RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 FCHSD2O94868 740 aa20.39■□□□□ 0.85
CNOT9-205ENST00000433439 SEPT12Q8IYM1 358 aa20.39■□□□□ 0.85
CNOT9-205ENST00000433439 CDCA7Q9BWT1 371 aaPredicted RBP20.39■□□□□ 0.85
CNOT9-205ENST00000433439 WNK3Q9BYP7 1800 aa20.39■□□□□ 0.85
CNOT9-205ENST00000433439 KDRP35968 1356 aa20.38■□□□□ 0.85
CNOT9-205ENST00000433439 NEFMP07197 916 aa20.38■□□□□ 0.85
CNOT9-205ENST00000433439 DDB1Q16531 1140 aa20.38■□□□□ 0.85
CNOT9-205ENST00000433439 DISP2A7MBM2 1401 aa20.37■□□□□ 0.85
CNOT9-205ENST00000433439 EXOC5O00471 708 aa20.37■□□□□ 0.85
CNOT9-205ENST00000433439 PARP4Q9UKK3 1724 aaKnown RBP20.36■□□□□ 0.85
CNOT9-205ENST00000433439 ZCRB1Q8TBF4 217 aaKnown RBP20.36■□□□□ 0.85
CNOT9-205ENST00000433439 PNNQ9H307 717 aaKnown RBP20.36■□□□□ 0.85
CNOT9-205ENST00000433439 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
CNOT9-205ENST00000433439 PLEKHO1Q53GL0 409 aaPredicted RBP20.35■□□□□ 0.85
CNOT9-205ENST00000433439 DDX54Q8TDD1 881 aaKnown RBP20.35■□□□□ 0.85
CNOT9-205ENST00000433439 SPG7Q9UQ90 795 aa20.35■□□□□ 0.85
CNOT9-205ENST00000433439 OVOS2A0A0G2JMS6 1433 aa20.35■□□□□ 0.85
CNOT9-205ENST00000433439 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
CNOT9-205ENST00000433439 ONECUT3O60422 494 aaPredicted RBP20.34■□□□□ 0.85
CNOT9-205ENST00000433439 PDE3BQ13370 1112 aa20.34■□□□□ 0.85
CNOT9-205ENST00000433439 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
CNOT9-205ENST00000433439 THSD7AQ9UPZ6 1657 aa20.34■□□□□ 0.85
CNOT9-205ENST00000433439 LRRC37A3O60309 1634 aa20.33■□□□□ 0.84
CNOT9-205ENST00000433439 RGS12O14924 1447 aa20.33■□□□□ 0.84
CNOT9-205ENST00000433439 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
CNOT9-205ENST00000433439 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
CNOT9-205ENST00000433439 ZNF530Q6P9A1 599 aaPredicted RBP20.32■□□□□ 0.84
CNOT9-205ENST00000433439 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
CNOT9-205ENST00000433439 TNS2Q63HR2 1409 aa20.31■□□□□ 0.84
CNOT9-205ENST00000433439 RUNDC1Q96C34 613 aa20.31■□□□□ 0.84
CNOT9-205ENST00000433439 FAM182BQ5T319 152 aa20.3■□□□□ 0.84
CNOT9-205ENST00000433439 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
CNOT9-205ENST00000433439 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
CNOT9-205ENST00000433439 NEUROD2Q15784 382 aa20.29■□□□□ 0.84
CNOT9-205ENST00000433439 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
CNOT9-205ENST00000433439 KRT27Q7Z3Y8 459 aa20.29■□□□□ 0.84
CNOT9-205ENST00000433439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.84
CNOT9-205ENST00000433439 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
CNOT9-205ENST00000433439 PKD1L3Q7Z443 1732 aa20.28■□□□□ 0.84
CNOT9-205ENST00000433439 BRWD3Q6RI45 1802 aa20.28■□□□□ 0.84
CNOT9-205ENST00000433439 GAS2L2Q8NHY3 880 aa20.28■□□□□ 0.84
CNOT9-205ENST00000433439 APAF1O14727 1248 aa20.27■□□□□ 0.84
CNOT9-205ENST00000433439 CYP27B1O15528 508 aa20.27■□□□□ 0.84
CNOT9-205ENST00000433439 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.84
CNOT9-205ENST00000433439 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
CNOT9-205ENST00000433439 PHKG2P15735 406 aa20.26■□□□□ 0.83
CNOT9-205ENST00000433439 SHANK3Q9BYB0 1731 aa20.26■□□□□ 0.83
CNOT9-205ENST00000433439 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
CNOT9-205ENST00000433439 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
CNOT9-205ENST00000433439 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
CNOT9-205ENST00000433439 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
CNOT9-205ENST00000433439 RIPK4P57078 832 aa20.23■□□□□ 0.83
CNOT9-205ENST00000433439 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
CNOT9-205ENST00000433439 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
CNOT9-205ENST00000433439 GNAT3A8MTJ3 354 aa20.22■□□□□ 0.83
CNOT9-205ENST00000433439 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
CNOT9-205ENST00000433439 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
CNOT9-205ENST00000433439 ACSBG1Q96GR2 724 aa20.21■□□□□ 0.83
CNOT9-205ENST00000433439 SRCAPQ6ZRS2 3230 aa20.21■□□□□ 0.83
CNOT9-205ENST00000433439 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
CNOT9-205ENST00000433439 DCTN1Q14203 1278 aa20.2■□□□□ 0.82
CNOT9-205ENST00000433439 KAT6BQ8WYB5 2073 aa20.2■□□□□ 0.82
CNOT9-205ENST00000433439 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
CNOT9-205ENST00000433439 LGR6Q9HBX8 967 aa20.19■□□□□ 0.82
CNOT9-205ENST00000433439 DLG5Q8TDM6 1919 aa20.19■□□□□ 0.82
CNOT9-205ENST00000433439 MCM10Q7L590 875 aa20.18■□□□□ 0.82
CNOT9-205ENST00000433439 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
CNOT9-205ENST00000433439 RNMTO43148 476 aaKnown RBP20.17■□□□□ 0.82
CNOT9-205ENST00000433439 FAM196AQ6ZSG2 479 aa20.17■□□□□ 0.82
CNOT9-205ENST00000433439 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
CNOT9-205ENST00000433439 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
CNOT9-205ENST00000433439 NKX1-1Q15270 411 aaPredicted RBP20.16■□□□□ 0.82
CNOT9-205ENST00000433439 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
CNOT9-205ENST00000433439 KDM6AO15550 1401 aaPredicted RBP20.16■□□□□ 0.82
CNOT9-205ENST00000433439 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
CNOT9-205ENST00000433439 CABP4P57796 275 aa20.15■□□□□ 0.82
CNOT9-205ENST00000433439 DOT1LQ8TEK3 1739 aa20.14■□□□□ 0.81
CNOT9-205ENST00000433439 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
CNOT9-205ENST00000433439 KCNQ2O43526 872 aa20.13■□□□□ 0.81
CNOT9-205ENST00000433439 HTATSF1O43719 755 aaKnown RBP20.13■□□□□ 0.81
CNOT9-205ENST00000433439 TRIM37O94972 964 aa20.13■□□□□ 0.81
CNOT9-205ENST00000433439 TEFQ10587 303 aa20.13■□□□□ 0.81
CNOT9-205ENST00000433439 TRIM35Q9UPQ4 493 aa20.13■□□□□ 0.81
CNOT9-205ENST00000433439 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
CNOT9-205ENST00000433439 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
CNOT9-205ENST00000433439 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
CNOT9-205ENST00000433439 SCN11AQ9UI33 1791 aa20.12■□□□□ 0.81
CNOT9-205ENST00000433439 TOGARAM1Q9Y4F4 1720 aa20.12■□□□□ 0.81
CNOT9-205ENST00000433439 PTF1AQ7RTS3 328 aa20.11■□□□□ 0.81
CNOT9-205ENST00000433439 NFATC2IPQ8NCF5 419 aa20.11■□□□□ 0.81
CNOT9-205ENST00000433439 ERVV-2B6SEH9 535 aa20.1■□□□□ 0.81
CNOT9-205ENST00000433439 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
CNOT9-205ENST00000433439 SLC52A2Q9HAB3 445 aa20.09■□□□□ 0.81
CNOT9-205ENST00000433439 SBF2Q86WG5 1849 aa20.09■□□□□ 0.81
CNOT9-205ENST00000433439 WWC1Q8IX03 1113 aa20.08■□□□□ 0.81
CNOT9-205ENST00000433439 ITGB4P16144 1822 aa20.08■□□□□ 0.8
CNOT9-205ENST00000433439 BCL9O00512 1426 aa20.08■□□□□ 0.8
CNOT9-205ENST00000433439 PIGBQ92521 554 aa20.07■□□□□ 0.8
CNOT9-205ENST00000433439 MIS18AQ9NYP9 233 aa20.07■□□□□ 0.8
CNOT9-205ENST00000433439 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 310.4 ms