RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
RPE-209ENST00000438191 NUDT16Q96DE0 195 aaKnown RBP13.9□□□□□ -0.18
RPE-209ENST00000438191 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
RPE-209ENST00000438191 USP54Q70EL1 1684 aa13.9□□□□□ -0.18
RPE-209ENST00000438191 SLIT3O75094 1523 aa13.89□□□□□ -0.19
RPE-209ENST00000438191 BCS1LQ9Y276 419 aa13.88□□□□□ -0.19
RPE-209ENST00000438191 N4BP2Q86UW6 1770 aaPredicted RBP13.88□□□□□ -0.19
RPE-209ENST00000438191 HSPA8P11142 646 aaKnown RBP13.87□□□□□ -0.19
RPE-209ENST00000438191 APLP2Q06481 763 aa13.87□□□□□ -0.19
RPE-209ENST00000438191 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
RPE-209ENST00000438191 KIF13BQ9NQT8 1826 aa13.86□□□□□ -0.19
RPE-209ENST00000438191 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
RPE-209ENST00000438191 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
RPE-209ENST00000438191 WBP1LQ9NX94 342 aa13.86□□□□□ -0.19
RPE-209ENST00000438191 CCNL1Q9UK58 526 aaPredicted RBP13.85□□□□□ -0.19
RPE-209ENST00000438191 CNTNAP1P78357 1384 aa13.84□□□□□ -0.19
RPE-209ENST00000438191 CPSF1Q10570 1443 aaKnown RBP13.84□□□□□ -0.19
RPE-209ENST00000438191 FLAD1Q8NFF5 587 aa13.84□□□□□ -0.19
RPE-209ENST00000438191 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
RPE-209ENST00000438191 BRCA1P38398 1863 aaKnown RBP13.83□□□□□ -0.2
RPE-209ENST00000438191 C5P01031 1676 aa13.83□□□□□ -0.2
RPE-209ENST00000438191 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
RPE-209ENST00000438191 PLEKHG3A1L390 1219 aa13.82□□□□□ -0.2
RPE-209ENST00000438191 RNF181Q9P0P0 153 aa13.82□□□□□ -0.2
RPE-209ENST00000438191 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
RPE-209ENST00000438191 SBF1O95248 1867 aa13.82□□□□□ -0.2
RPE-209ENST00000438191 NSD2O96028 1365 aa13.82□□□□□ -0.2
RPE-209ENST00000438191 VEGFAP15692 232 aaPredicted RBP13.81□□□□□ -0.2
RPE-209ENST00000438191 PRPF38BQ5VTL8 546 aaKnown RBP13.81□□□□□ -0.2
RPE-209ENST00000438191 CFAP44Q96MT7 982 aa13.81□□□□□ -0.2
RPE-209ENST00000438191 ERBB3P21860 1342 aa13.81□□□□□ -0.2
RPE-209ENST00000438191 FCHSD2O94868 740 aa13.8□□□□□ -0.2
RPE-209ENST00000438191 NLRP6P59044 892 aa13.8□□□□□ -0.2
RPE-209ENST00000438191 TGFB2P61812 414 aa13.8□□□□□ -0.2
RPE-209ENST00000438191 ARHGEF25Q86VW2 580 aa13.8□□□□□ -0.2
RPE-209ENST00000438191 DOT1LQ8TEK3 1739 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 TAF1LQ8IZX4 1826 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 A0A0G2JLW4 131 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 IL2RBP14784 551 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 VEGFBP49765 207 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 SMIM5Q71RC9 77 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
RPE-209ENST00000438191 ITGAEP38570 1179 aa13.78□□□□□ -0.2
RPE-209ENST00000438191 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
RPE-209ENST00000438191 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
RPE-209ENST00000438191 SYTL4Q96C24 671 aaPredicted RBP13.77□□□□□ -0.21
RPE-209ENST00000438191 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
RPE-209ENST00000438191 CDK19Q9BWU1 502 aa13.76□□□□□ -0.21
RPE-209ENST00000438191 UBR3Q6ZT12 1888 aa13.76□□□□□ -0.21
RPE-209ENST00000438191 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
RPE-209ENST00000438191 GLTPD2A6NH11 291 aa13.74□□□□□ -0.21
RPE-209ENST00000438191 DPEP1P16444 411 aa13.74□□□□□ -0.21
RPE-209ENST00000438191 ZC3H4Q9UPT8 1303 aaKnown RBP13.73□□□□□ -0.21
RPE-209ENST00000438191 POTECB2RU33 542 aa13.73□□□□□ -0.21
RPE-209ENST00000438191 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
RPE-209ENST00000438191 C4BP0C0L5 1744 aa13.73□□□□□ -0.21
RPE-209ENST00000438191 USP47Q96K76 1375 aa13.72□□□□□ -0.21
RPE-209ENST00000438191 DCAF5Q96JK2 942 aa13.72□□□□□ -0.21
RPE-209ENST00000438191 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
RPE-209ENST00000438191 PHF14O94880 888 aa13.7□□□□□ -0.22
RPE-209ENST00000438191 KCNA3P22001 575 aa13.7□□□□□ -0.22
RPE-209ENST00000438191 MAP2K1Q02750 393 aaPredicted RBP13.7□□□□□ -0.22
RPE-209ENST00000438191 MCOLN1Q9GZU1 580 aa13.7□□□□□ -0.22
RPE-209ENST00000438191 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
RPE-209ENST00000438191 MMP10P09238 476 aa13.69□□□□□ -0.22
RPE-209ENST00000438191 HMGB2P26583 209 aaKnown RBP13.69□□□□□ -0.22
RPE-209ENST00000438191 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
RPE-209ENST00000438191 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
RPE-209ENST00000438191 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
RPE-209ENST00000438191 AK7Q96M32 723 aa13.68□□□□□ -0.22
RPE-209ENST00000438191 NFAT5O94916 1531 aa13.68□□□□□ -0.22
RPE-209ENST00000438191 PASKQ96RG2 1323 aa13.67□□□□□ -0.22
RPE-209ENST00000438191 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
RPE-209ENST00000438191 TIAM2Q8IVF5 1701 aa13.67□□□□□ -0.22
RPE-209ENST00000438191 SOX12O15370 315 aa13.66□□□□□ -0.22
RPE-209ENST00000438191 PIM2Q9P1W9 311 aa13.66□□□□□ -0.22
RPE-209ENST00000438191 SSFA2P28290 1259 aa13.65□□□□□ -0.22
RPE-209ENST00000438191 TMEM88BA6NKF7 163 aa13.64□□□□□ -0.23
RPE-209ENST00000438191 DLL1O00548 723 aa13.64□□□□□ -0.23
RPE-209ENST00000438191 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
RPE-209ENST00000438191 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
RPE-209ENST00000438191 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
RPE-209ENST00000438191 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
RPE-209ENST00000438191 THSD7BQ9C0I4 1608 aa13.64□□□□□ -0.23
RPE-209ENST00000438191 CCDC88AQ3V6T2 1871 aa13.63□□□□□ -0.23
RPE-209ENST00000438191 RASSF10A6NK89 507 aa13.63□□□□□ -0.23
RPE-209ENST00000438191 RASSF7Q02833 373 aa13.63□□□□□ -0.23
RPE-209ENST00000438191 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
RPE-209ENST00000438191 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
RPE-209ENST00000438191 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
RPE-209ENST00000438191 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
RPE-209ENST00000438191 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
RPE-209ENST00000438191 LMNB1P20700 586 aa13.61□□□□□ -0.23
RPE-209ENST00000438191 SOX10P56693 466 aa13.61□□□□□ -0.23
RPE-209ENST00000438191 HABP4Q5JVS0 413 aaKnown RBP13.61□□□□□ -0.23
RPE-209ENST00000438191 CASP8AP2Q9UKL3 1982 aa13.6□□□□□ -0.23
RPE-209ENST00000438191 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
RPE-209ENST00000438191 LTBP1Q14766 1721 aa13.59□□□□□ -0.23
RPE-209ENST00000438191 DGKZQ13574 1117 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms