1Q5BKU9 147 aa7.13□□□□□ -1.27
HMGB3P12-201ENST00000438745 FHDC1Q9C0D6 1143 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P12-201ENST00000438745 PCDHGA11Q9Y5H2 935 aa7.13□□□□□ -1.27
HMGB3P12-201ENST00000438745 SKIP12755 728 aa7.12□□□□□ -1.27
HMGB3P12-201ENST00000438745 SCNN1DP51172 638 aa7.12□□□□□ -1.27
HMGB3P12-201ENST00000438745 ESCO1Q5FWF5 840 aa7.12□□□□□ -1.27
HMGB3P12-201ENST00000438745 UCN2Q96RP3 112 aa7.12□□□□□ -1.27
HMGB3P12-201ENST00000438745 ETNK1Q9HBU6 452 aa7.12□□□□□ -1.27
HMGB3P12-201ENST00000438745 RAB6BQ9NRW1 208 aa7.12□□□□□ -1.27
HMGB3P12-201ENST00000438745 ITGA6P23229 1130 aa7.11□□□□□ -1.27
HMGB3P12-201ENST00000438745 POU4F2Q12837 409 aa7.11□□□□□ -1.27
HMGB3P12-201ENST00000438745 GPR161Q8N6U8 529 aaKnown RBP7.11□□□□□ -1.27
HMGB3P12-201ENST00000438745 STAU1O95793 577 aaKnown RBP7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 INHAP05111 366 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 EML3Q32P44 896 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 SLC27A3Q5K4L6 730 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 NBPF10Q6P3W6 841 aaKnown RBP7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 TBC1D9Q6ZT07 1266 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 PLEKHM2Q8IWE5 1019 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 NBPF15Q8N660 670 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 SLC4A9Q96Q91 983 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 DYRK1BQ9Y463 629 aa7.1□□□□□ -1.27
HMGB3P12-201ENST00000438745 TMEM229AB2RXF0 380 aa7.09□□□□□ -1.27
HMGB3P12-201ENST00000438745 RHOQP17081 205 aa7.09□□□□□ -1.27
HMGB3P12-201ENST00000438745 NCOA4Q13772 614 aa7.09□□□□□ -1.27
HMGB3P12-201ENST00000438745 USP17L5A8MUK1 530 aa7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 ZBTB7BO15156 539 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 ATP9BO43861 1147 aa7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 GDF10P55107 478 aa7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 PPARGC1BQ86YN6 1023 aaKnown RBP7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 VWA5B2Q8N398 1253 aa7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 GLMNQ92990 594 aa7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 GMCL1Q96IK5 515 aa7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 ZSCAN10Q96SZ4 725 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 CUEDC1Q9NWM3 386 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms