RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 DESP17661 470 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 MPHOSPH6Q99547 160 aaKnown RBP11.84□□□□□ -0.51
FN1-209ENST00000432072 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 SETDB2Q96T68 719 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 CA8P35219 290 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 NBPF1Q3BBV0 1214 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 DDX49Q9Y6V7 483 aaKnown RBP11.83□□□□□ -0.52
FN1-209ENST00000432072 HSPA2P54652 639 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 NBPF6Q5VWK0 638 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 NBPF5PQ86XG9 351 aaPredicted RBP11.83□□□□□ -0.52
FN1-209ENST00000432072 NBPF4Q96M43 638 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 CCDC173Q0VFZ6 552 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 LARP1Q6PKG0 1096 aaKnown RBP11.83□□□□□ -0.52
FN1-209ENST00000432072 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
FN1-209ENST00000432072 SLC5A1P13866 664 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 RAPGEF6Q8TEU7 1601 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 AACSQ86V21 672 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
FN1-209ENST00000432072 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 CHRNA2Q15822 529 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 DDB1Q16531 1140 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 BICRAQ9NZM4 1560 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 AIDAQ96BJ3 306 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 GPTP24298 496 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 CCDC7Q96M83 1385 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 PIBF1Q8WXW3 757 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 NOB1Q9ULX3 412 aaKnown RBP11.82□□□□□ -0.52
FN1-209ENST00000432072 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 GOLGA6L3A6NEY3 463 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 ZNF444Q8N0Y2 327 aaPredicted RBP11.82□□□□□ -0.52
FN1-209ENST00000432072 WWC3Q9ULE0 1092 aa11.82□□□□□ -0.52
FN1-209ENST00000432072 PCF11O94913 1555 aaKnown RBP11.81□□□□□ -0.52
FN1-209ENST00000432072 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 HDAC9Q9UKV0 1011 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 ZBED9Q6R2W3 1325 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 MINDY4BA8MYZ0 360 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 MYD88Q99836 296 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 CCDC96Q2M329 555 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
FN1-209ENST00000432072 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 NEBLO76041 1014 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
FN1-209ENST00000432072 FMNL2Q96PY5 1086 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
FN1-209ENST00000432072 LRRC59Q96AG4 307 aaKnown RBP11.81□□□□□ -0.52
FN1-209ENST00000432072 WASLO00401 505 aaPredicted RBP11.8□□□□□ -0.52
FN1-209ENST00000432072 CUL5Q93034 780 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 SDF4Q9BRK5 362 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
FN1-209ENST00000432072 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 ADAMTS8Q9UP79 889 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 SMARCC1Q92922 1105 aaPredicted RBP11.8□□□□□ -0.52
FN1-209ENST00000432072 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 PPP2R1AP30153 589 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
FN1-209ENST00000432072 WDR70Q9NW82 654 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 NSD3Q9BZ95 1437 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 MAP4K4O95819 1239 aaPredicted RBP11.8□□□□□ -0.52
FN1-209ENST00000432072 IDI1Q13907 227 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 BMP2KQ9NSY1 1161 aaPredicted RBP11.8□□□□□ -0.52
FN1-209ENST00000432072 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 KIF7Q2M1P5 1343 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 MIS18AQ9NYP9 233 aa11.8□□□□□ -0.52
FN1-209ENST00000432072 BIN2Q9UBW5 565 aaPredicted RBP11.8□□□□□ -0.52
FN1-209ENST00000432072 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
FN1-209ENST00000432072 EHMT1Q9H9B1 1298 aa11.79□□□□□ -0.52
FN1-209ENST00000432072 NAIPQ13075 1403 aa11.79□□□□□ -0.52
FN1-209ENST00000432072 STIM1Q13586 685 aa11.79□□□□□ -0.52
FN1-209ENST00000432072 SSBP05455 408 aaKnown RBP eCLIP11.79□□□□□ -0.52
FN1-209ENST00000432072 IFNL2Q8IZJ0 200 aa11.79□□□□□ -0.52
FN1-209ENST00000432072 JDP2Q8WYK2 163 aa11.79□□□□□ -0.52
FN1-209ENST00000432072 NOL7Q9UMY1 257 aaKnown RBP11.78□□□□□ -0.52
FN1-209ENST00000432072 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
FN1-209ENST00000432072 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
FN1-209ENST00000432072 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
FN1-209ENST00000432072 AAMPQ13685 434 aa11.78□□□□□ -0.52
FN1-209ENST00000432072 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
FN1-209ENST00000432072 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
FN1-209ENST00000432072 STK32BQ9NY57 414 aa11.78□□□□□ -0.52
FN1-209ENST00000432072 CDC45O75419 566 aa11.78□□□□□ -0.52
FN1-209ENST00000432072 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
FN1-209ENST00000432072 CDKL5O76039 1030 aa11.77□□□□□ -0.52
FN1-209ENST00000432072 MAP3K12Q12852 859 aa11.77□□□□□ -0.52
FN1-209ENST00000432072 EXOC6Q8TAG9 804 aa11.77□□□□□ -0.52
FN1-209ENST00000432072 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.52
FN1-209ENST00000432072 CABP5Q9NP86 173 aa11.77□□□□□ -0.52
FN1-209ENST00000432072 WDR7Q9Y4E6 1490 aa11.77□□□□□ -0.52
FN1-209ENST00000432072 PDCP20941 246 aa11.77□□□□□ -0.52
FN1-209ENST00000432072 ANKRD1Q15327 319 aa11.77□□□□□ -0.52
FN1-209ENST00000432072 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.52
FN1-209ENST00000432072 FCHSD2O94868 740 aa11.77□□□□□ -0.53
FN1-209ENST00000432072 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms