RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 SHANK3Q9BYB0 1731 aa27.81■■■□□ 2.04
LMBR1-208ENST00000434278 ZCRB1Q8TBF4 217 aaKnown RBP27.8■■■□□ 2.04
LMBR1-208ENST00000434278 LRP5O75197 1615 aa27.8■■■□□ 2.04
LMBR1-208ENST00000434278 WASHC2AQ641Q2 1341 aa27.79■■■□□ 2.04
LMBR1-208ENST00000434278 TNNT2P45379 298 aaPredicted RBP27.79■■■□□ 2.04
LMBR1-208ENST00000434278 RAPGEF4Q8WZA2 1011 aa27.77■■■□□ 2.04
LMBR1-208ENST00000434278 TXNRD1Q16881 649 aa27.76■■■□□ 2.03
LMBR1-208ENST00000434278 BTAF1O14981 1849 aa27.76■■■□□ 2.03
LMBR1-208ENST00000434278 NSD2O96028 1365 aa27.75■■■□□ 2.03
LMBR1-208ENST00000434278 TATP17735 454 aaPredicted RBP27.75■■■□□ 2.03
LMBR1-208ENST00000434278 ANO8Q9HCE9 1232 aaPredicted RBP27.74■■■□□ 2.03
LMBR1-208ENST00000434278 KAT6BQ8WYB5 2073 aa27.74■■■□□ 2.03
LMBR1-208ENST00000434278 KNSTRNQ9Y448 316 aa27.72■■■□□ 2.03
LMBR1-208ENST00000434278 NCAPD2Q15021 1401 aa27.72■■■□□ 2.03
LMBR1-208ENST00000434278 DOT1LQ8TEK3 1739 aa27.71■■■□□ 2.03
LMBR1-208ENST00000434278 EYA1Q99502 592 aa27.7■■■□□ 2.02
LMBR1-208ENST00000434278 MORC1Q86VD1 984 aa27.69■■■□□ 2.02
LMBR1-208ENST00000434278 PRIM1P49642 420 aaKnown RBP27.68■■■□□ 2.02
LMBR1-208ENST00000434278 EIF4A2Q14240 407 aaKnown RBP27.68■■■□□ 2.02
LMBR1-208ENST00000434278 AMER1Q5JTC6 1135 aaPredicted RBP27.67■■■□□ 2.02
LMBR1-208ENST00000434278 SYTL4Q96C24 671 aaPredicted RBP27.67■■■□□ 2.02
LMBR1-208ENST00000434278 PCDH11XQ9BZA7 1347 aa27.65■■■□□ 2.02
LMBR1-208ENST00000434278 PCDH11YQ9BZA8 1340 aa27.65■■■□□ 2.02
LMBR1-208ENST00000434278 PKD1L3Q7Z443 1732 aa27.64■■■□□ 2.02
LMBR1-208ENST00000434278 CYP27B1O15528 508 aa27.64■■■□□ 2.02
LMBR1-208ENST00000434278 PER1O15534 1290 aaPredicted RBP27.63■■■□□ 2.01
LMBR1-208ENST00000434278 STK32BQ9NY57 414 aa27.63■■■□□ 2.01
LMBR1-208ENST00000434278 SLC15A2Q16348 729 aa27.62■■■□□ 2.01
LMBR1-208ENST00000434278 LRRC4BQ9NT99 713 aa27.62■■■□□ 2.01
LMBR1-208ENST00000434278 PAPPAQ13219 1627 aa27.62■■■□□ 2.01
LMBR1-208ENST00000434278 CASZ1Q86V15 1759 aa27.61■■■□□ 2.01
LMBR1-208ENST00000434278 PDGFDQ9GZP0 370 aaPredicted RBP27.61■■■□□ 2.01
LMBR1-208ENST00000434278 IGSF1Q8N6C5 1336 aa27.58■■■□□ 2.01
LMBR1-208ENST00000434278 SPG7Q9UQ90 795 aa27.57■■■□□ 2
LMBR1-208ENST00000434278 TOGARAM1Q9Y4F4 1720 aa27.56■■■□□ 2
LMBR1-208ENST00000434278 LY75O60449 1722 aa27.55■■■□□ 2
LMBR1-208ENST00000434278 SLC27A3Q5K4L6 730 aa27.55■■■□□ 2
LMBR1-208ENST00000434278 SPON1Q9HCB6 807 aa27.55■■■□□ 2
LMBR1-208ENST00000434278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.55■■■□□ 22e-7■□□□□ 9.4
LMBR1-208ENST00000434278 KCNQ4P56696 695 aa27.54■■■□□ 2
LMBR1-208ENST00000434278 NKX1-1Q15270 411 aaPredicted RBP27.54■■■□□ 2
LMBR1-208ENST00000434278 ZNF827Q17R98 1081 aa27.54■■■□□ 2
LMBR1-208ENST00000434278 CC2D1BQ5T0F9 858 aaKnown RBP27.53■■■□□ 2
LMBR1-208ENST00000434278 ZBTB7AO95365 584 aa27.51■■□□□ 1.99
LMBR1-208ENST00000434278 MPRIPQ6WCQ1 1025 aa27.51■■□□□ 1.99
LMBR1-208ENST00000434278 AKT1S1Q96B36 256 aa27.51■■□□□ 1.99
LMBR1-208ENST00000434278 ITGB4P16144 1822 aa27.51■■□□□ 1.99
LMBR1-208ENST00000434278 PHKG2P15735 406 aa27.5■■□□□ 1.99
LMBR1-208ENST00000434278 IL13P35225 146 aa27.49■■□□□ 1.99
LMBR1-208ENST00000434278 AEBP1Q8IUX7 1158 aa27.49■■□□□ 1.99
LMBR1-208ENST00000434278 PLEKHG2Q9H7P9 1386 aa27.48■■□□□ 1.99
LMBR1-208ENST00000434278 MTHFSP49914 203 aa27.48■■□□□ 1.99
LMBR1-208ENST00000434278 IFNL2Q8IZJ0 200 aa27.48■■□□□ 1.99
LMBR1-208ENST00000434278 CCNL1Q9UK58 526 aaPredicted RBP27.48■■□□□ 1.99
LMBR1-208ENST00000434278 NPC1L1Q9UHC9 1359 aa27.47■■□□□ 1.99
LMBR1-208ENST00000434278 PIGBQ92521 554 aa27.46■■□□□ 1.99
LMBR1-208ENST00000434278 ATF5Q9Y2D1 282 aaPredicted RBP27.46■■□□□ 1.99
LMBR1-208ENST00000434278 CNGB1Q14028 1251 aaPredicted RBP27.45■■□□□ 1.98
LMBR1-208ENST00000434278 SULT6B1Q6IMI4 303 aa27.44■■□□□ 1.98
LMBR1-208ENST00000434278 PPP1R1BQ9UD71 204 aaPredicted RBP27.44■■□□□ 1.98
LMBR1-208ENST00000434278 PALLDQ8WX93 1383 aa27.44■■□□□ 1.98
LMBR1-208ENST00000434278 PTGER2P43116 358 aa27.43■■□□□ 1.98
LMBR1-208ENST00000434278 PLEKHO1Q53GL0 409 aaPredicted RBP27.43■■□□□ 1.98
LMBR1-208ENST00000434278 QSER1Q2KHR3 1735 aa27.42■■□□□ 1.98
LMBR1-208ENST00000434278 MTFR1LQ9H019 292 aa27.42■■□□□ 1.98
LMBR1-208ENST00000434278 KDRP35968 1356 aa27.42■■□□□ 1.98
LMBR1-208ENST00000434278 TUBGCP6Q96RT7 1819 aa27.41■■□□□ 1.98
LMBR1-208ENST00000434278 PNPLA7Q6ZV29 1317 aa27.41■■□□□ 1.98
LMBR1-208ENST00000434278 TMOD3Q9NYL9 352 aa27.4■■□□□ 1.98
LMBR1-208ENST00000434278 TFCP2L1Q9NZI6 479 aa27.4■■□□□ 1.98
LMBR1-208ENST00000434278 AMOTQ4VCS5 1084 aa27.39■■□□□ 1.98
LMBR1-208ENST00000434278 SMARCC1Q92922 1105 aaPredicted RBP27.39■■□□□ 1.98
LMBR1-208ENST00000434278 C5P01031 1676 aa27.38■■□□□ 1.97
LMBR1-208ENST00000434278 ZNF530Q6P9A1 599 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-208ENST00000434278 SGIP1Q9BQI5 828 aa27.38■■□□□ 1.97
LMBR1-208ENST00000434278 TAF1LQ8IZX4 1826 aa27.36■■□□□ 1.97
LMBR1-208ENST00000434278 KDM6AO15550 1401 aaPredicted RBP27.35■■□□□ 1.97
LMBR1-208ENST00000434278 DIAPH1O60610 1272 aaKnown RBP27.35■■□□□ 1.97
LMBR1-208ENST00000434278 DCAF5Q96JK2 942 aa27.35■■□□□ 1.97
LMBR1-208ENST00000434278 ASAP1Q9ULH1 1129 aa27.35■■□□□ 1.97
LMBR1-208ENST00000434278 HSP90AB1P08238 724 aaKnown RBP27.34■■□□□ 1.97
LMBR1-208ENST00000434278 COL3A1P02461 1466 aaPredicted RBP27.33■■□□□ 1.97
LMBR1-208ENST00000434278 ERVV-2B6SEH9 535 aa27.33■■□□□ 1.97
LMBR1-208ENST00000434278 HMOX1P09601 288 aa27.33■■□□□ 1.97
LMBR1-208ENST00000434278 ATG3Q9NT62 314 aa27.33■■□□□ 1.97
LMBR1-208ENST00000434278 SLC16A10Q8TF71 515 aa27.32■■□□□ 1.96
LMBR1-208ENST00000434278 C1orf141Q5JVX7 400 aa27.31■■□□□ 1.96
LMBR1-208ENST00000434278 LOC102724428A0A0B4J2F2 783 aa27.3■■□□□ 1.96
LMBR1-208ENST00000434278 SIK1P57059 783 aa27.3■■□□□ 1.96
LMBR1-208ENST00000434278 COL23A1Q86Y22 540 aaPredicted RBP27.3■■□□□ 1.96
LMBR1-208ENST00000434278 C4BP0C0L5 1744 aa27.3■■□□□ 1.96
LMBR1-208ENST00000434278 COL24A1Q17RW2 1714 aa27.28■■□□□ 1.96
LMBR1-208ENST00000434278 HMGB2P26583 209 aaKnown RBP27.27■■□□□ 1.96
LMBR1-208ENST00000434278 CABP4P57796 275 aa27.26■■□□□ 1.95
LMBR1-208ENST00000434278 ITPK1Q13572 414 aa27.26■■□□□ 1.95
LMBR1-208ENST00000434278 LINC00116Q8NCU8 138 aa27.26■■□□□ 1.95
LMBR1-208ENST00000434278 ARXQ96QS3 562 aa27.26■■□□□ 1.95
LMBR1-208ENST00000434278 FHDC1Q9C0D6 1143 aaPredicted RBP27.26■■□□□ 1.95
LMBR1-208ENST00000434278 MSH5O43196 834 aa27.25■■□□□ 1.95
LMBR1-208ENST00000434278 ATP6V1AP38606 617 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms