RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.45■■□□□ 1.52e-20■■□□□ 13.3
HDAC6-208ENST00000438518 LRRC37A3O60309 1634 aa24.44■■□□□ 1.5
HDAC6-208ENST00000438518 AEBP1Q8IUX7 1158 aa24.44■■□□□ 1.5
HDAC6-208ENST00000438518 ADAMTS8Q9UP79 889 aa24.44■■□□□ 1.5
HDAC6-208ENST00000438518 RXRBP28702 533 aa24.42■■□□□ 1.5
HDAC6-208ENST00000438518 AMOTQ4VCS5 1084 aa24.42■■□□□ 1.5
HDAC6-208ENST00000438518 TNS2Q63HR2 1409 aa24.42■■□□□ 1.5
HDAC6-208ENST00000438518 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
HDAC6-208ENST00000438518 SHANK3Q9BYB0 1731 aa24.41■■□□□ 1.5
HDAC6-208ENST00000438518 MAPK8IP3Q9UPT6 1336 aa24.4■■□□□ 1.5
HDAC6-208ENST00000438518 FAM98CQ17RN3 349 aaKnown RBP24.4■■□□□ 1.5
HDAC6-208ENST00000438518 PLEKHO1Q53GL0 409 aaPredicted RBP24.39■■□□□ 1.49
HDAC6-208ENST00000438518 RUNDC1Q96C34 613 aa24.39■■□□□ 1.49
HDAC6-208ENST00000438518 PLEKHF1Q96S99 279 aa24.39■■□□□ 1.49
HDAC6-208ENST00000438518 SPG7Q9UQ90 795 aa24.39■■□□□ 1.49
HDAC6-208ENST00000438518 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
HDAC6-208ENST00000438518 DDB1Q16531 1140 aa24.37■■□□□ 1.49
HDAC6-208ENST00000438518 POTEAQ6S8J7 498 aa24.37■■□□□ 1.49
HDAC6-208ENST00000438518 EXOC5O00471 708 aa24.36■■□□□ 1.49
HDAC6-208ENST00000438518 GAS2L2Q8NHY3 880 aa24.36■■□□□ 1.49
HDAC6-208ENST00000438518 ZCRB1Q8TBF4 217 aaKnown RBP24.36■■□□□ 1.49
HDAC6-208ENST00000438518 PCDH11XQ9BZA7 1347 aa24.35■■□□□ 1.49
HDAC6-208ENST00000438518 PCDH11YQ9BZA8 1340 aa24.35■■□□□ 1.49
HDAC6-208ENST00000438518 A0A0G2JS52 829 aa24.33■■□□□ 1.49
HDAC6-208ENST00000438518 MYT1Q01538 1121 aa24.33■■□□□ 1.49
HDAC6-208ENST00000438518 SEPT12Q8IYM1 358 aa24.32■■□□□ 1.48
HDAC6-208ENST00000438518 BRWD3Q6RI45 1802 aa24.32■■□□□ 1.48
HDAC6-208ENST00000438518 RGS12O14924 1447 aa24.32■■□□□ 1.48
HDAC6-208ENST00000438518 NCBP3Q53F19 620 aaKnown RBP24.31■■□□□ 1.48
HDAC6-208ENST00000438518 DLG5Q8TDM6 1919 aa24.31■■□□□ 1.48
HDAC6-208ENST00000438518 MTHFSDQ2M296 383 aaKnown RBP24.3■■□□□ 1.48
HDAC6-208ENST00000438518 IFNL2Q8IZJ0 200 aa24.3■■□□□ 1.48
HDAC6-208ENST00000438518 PHACTR3Q96KR7 559 aa24.3■■□□□ 1.48
HDAC6-208ENST00000438518 HSP90AB1P08238 724 aaKnown RBP24.29■■□□□ 1.48
HDAC6-208ENST00000438518 PDE3BQ13370 1112 aa24.29■■□□□ 1.48
HDAC6-208ENST00000438518 AKAP4Q5JQC9 854 aa24.29■■□□□ 1.48
HDAC6-208ENST00000438518 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
HDAC6-208ENST00000438518 CCDC146Q8IYE0 955 aa24.29■■□□□ 1.48
HDAC6-208ENST00000438518 NGEFQ8N5V2 710 aa24.29■■□□□ 1.48
HDAC6-208ENST00000438518 NFE2L2Q16236 605 aa24.28■■□□□ 1.48
HDAC6-208ENST00000438518 ZNF530Q6P9A1 599 aaPredicted RBP24.28■■□□□ 1.48
HDAC6-208ENST00000438518 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
HDAC6-208ENST00000438518 ADAMTS7Q9UKP4 1686 aa24.27■■□□□ 1.48
HDAC6-208ENST00000438518 PHKG2P15735 406 aa24.27■■□□□ 1.48
HDAC6-208ENST00000438518 MAP3K5Q99683 1374 aa24.27■■□□□ 1.48
HDAC6-208ENST00000438518 BCL9O00512 1426 aa24.27■■□□□ 1.48
HDAC6-208ENST00000438518 HTATSF1O43719 755 aaKnown RBP24.26■■□□□ 1.47
HDAC6-208ENST00000438518 LMOD3Q0VAK6 560 aa24.26■■□□□ 1.47
HDAC6-208ENST00000438518 SCN11AQ9UI33 1791 aa24.26■■□□□ 1.47
HDAC6-208ENST00000438518 TMPOP42166 694 aaKnown RBP24.25■■□□□ 1.47
HDAC6-208ENST00000438518 NKX1-1Q15270 411 aaPredicted RBP24.25■■□□□ 1.47
HDAC6-208ENST00000438518 GNAT3A8MTJ3 354 aa24.24■■□□□ 1.47
HDAC6-208ENST00000438518 APAF1O14727 1248 aa24.24■■□□□ 1.47
HDAC6-208ENST00000438518 CYP27B1O15528 508 aa24.24■■□□□ 1.47
HDAC6-208ENST00000438518 KRT27Q7Z3Y8 459 aa24.24■■□□□ 1.47
HDAC6-208ENST00000438518 DDX54Q8TDD1 881 aaKnown RBP24.23■■□□□ 1.47
HDAC6-208ENST00000438518 RIPK4P57078 832 aa24.21■■□□□ 1.47
HDAC6-208ENST00000438518 RTF1Q92541 710 aaKnown RBP24.21■■□□□ 1.47
HDAC6-208ENST00000438518 DCAF5Q96JK2 942 aa24.21■■□□□ 1.47
HDAC6-208ENST00000438518 CCDC27Q2M243 656 aa24.2■■□□□ 1.46
HDAC6-208ENST00000438518 MARCH10Q8NA82 808 aaPredicted RBP24.2■■□□□ 1.46
HDAC6-208ENST00000438518 DOT1LQ8TEK3 1739 aa24.2■■□□□ 1.46
HDAC6-208ENST00000438518 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
HDAC6-208ENST00000438518 MRC1P22897 1456 aa24.18■■□□□ 1.46
HDAC6-208ENST00000438518 NHSQ6T4R5 1651 aa24.18■■□□□ 1.46
HDAC6-208ENST00000438518 SBF2Q86WG5 1849 aa24.17■■□□□ 1.46
HDAC6-208ENST00000438518 KDM6AO15550 1401 aaPredicted RBP24.17■■□□□ 1.46
HDAC6-208ENST00000438518 CEMIPQ8WUJ3 1361 aa24.16■■□□□ 1.46
HDAC6-208ENST00000438518 FAM196AQ6ZSG2 479 aa24.16■■□□□ 1.46
HDAC6-208ENST00000438518 ITGB4P16144 1822 aa24.15■■□□□ 1.46
HDAC6-208ENST00000438518 ERVV-2B6SEH9 535 aa24.15■■□□□ 1.46
HDAC6-208ENST00000438518 SIPA1L3O60292 1781 aaPredicted RBP24.15■■□□□ 1.46
HDAC6-208ENST00000438518 CALD1Q05682 793 aaKnown RBP24.14■■□□□ 1.45
HDAC6-208ENST00000438518 NEUROD2Q15784 382 aa24.14■■□□□ 1.45
HDAC6-208ENST00000438518 RRP7AQ9Y3A4 280 aaKnown RBP24.14■■□□□ 1.45
HDAC6-208ENST00000438518 RNMTO43148 476 aaKnown RBP24.13■■□□□ 1.45
HDAC6-208ENST00000438518 MPRIPQ6WCQ1 1025 aa24.13■■□□□ 1.45
HDAC6-208ENST00000438518 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
HDAC6-208ENST00000438518 IL17REQ8NFR9 667 aa24.11■■□□□ 1.45
HDAC6-208ENST00000438518 HNRNPUQ00839 825 aaKnown RBP eCLIP24.09■■□□□ 1.45
HDAC6-208ENST00000438518 TEFQ10587 303 aa24.09■■□□□ 1.45
HDAC6-208ENST00000438518 WWC1Q8IX03 1113 aa24.09■■□□□ 1.45
HDAC6-208ENST00000438518 SLC52A2Q9HAB3 445 aa24.09■■□□□ 1.45
HDAC6-208ENST00000438518 CABP4P57796 275 aa24.08■■□□□ 1.45
HDAC6-208ENST00000438518 MCM10Q7L590 875 aa24.08■■□□□ 1.45
HDAC6-208ENST00000438518 LGR6Q9HBX8 967 aa24.08■■□□□ 1.45
HDAC6-208ENST00000438518 WDR63Q8IWG1 891 aa24.07■■□□□ 1.44
HDAC6-208ENST00000438518 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
HDAC6-208ENST00000438518 IL16Q14005 1332 aa24.07■■□□□ 1.44
HDAC6-208ENST00000438518 PAPPAQ13219 1627 aa24.06■■□□□ 1.44
HDAC6-208ENST00000438518 TMOD3Q9NYL9 352 aa24.06■■□□□ 1.44
HDAC6-208ENST00000438518 ZNF521Q96K83 1311 aa24.06■■□□□ 1.44
HDAC6-208ENST00000438518 DCTN1Q14203 1278 aa24.05■■□□□ 1.44
HDAC6-208ENST00000438518 ZBED9Q6R2W3 1325 aa24.05■■□□□ 1.44
HDAC6-208ENST00000438518 BTAF1O14981 1849 aa24.05■■□□□ 1.44
HDAC6-208ENST00000438518 KDM3BQ7LBC6 1761 aa24.04■■□□□ 1.44
HDAC6-208ENST00000438518 FAM182BQ5T319 152 aa24.04■■□□□ 1.44
HDAC6-208ENST00000438518 BCL11BQ9C0K0 894 aaPredicted RBP24.04■■□□□ 1.44
HDAC6-208ENST00000438518 KAT6BQ8WYB5 2073 aa24.03■■□□□ 1.44
HDAC6-208ENST00000438518 PRIM1P49642 420 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms