RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 SRPK2P78362 688 aaKnown RBP13.5□□□□□ -0.25
RPE-210ENST00000438204 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
RPE-210ENST00000438204 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
RPE-210ENST00000438204 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
RPE-210ENST00000438204 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
RPE-210ENST00000438204 IL2RBP14784 551 aa13.49□□□□□ -0.25
RPE-210ENST00000438204 ADRA2BP18089 450 aa13.49□□□□□ -0.25
RPE-210ENST00000438204 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
RPE-210ENST00000438204 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
RPE-210ENST00000438204 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
RPE-210ENST00000438204 NLRP2Q9NX02 1062 aa13.48□□□□□ -0.25
RPE-210ENST00000438204 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
RPE-210ENST00000438204 ERBB3P21860 1342 aa13.47□□□□□ -0.25
RPE-210ENST00000438204 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
RPE-210ENST00000438204 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
RPE-210ENST00000438204 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
RPE-210ENST00000438204 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
RPE-210ENST00000438204 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
RPE-210ENST00000438204 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
RPE-210ENST00000438204 KIAA1210Q9ULL0 1709 aa13.44□□□□□ -0.26
RPE-210ENST00000438204 KIF13BQ9NQT8 1826 aa13.44□□□□□ -0.26
RPE-210ENST00000438204 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
RPE-210ENST00000438204 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
RPE-210ENST00000438204 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
RPE-210ENST00000438204 KCPQ6ZWJ8 1503 aa13.44□□□□□ -0.26
RPE-210ENST00000438204 TNRC6CQ9HCJ0 1690 aaKnown RBP13.44□□□□□ -0.26
RPE-210ENST00000438204 TTC21BQ7Z4L5 1316 aa13.43□□□□□ -0.26
RPE-210ENST00000438204 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
RPE-210ENST00000438204 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
RPE-210ENST00000438204 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
RPE-210ENST00000438204 SMIM5Q71RC9 77 aa13.42□□□□□ -0.26
RPE-210ENST00000438204 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
RPE-210ENST00000438204 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
RPE-210ENST00000438204 FAM208AQ9UK61 1670 aaKnown RBP13.42□□□□□ -0.26
RPE-210ENST00000438204 FSTL1Q12841 308 aa13.41□□□□□ -0.26
RPE-210ENST00000438204 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
RPE-210ENST00000438204 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
RPE-210ENST00000438204 USP47Q96K76 1375 aa13.39□□□□□ -0.27
RPE-210ENST00000438204 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
RPE-210ENST00000438204 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
RPE-210ENST00000438204 PHF14O94880 888 aa13.38□□□□□ -0.27
RPE-210ENST00000438204 BCS1LQ9Y276 419 aa13.38□□□□□ -0.27
RPE-210ENST00000438204 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
RPE-210ENST00000438204 MEGF6O75095 1541 aa13.37□□□□□ -0.27
RPE-210ENST00000438204 TTC21AQ8NDW8 1320 aa13.37□□□□□ -0.27
RPE-210ENST00000438204 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
RPE-210ENST00000438204 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
RPE-210ENST00000438204 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
RPE-210ENST00000438204 SBF1O95248 1867 aa13.36□□□□□ -0.27
RPE-210ENST00000438204 PLEKHG2Q9H7P9 1386 aa13.35□□□□□ -0.27
RPE-210ENST00000438204 ITGB4P16144 1822 aa13.35□□□□□ -0.27
RPE-210ENST00000438204 C9orf131Q5VYM1 1079 aa13.35□□□□□ -0.27
RPE-210ENST00000438204 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
RPE-210ENST00000438204 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
RPE-210ENST00000438204 PALLDQ8WX93 1383 aa13.33□□□□□ -0.27
RPE-210ENST00000438204 LTV1Q96GA3 475 aaPredicted RBP13.33□□□□□ -0.28
RPE-210ENST00000438204 AK7Q96M32 723 aa13.33□□□□□ -0.28
RPE-210ENST00000438204 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
RPE-210ENST00000438204 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
RPE-210ENST00000438204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.32□□□□□ -0.28
RPE-210ENST00000438204 A0A0G2JLW4 131 aa13.32□□□□□ -0.28
RPE-210ENST00000438204 SMC1BQ8NDV3 1235 aa13.32□□□□□ -0.28
RPE-210ENST00000438204 NME9Q86XW9 330 aa13.31□□□□□ -0.28
RPE-210ENST00000438204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.287e-7■□□□□ 9.5
RPE-210ENST00000438204 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
RPE-210ENST00000438204 FCHSD2O94868 740 aa13.3□□□□□ -0.28
RPE-210ENST00000438204 STAC3Q96MF2 364 aa13.3□□□□□ -0.28
RPE-210ENST00000438204 KDM2BQ8NHM5 1336 aa13.3□□□□□ -0.28
RPE-210ENST00000438204 FOXN1O15353 648 aa13.29□□□□□ -0.28
RPE-210ENST00000438204 MMP10P09238 476 aa13.29□□□□□ -0.28
RPE-210ENST00000438204 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
RPE-210ENST00000438204 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
RPE-210ENST00000438204 DPEP1P16444 411 aa13.28□□□□□ -0.28
RPE-210ENST00000438204 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
RPE-210ENST00000438204 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
RPE-210ENST00000438204 RNF181Q9P0P0 153 aa13.28□□□□□ -0.28
RPE-210ENST00000438204 NSD3Q9BZ95 1437 aa13.28□□□□□ -0.28
RPE-210ENST00000438204 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
RPE-210ENST00000438204 SSFA2P28290 1259 aa13.26□□□□□ -0.29
RPE-210ENST00000438204 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
RPE-210ENST00000438204 SBNO2Q9Y2G9 1366 aa13.26□□□□□ -0.29
RPE-210ENST00000438204 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
RPE-210ENST00000438204 RAB3GAP2Q9H2M9 1393 aa13.25□□□□□ -0.29
RPE-210ENST00000438204 TGFB2P61812 414 aa13.25□□□□□ -0.29
RPE-210ENST00000438204 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
RPE-210ENST00000438204 MKRN1Q9UHC7 482 aaKnown RBP13.25□□□□□ -0.29
RPE-210ENST00000438204 MPRIPQ6WCQ1 1025 aa13.24□□□□□ -0.29
RPE-210ENST00000438204 GNPATO15228 680 aa13.23□□□□□ -0.29
RPE-210ENST00000438204 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
RPE-210ENST00000438204 IP6K1Q92551 441 aa13.23□□□□□ -0.29
RPE-210ENST00000438204 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
RPE-210ENST00000438204 KCNA3P22001 575 aa13.22□□□□□ -0.29
RPE-210ENST00000438204 ABHD8Q96I13 439 aa13.22□□□□□ -0.29
RPE-210ENST00000438204 VIRMAQ69YN4 1812 aaKnown RBP13.22□□□□□ -0.29
RPE-210ENST00000438204 RASSF7Q02833 373 aa13.21□□□□□ -0.29
RPE-210ENST00000438204 DCAF5Q96JK2 942 aa13.21□□□□□ -0.29
RPE-210ENST00000438204 MLLT1Q03111 559 aaPredicted RBP13.19□□□□□ -0.3
RPE-210ENST00000438204 ITPK1Q13572 414 aa13.19□□□□□ -0.3
RPE-210ENST00000438204 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
RPE-210ENST00000438204 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms