RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 ANKRD26Q9UPS8 1709 aa8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
PNKDP1-201ENST00000435914 INSRP06213 1382 aa8.66□□□□□ -1.02
PNKDP1-201ENST00000435914 KIF24Q5T7B8 1368 aa8.66□□□□□ -1.02
PNKDP1-201ENST00000435914 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
PNKDP1-201ENST00000435914 AMPHP49418 695 aa8.66□□□□□ -1.02
PNKDP1-201ENST00000435914 AKT1S1Q96B36 256 aa8.66□□□□□ -1.02
PNKDP1-201ENST00000435914 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.02
PNKDP1-201ENST00000435914 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
PNKDP1-201ENST00000435914 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
PNKDP1-201ENST00000435914 MTFR1LQ9H019 292 aa8.65□□□□□ -1.02
PNKDP1-201ENST00000435914 PPP1R1BQ9UD71 204 aaPredicted RBP8.65□□□□□ -1.02
PNKDP1-201ENST00000435914 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.02
PNKDP1-201ENST00000435914 NSD3Q9BZ95 1437 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 FLT4P35916 1363 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 MAP3K5Q99683 1374 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 CGNL1Q0VF96 1302 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 TOGARAM1Q9Y4F4 1720 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 PRIM1P49642 420 aaKnown RBP8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 CDCA8Q53HL2 280 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 SLC27A3Q5K4L6 730 aa8.64□□□□□ -1.03
PNKDP1-201ENST00000435914 USHBP1Q8N6Y0 703 aa8.63□□□□□ -1.03
PNKDP1-201ENST00000435914 SYT17Q9BSW7 474 aa8.63□□□□□ -1.03
PNKDP1-201ENST00000435914 PNPLA7Q6ZV29 1317 aa8.62□□□□□ -1.03
PNKDP1-201ENST00000435914 MAP2P11137 1827 aaKnown RBP8.62□□□□□ -1.03
PNKDP1-201ENST00000435914 KCNQ4P56696 695 aa8.62□□□□□ -1.03
PNKDP1-201ENST00000435914 FHDC1Q9C0D6 1143 aaPredicted RBP8.62□□□□□ -1.03
PNKDP1-201ENST00000435914 EMILIN1Q9Y6C2 1016 aa8.62□□□□□ -1.03
PNKDP1-201ENST00000435914 GOLGB1Q14789 3259 aaKnown RBP8.62□□□□□ -1.03
PNKDP1-201ENST00000435914 SMG6Q86US8 1419 aaKnown RBP8.62□□□□□ -1.03
PNKDP1-201ENST00000435914 ITGB4P16144 1822 aa8.61□□□□□ -1.03
PNKDP1-201ENST00000435914 TAF1LQ8IZX4 1826 aa8.61□□□□□ -1.03
PNKDP1-201ENST00000435914 CYP27B1O15528 508 aa8.61□□□□□ -1.03
PNKDP1-201ENST00000435914 YY1P25490 414 aa8.61□□□□□ -1.03
PNKDP1-201ENST00000435914 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
PNKDP1-201ENST00000435914 WASHC2AQ641Q2 1341 aa8.6□□□□□ -1.03
PNKDP1-201ENST00000435914 C5P01031 1676 aa8.6□□□□□ -1.03
PNKDP1-201ENST00000435914 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
PNKDP1-201ENST00000435914 RAPGEF4Q8WZA2 1011 aa8.6□□□□□ -1.03
PNKDP1-201ENST00000435914 SYTL4Q96C24 671 aaPredicted RBP8.6□□□□□ -1.03
PNKDP1-201ENST00000435914 ARXQ96QS3 562 aa8.6□□□□□ -1.03
PNKDP1-201ENST00000435914 PCDH11XQ9BZA7 1347 aa8.59□□□□□ -1.03
PNKDP1-201ENST00000435914 PCDH11YQ9BZA8 1340 aa8.59□□□□□ -1.03
PNKDP1-201ENST00000435914 CHD4Q14839 1912 aa8.59□□□□□ -1.03
PNKDP1-201ENST00000435914 NKX1-1Q15270 411 aaPredicted RBP8.59□□□□□ -1.03
PNKDP1-201ENST00000435914 POLKQ9UBT6 870 aa8.59□□□□□ -1.03
PNKDP1-201ENST00000435914 EYA1Q99502 592 aa8.58□□□□□ -1.04
PNKDP1-201ENST00000435914 CCNL1Q9UK58 526 aaPredicted RBP8.58□□□□□ -1.04
PNKDP1-201ENST00000435914 COL23A1Q86Y22 540 aaPredicted RBP8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 PCGF6Q9BYE7 350 aa8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 UBR3Q6ZT12 1888 aa8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 PALLDQ8WX93 1383 aa8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 PLEKHG2Q9H7P9 1386 aa8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
PNKDP1-201ENST00000435914 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
PNKDP1-201ENST00000435914 EIF4A2Q14240 407 aaKnown RBP8.56□□□□□ -1.04
PNKDP1-201ENST00000435914 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
PNKDP1-201ENST00000435914 PIGBQ92521 554 aa8.56□□□□□ -1.04
PNKDP1-201ENST00000435914 DCAF8L1A6NGE4 600 aa8.55□□□□□ -1.04
PNKDP1-201ENST00000435914 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
PNKDP1-201ENST00000435914 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
PNKDP1-201ENST00000435914 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
PNKDP1-201ENST00000435914 PPM1GO15355 546 aaPredicted RBP8.54□□□□□ -1.04
PNKDP1-201ENST00000435914 PHKG2P15735 406 aa8.54□□□□□ -1.04
PNKDP1-201ENST00000435914 POLD1P28340 1107 aa8.54□□□□□ -1.04
PNKDP1-201ENST00000435914 ZNF784Q8NCA9 323 aaPredicted RBP8.54□□□□□ -1.04
PNKDP1-201ENST00000435914 NLGN2Q8NFZ4 835 aa8.54□□□□□ -1.04
PNKDP1-201ENST00000435914 PANK3Q9H999 370 aa8.54□□□□□ -1.04
PNKDP1-201ENST00000435914 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
PNKDP1-201ENST00000435914 SMARCC1Q92922 1105 aaPredicted RBP8.53□□□□□ -1.04
PNKDP1-201ENST00000435914 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
PNKDP1-201ENST00000435914 KDRP35968 1356 aa8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 SIK1P57059 783 aa8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 ITPK1Q13572 414 aa8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 IFNL2Q8IZJ0 200 aa8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 LINC00116Q8NCU8 138 aa8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 ASAP1Q9ULH1 1129 aa8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 KDM6AO15550 1401 aaPredicted RBP8.52□□□□□ -1.05
PNKDP1-201ENST00000435914 COL5A3P25940 1745 aaPredicted RBP8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 YBX3P16989 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 HMGB2P26583 209 aaKnown RBP8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 TNNT2P45379 298 aaPredicted RBP8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 MSL1Q68DK7 614 aa8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 SMIM5Q71RC9 77 aa8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 FLAD1Q8NFF5 587 aa8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 SLC4A9Q96Q91 983 aa8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 ATG3Q9NT62 314 aa8.51□□□□□ -1.05
PNKDP1-201ENST00000435914 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.5□□□□□ -1.05
PNKDP1-201ENST00000435914 SSFA2P28290 1259 aa8.5□□□□□ -1.05
PNKDP1-201ENST00000435914 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
PNKDP1-201ENST00000435914 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
PNKDP1-201ENST00000435914 TMOD3Q9NYL9 352 aa8.5□□□□□ -1.05
PNKDP1-201ENST00000435914 CICQ96RK0 1608 aaPredicted RBP8.5□□□□□ -1.05
PNKDP1-201ENST00000435914 MYH14Q7Z406 1995 aaKnown RBP8.5□□□□□ -1.05
PNKDP1-201ENST00000435914 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms