RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 KCNH5Q8NCM2 988 aa25.78■■□□□ 1.72
SDHAF3-202ENST00000432641 LRRC37A3O60309 1634 aa25.77■■□□□ 1.72
SDHAF3-202ENST00000432641 ELL2O00472 640 aaPredicted RBP25.77■■□□□ 1.72
SDHAF3-202ENST00000432641 NFAT5O94916 1531 aa25.77■■□□□ 1.72
SDHAF3-202ENST00000432641 ZBTB7BO15156 539 aaPredicted RBP25.76■■□□□ 1.71
SDHAF3-202ENST00000432641 PSME1Q06323 249 aa25.76■■□□□ 1.71
SDHAF3-202ENST00000432641 ESCO1Q5FWF5 840 aa25.75■■□□□ 1.71
SDHAF3-202ENST00000432641 PTPRCP08575 1304 aa25.74■■□□□ 1.71
SDHAF3-202ENST00000432641 KIF1AQ12756 1690 aa25.73■■□□□ 1.71
SDHAF3-202ENST00000432641 BABAM1Q9NWV8 329 aa25.73■■□□□ 1.71
SDHAF3-202ENST00000432641 C14orf37Q86TY3 774 aa25.73■■□□□ 1.71
SDHAF3-202ENST00000432641 IP6K1Q92551 441 aa25.73■■□□□ 1.71
SDHAF3-202ENST00000432641 SOS1Q07889 1333 aaPredicted RBP25.73■■□□□ 1.71
SDHAF3-202ENST00000432641 NUTM2GQ5VZR2 741 aa25.72■■□□□ 1.71
SDHAF3-202ENST00000432641 GCC1Q96CN9 775 aa25.72■■□□□ 1.71
SDHAF3-202ENST00000432641 GNAT3A8MTJ3 354 aa25.7■■□□□ 1.71
SDHAF3-202ENST00000432641 INTS3Q68E01 1043 aaKnown RBP25.7■■□□□ 1.7
SDHAF3-202ENST00000432641 UPF2Q9HAU5 1272 aaKnown RBP25.69■■□□□ 1.7
SDHAF3-202ENST00000432641 TSPYL4Q9UJ04 414 aa25.69■■□□□ 1.7
SDHAF3-202ENST00000432641 MAP3K5Q99683 1374 aa25.69■■□□□ 1.7
SDHAF3-202ENST00000432641 NUCB1Q02818 461 aa25.68■■□□□ 1.7
SDHAF3-202ENST00000432641 DNAJC5Q9H3Z4 198 aa25.68■■□□□ 1.7
SDHAF3-202ENST00000432641 SLIT3O75094 1523 aa25.68■■□□□ 1.7
SDHAF3-202ENST00000432641 DAXXQ9UER7 740 aaPredicted RBP25.67■■□□□ 1.7
SDHAF3-202ENST00000432641 FOXO3O43524 673 aa25.67■■□□□ 1.7
SDHAF3-202ENST00000432641 MST1RQ04912 1400 aa25.65■■□□□ 1.7
SDHAF3-202ENST00000432641 NCOA3Q9Y6Q9 1424 aa25.65■■□□□ 1.7
SDHAF3-202ENST00000432641 TRPM3Q9HCF6 1732 aaPredicted RBP25.64■■□□□ 1.7
SDHAF3-202ENST00000432641 RGS12O14924 1447 aa25.64■■□□□ 1.7
SDHAF3-202ENST00000432641 PROSER2Q86WR7 435 aaPredicted RBP25.64■■□□□ 1.7
SDHAF3-202ENST00000432641 RBM33Q96EV2 1170 aaKnown RBP25.64■■□□□ 1.7
SDHAF3-202ENST00000432641 C19orf44Q9H6X5 657 aa25.63■■□□□ 1.69
SDHAF3-202ENST00000432641 CACNA1FO60840 1977 aa25.63■■□□□ 1.69
SDHAF3-202ENST00000432641 CHD1LQ86WJ1 897 aa25.62■■□□□ 1.69
SDHAF3-202ENST00000432641 DCCP43146 1447 aa25.61■■□□□ 1.69
SDHAF3-202ENST00000432641 USP19O94966 1318 aa25.61■■□□□ 1.69
SDHAF3-202ENST00000432641 MSH6P52701 1360 aa25.61■■□□□ 1.69
SDHAF3-202ENST00000432641 KRT24Q2M2I5 525 aa25.61■■□□□ 1.69
SDHAF3-202ENST00000432641 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
SDHAF3-202ENST00000432641 LTV1Q96GA3 475 aaPredicted RBP25.6■■□□□ 1.69
SDHAF3-202ENST00000432641 ORAI2Q96SN7 254 aa25.59■■□□□ 1.69
SDHAF3-202ENST00000432641 NCAPD2Q15021 1401 aa25.58■■□□□ 1.69
SDHAF3-202ENST00000432641 SLC4A2P04920 1241 aa25.58■■□□□ 1.69
SDHAF3-202ENST00000432641 TAF7Q15545 349 aaPredicted RBP25.58■■□□□ 1.69
SDHAF3-202ENST00000432641 STK31Q9BXU1 1019 aa25.58■■□□□ 1.69
SDHAF3-202ENST00000432641 CHMP4AQ9BY43 222 aa25.57■■□□□ 1.68
SDHAF3-202ENST00000432641 GCP02774 474 aa25.57■■□□□ 1.68
SDHAF3-202ENST00000432641 ARHGEF25Q86VW2 580 aa25.57■■□□□ 1.68
SDHAF3-202ENST00000432641 FAM208AQ9UK61 1670 aaKnown RBP25.57■■□□□ 1.68
SDHAF3-202ENST00000432641 CCDC30Q5VVM6 783 aa25.56■■□□□ 1.68
SDHAF3-202ENST00000432641 RPAP2Q8IXW5 612 aaPredicted RBP25.56■■□□□ 1.68
SDHAF3-202ENST00000432641 CEMIPQ8WUJ3 1361 aa25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 LMO7Q8WWI1 1683 aa25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 SEC24BO95487 1268 aa25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 CCT4P50991 539 aaKnown RBP25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 IL17REQ8NFR9 667 aa25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 MIS18AQ9NYP9 233 aa25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 MED1Q15648 1581 aaPredicted RBP25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 CAMTA1Q9Y6Y1 1673 aa25.55■■□□□ 1.68
SDHAF3-202ENST00000432641 TBC1D32Q96NH3 1257 aa25.54■■□□□ 1.68
SDHAF3-202ENST00000432641 KRT28Q7Z3Y7 464 aa25.54■■□□□ 1.68
SDHAF3-202ENST00000432641 SIRT2Q8IXJ6 389 aa25.54■■□□□ 1.68
SDHAF3-202ENST00000432641 C1orf115Q9H7X2 142 aa25.54■■□□□ 1.68
SDHAF3-202ENST00000432641 BECN1Q14457 450 aa25.53■■□□□ 1.68
SDHAF3-202ENST00000432641 AMOTQ4VCS5 1084 aa25.53■■□□□ 1.68
SDHAF3-202ENST00000432641 NBPF6Q5VWK0 638 aa25.53■■□□□ 1.68
SDHAF3-202ENST00000432641 NBPF4Q96M43 638 aa25.53■■□□□ 1.68
SDHAF3-202ENST00000432641 LNPKQ9C0E8 428 aa25.53■■□□□ 1.68
SDHAF3-202ENST00000432641 ALS2Q96Q42 1657 aa25.53■■□□□ 1.68
SDHAF3-202ENST00000432641 NBR1Q14596 966 aa25.52■■□□□ 1.68
SDHAF3-202ENST00000432641 ANKRD44Q8N8A2 993 aa25.52■■□□□ 1.68
SDHAF3-202ENST00000432641 OVOS2A0A0G2JMS6 1433 aa25.52■■□□□ 1.68
SDHAF3-202ENST00000432641 ANKRD45Q5TZF3 282 aa25.52■■□□□ 1.68
SDHAF3-202ENST00000432641 USP35Q9P2H5 1018 aa25.52■■□□□ 1.68
SDHAF3-202ENST00000432641 BMP2KLQ5H9B9 411 aa25.51■■□□□ 1.67
SDHAF3-202ENST00000432641 ATP10DQ9P241 1426 aa25.51■■□□□ 1.67
SDHAF3-202ENST00000432641 ATF3P18847 181 aa25.51■■□□□ 1.67
SDHAF3-202ENST00000432641 PLEKHO1Q53GL0 409 aaPredicted RBP25.51■■□□□ 1.67
SDHAF3-202ENST00000432641 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
SDHAF3-202ENST00000432641 RTL5Q5HYW3 569 aaPredicted RBP25.5■■□□□ 1.67
SDHAF3-202ENST00000432641 DCTPP1Q9H773 170 aa25.5■■□□□ 1.67
SDHAF3-202ENST00000432641 N4BP2Q86UW6 1770 aaPredicted RBP25.5■■□□□ 1.67
SDHAF3-202ENST00000432641 AKAP4Q5JQC9 854 aa25.49■■□□□ 1.67
SDHAF3-202ENST00000432641 USHBP1Q8N6Y0 703 aa25.49■■□□□ 1.67
SDHAF3-202ENST00000432641 RGPD2P0DJD1 1756 aa25.49■■□□□ 1.67
SDHAF3-202ENST00000432641 EIF5BO60841 1220 aaKnown RBP25.49■■□□□ 1.67
SDHAF3-202ENST00000432641 HOXB7P09629 217 aa25.49■■□□□ 1.67
SDHAF3-202ENST00000432641 PXDNLA1KZ92 1463 aa25.48■■□□□ 1.67
SDHAF3-202ENST00000432641 KDM3BQ7LBC6 1761 aa25.48■■□□□ 1.67
SDHAF3-202ENST00000432641 TMEM94Q12767 1356 aa25.47■■□□□ 1.67
SDHAF3-202ENST00000432641 HMMRO75330 724 aa25.46■■□□□ 1.67
SDHAF3-202ENST00000432641 CEP85Q6P2H3 762 aa25.46■■□□□ 1.67
SDHAF3-202ENST00000432641 STRCP1A6NGW2 1772 aa25.45■■□□□ 1.66
SDHAF3-202ENST00000432641 ABCC6O95255 1503 aa25.44■■□□□ 1.66
SDHAF3-202ENST00000432641 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
SDHAF3-202ENST00000432641 FLIIQ13045 1269 aa25.44■■□□□ 1.66
SDHAF3-202ENST00000432641 ANKRD24Q8TF21 1146 aa25.44■■□□□ 1.66
SDHAF3-202ENST00000432641 XPCQ01831 940 aaPredicted RBP25.44■■□□□ 1.66
SDHAF3-202ENST00000432641 LMOD2Q6P5Q4 547 aa25.44■■□□□ 1.66
SDHAF3-202ENST00000432641 CADPS2Q86UW7 1296 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms