RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 NAP1L2Q9ULW6 460 aaPredicted RBP4.58□□□□□ -1.68
SHPRH-205ENST00000433355 BCANQ96GW7 911 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 HOOK1Q9UJC3 728 aaKnown RBP4.58□□□□□ -1.68
SHPRH-205ENST00000433355 ATXN8OSP0DMR3 200 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 MST1RQ04912 1400 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 XRN1Q8IZH2 1706 aaKnown RBP4.58□□□□□ -1.68
SHPRH-205ENST00000433355 UBR1Q8IWV7 1749 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 ANKLE2Q86XL3 938 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 SNX21Q969T3 373 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 ZSCAN31Q96LW9 406 aaPredicted RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 A0A1W2PP64 1363 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 CEP170BQ9Y4F5 1589 aaPredicted RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 JMYQ8N9B5 988 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 ITPRIPQ8IWB1 547 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 SMC5Q8IY18 1101 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 TSHZ2Q9NRE2 1034 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 ALDH1L1O75891 902 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 INTS4Q96HW7 963 aaKnown RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 PYM1Q9BRP8 204 aaKnown RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 TERF1P54274 439 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 KIAA2012Q0VF49 1180 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 SLKQ9H2G2 1235 aaPredicted RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 SPEF2Q9C093 1822 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 MRE11P49959 708 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 HMGB1P09429 215 aaKnown RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 FAM193AP78312 1265 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 FAM69CQ0P6D2 419 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 MED1Q15648 1581 aaPredicted RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 CPLX2Q6PUV4 134 aaKnown RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 RBM27Q9P2N5 1060 aaKnown RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 U3KPZ7 1027 aaPredicted RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 NWD1Q149M9 1564 aa4.57□□□□□ -1.68
SHPRH-205ENST00000433355 NAT10Q9H0A0 1025 aaKnown RBP4.57□□□□□ -1.68
SHPRH-205ENST00000433355 HSP90AA2PQ14568 343 aaPredicted RBP4.56□□□□□ -1.68
SHPRH-205ENST00000433355 AK7Q96M32 723 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 CADPS2Q86UW7 1296 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 MTA3Q9BTC8 594 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 AEBP1Q8IUX7 1158 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 CC2D1BQ5T0F9 858 aaKnown RBP4.56□□□□□ -1.68
SHPRH-205ENST00000433355 RIMBP3CA6NJZ7 1639 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 RIMBP3BA6NNM3 1639 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 RIMBP3Q9UFD9 1639 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 PLEKHO1Q53GL0 409 aaPredicted RBP4.56□□□□□ -1.68
SHPRH-205ENST00000433355 CREBRFQ8IUR6 639 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 LMO7Q8WWI1 1683 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 CDKL5O76039 1030 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 TRMT2AQ8IZ69 625 aaKnown RBP4.56□□□□□ -1.68
SHPRH-205ENST00000433355 ERCC6L2Q5T890 1561 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.56□□□□□ -1.68
SHPRH-205ENST00000433355 TPM2P07951 284 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 USP6P35125 1406 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 TPM4P67936 248 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 PPP2R5BQ15173 497 aa4.56□□□□□ -1.68
SHPRH-205ENST00000433355 JCADQ9P266 1359 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 NEMFO60524 1076 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 TNNT2P45379 298 aaPredicted RBP4.55□□□□□ -1.68
SHPRH-205ENST00000433355 HYPKQ9NX55 129 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 MYO5BQ9ULV0 1848 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 DUSP27Q5VZP5 1158 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 KIF13AQ9H1H9 1805 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 U2SURPO15042 1029 aaKnown RBP4.55□□□□□ -1.68
SHPRH-205ENST00000433355 BMP15O95972 392 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 RARSP54136 660 aaKnown RBP4.55□□□□□ -1.68
SHPRH-205ENST00000433355 SEMA3FQ13275 785 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 GSE1Q14687 1217 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 HSP90AB3PQ58FF7 597 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.55□□□□□ -1.68
SHPRH-205ENST00000433355 DUOX1Q9NRD9 1551 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 ADAMTS8Q9UP79 889 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 TEFQ10587 303 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 CFAP70Q5T0N1 1121 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 IQCDQ96DY2 449 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 SCAND2PQ9GZW5 306 aaPredicted RBP4.55□□□□□ -1.68
SHPRH-205ENST00000433355 GOLGA6L3A6NEY3 463 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 NGDNQ8NEJ9 315 aaKnown RBP4.55□□□□□ -1.68
SHPRH-205ENST00000433355 CCDC171Q6TFL3 1326 aa4.55□□□□□ -1.68
SHPRH-205ENST00000433355 NPHP3Q7Z494 1330 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 TTC5Q8N0Z6 440 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 USP19O94966 1318 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 TUBBP07437 444 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 AMPHP49418 695 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 C1orf141Q5JVX7 400 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 UBE2Q2Q8WVN8 375 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 WDR33Q9C0J8 1336 aaKnown RBP4.54□□□□□ -1.68
SHPRH-205ENST00000433355 GOLGA6L4A6NEF3 574 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 MTHFSP49914 203 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 PARP4Q9UKK3 1724 aaKnown RBP4.54□□□□□ -1.68
SHPRH-205ENST00000433355 SHPRHQ149N8 1683 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 FOXD1Q16676 465 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 ZSCAN25Q6NSZ9 544 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 CTNNA3Q9UI47 895 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 TMEM94Q12767 1356 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 RIPK4P57078 832 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 KDM2BQ8NHM5 1336 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 FMNL3Q8IVF7 1028 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 ERBB3P21860 1342 aa4.54□□□□□ -1.68
SHPRH-205ENST00000433355 RCAN1P53805 252 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 DIAPH3Q9NSV4 1193 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 ABCC4O15439 1325 aa4.53□□□□□ -1.68
SHPRH-205ENST00000433355 GNAI2P04899 355 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms