RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
EDEM1-202ENST00000434243 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
EDEM1-202ENST00000434243 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
EDEM1-202ENST00000434243 MEGF6O75095 1541 aa18.36■□□□□ 0.53
EDEM1-202ENST00000434243 FAM208AQ9UK61 1670 aaKnown RBP18.36■□□□□ 0.53
EDEM1-202ENST00000434243 NHSQ6T4R5 1651 aa18.35■□□□□ 0.53
EDEM1-202ENST00000434243 KIF24Q5T7B8 1368 aa18.35■□□□□ 0.53
EDEM1-202ENST00000434243 PANK3Q9H999 370 aa18.35■□□□□ 0.53
EDEM1-202ENST00000434243 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
EDEM1-202ENST00000434243 MYOM1P52179 1685 aa18.34■□□□□ 0.53
EDEM1-202ENST00000434243 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
EDEM1-202ENST00000434243 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
EDEM1-202ENST00000434243 KCNQ4P56696 695 aa18.31■□□□□ 0.52
EDEM1-202ENST00000434243 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
EDEM1-202ENST00000434243 POLKQ9UBT6 870 aa18.31■□□□□ 0.52
EDEM1-202ENST00000434243 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
EDEM1-202ENST00000434243 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
EDEM1-202ENST00000434243 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
EDEM1-202ENST00000434243 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
EDEM1-202ENST00000434243 ZNF827Q17R98 1081 aa18.29■□□□□ 0.52
EDEM1-202ENST00000434243 MTFR1LQ9H019 292 aa18.29■□□□□ 0.52
EDEM1-202ENST00000434243 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
EDEM1-202ENST00000434243 CCNL1Q9UK58 526 aaPredicted RBP18.28■□□□□ 0.52
EDEM1-202ENST00000434243 BTAF1O14981 1849 aa18.28■□□□□ 0.52
EDEM1-202ENST00000434243 EYA1Q99502 592 aa18.27■□□□□ 0.52
EDEM1-202ENST00000434243 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
EDEM1-202ENST00000434243 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
EDEM1-202ENST00000434243 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.51
EDEM1-202ENST00000434243 CYP27B1O15528 508 aa18.26■□□□□ 0.51
EDEM1-202ENST00000434243 PTGER2P43116 358 aa18.26■□□□□ 0.51
EDEM1-202ENST00000434243 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
EDEM1-202ENST00000434243 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
EDEM1-202ENST00000434243 AKT1S1Q96B36 256 aa18.26■□□□□ 0.51
EDEM1-202ENST00000434243 NSD2O96028 1365 aa18.26■□□□□ 0.51
EDEM1-202ENST00000434243 EIF4A2Q14240 407 aaKnown RBP18.25■□□□□ 0.51
EDEM1-202ENST00000434243 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
EDEM1-202ENST00000434243 CASZ1Q86V15 1759 aa18.24■□□□□ 0.51
EDEM1-202ENST00000434243 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
EDEM1-202ENST00000434243 MSH5O43196 834 aa18.22■□□□□ 0.51
EDEM1-202ENST00000434243 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
EDEM1-202ENST00000434243 SHANK3Q9BYB0 1731 aa18.2■□□□□ 0.5
EDEM1-202ENST00000434243 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
EDEM1-202ENST00000434243 ARXQ96QS3 562 aa18.2■□□□□ 0.5
EDEM1-202ENST00000434243 FHDC1Q9C0D6 1143 aaPredicted RBP18.2■□□□□ 0.5
EDEM1-202ENST00000434243 KIF7Q2M1P5 1343 aa18.2■□□□□ 0.5
EDEM1-202ENST00000434243 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
EDEM1-202ENST00000434243 IFNL2Q8IZJ0 200 aa18.19■□□□□ 0.5
EDEM1-202ENST00000434243 SLC16A10Q8TF71 515 aa18.19■□□□□ 0.5
EDEM1-202ENST00000434243 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
EDEM1-202ENST00000434243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.19■□□□□ 0.52e-7■■□□□ 12.1
EDEM1-202ENST00000434243 NCAPD2Q15021 1401 aa18.18■□□□□ 0.5
EDEM1-202ENST00000434243 POLD1P28340 1107 aa18.18■□□□□ 0.5
EDEM1-202ENST00000434243 NKX1-1Q15270 411 aaPredicted RBP18.18■□□□□ 0.5
EDEM1-202ENST00000434243 KLHL34Q8N239 644 aa18.18■□□□□ 0.5
EDEM1-202ENST00000434243 PIGBQ92521 554 aa18.18■□□□□ 0.5
EDEM1-202ENST00000434243 SGIP1Q9BQI5 828 aa18.18■□□□□ 0.5
EDEM1-202ENST00000434243 SYT17Q9BSW7 474 aa18.18■□□□□ 0.5
EDEM1-202ENST00000434243 PHKG2P15735 406 aa18.17■□□□□ 0.5
EDEM1-202ENST00000434243 TMOD3Q9NYL9 352 aa18.17■□□□□ 0.5
EDEM1-202ENST00000434243 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
EDEM1-202ENST00000434243 YY1P25490 414 aa18.16■□□□□ 0.5
EDEM1-202ENST00000434243 HMGB2P26583 209 aaKnown RBP18.16■□□□□ 0.5
EDEM1-202ENST00000434243 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
EDEM1-202ENST00000434243 ANKRD26Q9UPS8 1709 aa18.15■□□□□ 0.5
EDEM1-202ENST00000434243 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
EDEM1-202ENST00000434243 PLEKHO1Q53GL0 409 aaPredicted RBP18.14■□□□□ 0.49
EDEM1-202ENST00000434243 COL23A1Q86Y22 540 aaPredicted RBP18.14■□□□□ 0.49
EDEM1-202ENST00000434243 AMER1Q5JTC6 1135 aaPredicted RBP18.13■□□□□ 0.49
EDEM1-202ENST00000434243 AK7Q96M32 723 aa18.13■□□□□ 0.49
EDEM1-202ENST00000434243 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
EDEM1-202ENST00000434243 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
EDEM1-202ENST00000434243 AMOTQ4VCS5 1084 aa18.11■□□□□ 0.49
EDEM1-202ENST00000434243 MSL1Q68DK7 614 aa18.11■□□□□ 0.49
EDEM1-202ENST00000434243 SULT6B1Q6IMI4 303 aa18.11■□□□□ 0.49
EDEM1-202ENST00000434243 ZNF530Q6P9A1 599 aaPredicted RBP18.11■□□□□ 0.49
EDEM1-202ENST00000434243 AEBP1Q8IUX7 1158 aa18.11■□□□□ 0.49
EDEM1-202ENST00000434243 ASAP1Q9ULH1 1129 aa18.11■□□□□ 0.49
EDEM1-202ENST00000434243 LY75O60449 1722 aa18.11■□□□□ 0.49
EDEM1-202ENST00000434243 PKD1L3Q7Z443 1732 aa18.11■□□□□ 0.49
EDEM1-202ENST00000434243 LOC102724428A0A0B4J2F2 783 aa18.1■□□□□ 0.49
EDEM1-202ENST00000434243 SIK1P57059 783 aa18.1■□□□□ 0.49
EDEM1-202ENST00000434243 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
EDEM1-202ENST00000434243 PHF14O94880 888 aa18.09■□□□□ 0.49
EDEM1-202ENST00000434243 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
EDEM1-202ENST00000434243 MTHFSP49914 203 aa18.09■□□□□ 0.49
EDEM1-202ENST00000434243 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
EDEM1-202ENST00000434243 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
EDEM1-202ENST00000434243 IL13P35225 146 aa18.08■□□□□ 0.48
EDEM1-202ENST00000434243 ATG3Q9NT62 314 aa18.08■□□□□ 0.48
EDEM1-202ENST00000434243 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
EDEM1-202ENST00000434243 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
EDEM1-202ENST00000434243 PER1O15534 1290 aaPredicted RBP18.07■□□□□ 0.48
EDEM1-202ENST00000434243 CABP4P57796 275 aa18.07■□□□□ 0.48
EDEM1-202ENST00000434243 GPR162Q16538 588 aa18.07■□□□□ 0.48
EDEM1-202ENST00000434243 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
EDEM1-202ENST00000434243 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
EDEM1-202ENST00000434243 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
EDEM1-202ENST00000434243 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
EDEM1-202ENST00000434243 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
EDEM1-202ENST00000434243 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms