RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 TOGARAM1Q9Y4F4 1720 aa25.44■■□□□ 1.66
GTF3A-204ENST00000438571 USHBP1Q8N6Y0 703 aa25.44■■□□□ 1.66
GTF3A-204ENST00000438571 ITGB4P16144 1822 aa25.44■■□□□ 1.66
GTF3A-204ENST00000438571 NBPF6Q5VWK0 638 aa25.42■■□□□ 1.66
GTF3A-204ENST00000438571 NBPF4Q96M43 638 aa25.42■■□□□ 1.66
GTF3A-204ENST00000438571 PKD1L3Q7Z443 1732 aa25.41■■□□□ 1.66
GTF3A-204ENST00000438571 NSD3Q9BZ95 1437 aa25.41■■□□□ 1.66
GTF3A-204ENST00000438571 TAF1LQ8IZX4 1826 aa25.41■■□□□ 1.66
GTF3A-204ENST00000438571 KCNQ4P56696 695 aa25.4■■□□□ 1.66
GTF3A-204ENST00000438571 SGIP1Q9BQI5 828 aa25.4■■□□□ 1.66
GTF3A-204ENST00000438571 CARD14Q9BXL6 1004 aa25.39■■□□□ 1.66
GTF3A-204ENST00000438571 CHD4Q14839 1912 aa25.38■■□□□ 1.65
GTF3A-204ENST00000438571 PRIM1P49642 420 aaKnown RBP25.38■■□□□ 1.65
GTF3A-204ENST00000438571 SYTL4Q96C24 671 aaPredicted RBP25.38■■□□□ 1.65
GTF3A-204ENST00000438571 MTFR1LQ9H019 292 aa25.38■■□□□ 1.65
GTF3A-204ENST00000438571 C5P01031 1676 aa25.37■■□□□ 1.65
GTF3A-204ENST00000438571 HSP90AB2PQ58FF8 381 aa25.37■■□□□ 1.65
GTF3A-204ENST00000438571 ZCRB1Q8TBF4 217 aaKnown RBP25.37■■□□□ 1.65
GTF3A-204ENST00000438571 SMG6Q86US8 1419 aaKnown RBP25.37■■□□□ 1.65
GTF3A-204ENST00000438571 YY1P25490 414 aa25.36■■□□□ 1.65
GTF3A-204ENST00000438571 INSRP06213 1382 aa25.35■■□□□ 1.65
GTF3A-204ENST00000438571 FLT4P35916 1363 aa25.35■■□□□ 1.65
GTF3A-204ENST00000438571 AKT1S1Q96B36 256 aa25.35■■□□□ 1.65
GTF3A-204ENST00000438571 FHDC1Q9C0D6 1143 aaPredicted RBP25.35■■□□□ 1.65
GTF3A-204ENST00000438571 EMILIN1Q9Y6C2 1016 aa25.33■■□□□ 1.65
GTF3A-204ENST00000438571 UTRNP46939 3433 aa25.33■■□□□ 1.65
GTF3A-204ENST00000438571 CDCA8Q53HL2 280 aa25.32■■□□□ 1.64
GTF3A-204ENST00000438571 PNPLA7Q6ZV29 1317 aa25.32■■□□□ 1.64
GTF3A-204ENST00000438571 SYT17Q9BSW7 474 aa25.31■■□□□ 1.64
GTF3A-204ENST00000438571 PCGF6Q9BYE7 350 aa25.31■■□□□ 1.64
GTF3A-204ENST00000438571 SLC27A3Q5K4L6 730 aa25.3■■□□□ 1.64
GTF3A-204ENST00000438571 RAPGEF4Q8WZA2 1011 aa25.29■■□□□ 1.64
GTF3A-204ENST00000438571 KIF24Q5T7B8 1368 aa25.29■■□□□ 1.64
GTF3A-204ENST00000438571 TATP17735 454 aaPredicted RBP25.28■■□□□ 1.64
GTF3A-204ENST00000438571 NCAPD2Q15021 1401 aa25.28■■□□□ 1.64
GTF3A-204ENST00000438571 ARXQ96QS3 562 aa25.27■■□□□ 1.64
GTF3A-204ENST00000438571 DCAF8L1A6NGE4 600 aa25.26■■□□□ 1.63
GTF3A-204ENST00000438571 CGNL1Q0VF96 1302 aa25.26■■□□□ 1.63
GTF3A-204ENST00000438571 PCDH11XQ9BZA7 1347 aa25.24■■□□□ 1.63
GTF3A-204ENST00000438571 PCDH11YQ9BZA8 1340 aa25.24■■□□□ 1.63
GTF3A-204ENST00000438571 CCNL1Q9UK58 526 aaPredicted RBP25.24■■□□□ 1.63
GTF3A-204ENST00000438571 TIMELESSQ9UNS1 1208 aa25.24■■□□□ 1.63
GTF3A-204ENST00000438571 UBR3Q6ZT12 1888 aa25.23■■□□□ 1.63
GTF3A-204ENST00000438571 CYP27B1O15528 508 aa25.23■■□□□ 1.63
GTF3A-204ENST00000438571 POLR3GLQ9BT43 218 aa25.23■■□□□ 1.63
GTF3A-204ENST00000438571 C4BP0C0L5 1744 aa25.23■■□□□ 1.63
GTF3A-204ENST00000438571 CLSPNQ9HAW4 1339 aa25.22■■□□□ 1.63
GTF3A-204ENST00000438571 PPM1GO15355 546 aaPredicted RBP25.22■■□□□ 1.63
GTF3A-204ENST00000438571 TFCP2L1Q9NZI6 479 aa25.22■■□□□ 1.63
GTF3A-204ENST00000438571 MAP3K5Q99683 1374 aa25.21■■□□□ 1.63
GTF3A-204ENST00000438571 KLHL34Q8N239 644 aa25.18■■□□□ 1.62
GTF3A-204ENST00000438571 SLC16A10Q8TF71 515 aa25.18■■□□□ 1.62
GTF3A-204ENST00000438571 PALLDQ8WX93 1383 aa25.18■■□□□ 1.62
GTF3A-204ENST00000438571 MPRIPQ6WCQ1 1025 aa25.17■■□□□ 1.62
GTF3A-204ENST00000438571 WASHC2AQ641Q2 1341 aa25.16■■□□□ 1.62
GTF3A-204ENST00000438571 COL23A1Q86Y22 540 aaPredicted RBP25.16■■□□□ 1.62
GTF3A-204ENST00000438571 EYA1Q99502 592 aa25.16■■□□□ 1.62
GTF3A-204ENST00000438571 POLKQ9UBT6 870 aa25.16■■□□□ 1.62
GTF3A-204ENST00000438571 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
GTF3A-204ENST00000438571 TNNT2P45379 298 aaPredicted RBP25.14■■□□□ 1.62
GTF3A-204ENST00000438571 POLD1P28340 1107 aa25.13■■□□□ 1.61
GTF3A-204ENST00000438571 MSL1Q68DK7 614 aa25.12■■□□□ 1.61
GTF3A-204ENST00000438571 NLGN2Q8NFZ4 835 aa25.12■■□□□ 1.61
GTF3A-204ENST00000438571 GOLGB1Q14789 3259 aaKnown RBP25.12■■□□□ 1.61
GTF3A-204ENST00000438571 MSH5O43196 834 aa25.11■■□□□ 1.61
GTF3A-204ENST00000438571 EIF4A2Q14240 407 aaKnown RBP25.1■■□□□ 1.61
GTF3A-204ENST00000438571 AMIGO3Q86WK7 504 aa25.1■■□□□ 1.61
GTF3A-204ENST00000438571 VIRMAQ69YN4 1812 aaKnown RBP25.09■■□□□ 1.61
GTF3A-204ENST00000438571 EIF4G2P78344 907 aaKnown RBP eCLIP25.09■■□□□ 1.61
GTF3A-204ENST00000438571 PIGBQ92521 554 aa25.09■■□□□ 1.61
GTF3A-204ENST00000438571 NKX1-1Q15270 411 aaPredicted RBP25.08■■□□□ 1.61
GTF3A-204ENST00000438571 SMIM5Q71RC9 77 aa25.08■■□□□ 1.61
GTF3A-204ENST00000438571 ZNF784Q8NCA9 323 aaPredicted RBP25.08■■□□□ 1.61
GTF3A-204ENST00000438571 PANK3Q9H999 370 aa25.07■■□□□ 1.6
GTF3A-204ENST00000438571 SPG7Q9UQ90 795 aa25.07■■□□□ 1.6
GTF3A-204ENST00000438571 COL5A3P25940 1745 aaPredicted RBP25.06■■□□□ 1.6
GTF3A-204ENST00000438571 GPR162Q16538 588 aa25.05■■□□□ 1.6
GTF3A-204ENST00000438571 PHKG2P15735 406 aa25.04■■□□□ 1.6
GTF3A-204ENST00000438571 PELP1Q8IZL8 1130 aaKnown RBP25.04■■□□□ 1.6
GTF3A-204ENST00000438571 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
GTF3A-204ENST00000438571 IGSF1Q8N6C5 1336 aa25.03■■□□□ 1.6
GTF3A-204ENST00000438571 SMARCC1Q92922 1105 aaPredicted RBP25.02■■□□□ 1.6
GTF3A-204ENST00000438571 LINC00116Q8NCU8 138 aa25.01■■□□□ 1.59
GTF3A-204ENST00000438571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.01■■□□□ 1.592e-7■□□□□ 11.1
GTF3A-204ENST00000438571 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
GTF3A-204ENST00000438571 ZNF831Q5JPB2 1677 aa25.01■■□□□ 1.59
GTF3A-204ENST00000438571 MYH14Q7Z406 1995 aaKnown RBP25■■□□□ 1.59
GTF3A-204ENST00000438571 PHF14O94880 888 aa25■■□□□ 1.59
GTF3A-204ENST00000438571 IFNL2Q8IZJ0 200 aa25■■□□□ 1.59
GTF3A-204ENST00000438571 AK7Q96M32 723 aa25■■□□□ 1.59
GTF3A-204ENST00000438571 TMOD3Q9NYL9 352 aa25■■□□□ 1.59
GTF3A-204ENST00000438571 SCN11AQ9UI33 1791 aa25■■□□□ 1.59
GTF3A-204ENST00000438571 LOC102724428A0A0B4J2F2 783 aa24.99■■□□□ 1.59
GTF3A-204ENST00000438571 C4AP0C0L4 1744 aa24.99■■□□□ 1.59
GTF3A-204ENST00000438571 SIK1P57059 783 aa24.99■■□□□ 1.59
GTF3A-204ENST00000438571 YBX3P16989 372 aaKnown RBP eCLIP24.98■■□□□ 1.591e-8■■□□□ 14.2
GTF3A-204ENST00000438571 ITPK1Q13572 414 aa24.98■■□□□ 1.59
GTF3A-204ENST00000438571 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
GTF3A-204ENST00000438571 KDRP35968 1356 aa24.96■■□□□ 1.59
GTF3A-204ENST00000438571 KIAA1551Q9HCM1 1747 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms