RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 CGNL1Q0VF96 1302 aa24.33■■□□□ 1.48
RCC1-209ENST00000430407 PRIM1P49642 420 aaKnown RBP24.32■■□□□ 1.48
RCC1-209ENST00000430407 ZNF827Q17R98 1081 aa24.32■■□□□ 1.48
RCC1-209ENST00000430407 RTL1A6NKG5 1358 aa24.31■■□□□ 1.48
RCC1-209ENST00000430407 FAM208AQ9UK61 1670 aaKnown RBP24.31■■□□□ 1.48
RCC1-209ENST00000430407 RRS1Q15050 365 aaKnown RBP24.31■■□□□ 1.48
RCC1-209ENST00000430407 SMG6Q86US8 1419 aaKnown RBP24.31■■□□□ 1.48
RCC1-209ENST00000430407 SGIP1Q9BQI5 828 aa24.31■■□□□ 1.48
RCC1-209ENST00000430407 BTAF1O14981 1849 aa24.31■■□□□ 1.48
RCC1-209ENST00000430407 SLC16A10Q8TF71 515 aa24.3■■□□□ 1.48
RCC1-209ENST00000430407 TFCP2L1Q9NZI6 479 aa24.3■■□□□ 1.48
RCC1-209ENST00000430407 RAPGEF4Q8WZA2 1011 aa24.29■■□□□ 1.48
RCC1-209ENST00000430407 AKT1S1Q96B36 256 aa24.29■■□□□ 1.48
RCC1-209ENST00000430407 KIF20BQ96Q89 1820 aa24.28■■□□□ 1.48
RCC1-209ENST00000430407 POLD1P28340 1107 aa24.28■■□□□ 1.48
RCC1-209ENST00000430407 PANK3Q9H999 370 aa24.28■■□□□ 1.48
RCC1-209ENST00000430407 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
RCC1-209ENST00000430407 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
RCC1-209ENST00000430407 KAT6BQ8WYB5 2073 aa24.26■■□□□ 1.47
RCC1-209ENST00000430407 TATP17735 454 aaPredicted RBP24.26■■□□□ 1.47
RCC1-209ENST00000430407 NBPF6Q5VWK0 638 aa24.26■■□□□ 1.47
RCC1-209ENST00000430407 NBPF4Q96M43 638 aa24.26■■□□□ 1.47
RCC1-209ENST00000430407 KLHL34Q8N239 644 aa24.25■■□□□ 1.47
RCC1-209ENST00000430407 USHBP1Q8N6Y0 703 aa24.24■■□□□ 1.47
RCC1-209ENST00000430407 CCNL1Q9UK58 526 aaPredicted RBP24.24■■□□□ 1.47
RCC1-209ENST00000430407 KCNQ4P56696 695 aa24.23■■□□□ 1.47
RCC1-209ENST00000430407 FLT4P35916 1363 aa24.23■■□□□ 1.47
RCC1-209ENST00000430407 MEGF6O75095 1541 aa24.23■■□□□ 1.47
RCC1-209ENST00000430407 PNPLA7Q6ZV29 1317 aa24.22■■□□□ 1.47
RCC1-209ENST00000430407 INSRP06213 1382 aa24.21■■□□□ 1.47
RCC1-209ENST00000430407 MAP3K5Q99683 1374 aa24.21■■□□□ 1.47
RCC1-209ENST00000430407 KIF7Q2M1P5 1343 aa24.21■■□□□ 1.47
RCC1-209ENST00000430407 MSH5O43196 834 aa24.21■■□□□ 1.47
RCC1-209ENST00000430407 HMGB2P26583 209 aaKnown RBP24.21■■□□□ 1.47
RCC1-209ENST00000430407 GPR162Q16538 588 aa24.21■■□□□ 1.47
RCC1-209ENST00000430407 HSP90AB2PQ58FF8 381 aa24.2■■□□□ 1.46
RCC1-209ENST00000430407 PCDH11XQ9BZA7 1347 aa24.19■■□□□ 1.46
RCC1-209ENST00000430407 PCDH11YQ9BZA8 1340 aa24.19■■□□□ 1.46
RCC1-209ENST00000430407 EMILIN1Q9Y6C2 1016 aa24.19■■□□□ 1.46
RCC1-209ENST00000430407 NSD2O96028 1365 aa24.18■■□□□ 1.46
RCC1-209ENST00000430407 ZNF784Q8NCA9 323 aaPredicted RBP24.17■■□□□ 1.46
RCC1-209ENST00000430407 KNSTRNQ9Y448 316 aa24.17■■□□□ 1.46
RCC1-209ENST00000430407 DOT1LQ8TEK3 1739 aa24.16■■□□□ 1.46
RCC1-209ENST00000430407 PPM1GO15355 546 aaPredicted RBP24.16■■□□□ 1.46
RCC1-209ENST00000430407 PELP1Q8IZL8 1130 aaKnown RBP24.16■■□□□ 1.46
RCC1-209ENST00000430407 POLKQ9UBT6 870 aa24.14■■□□□ 1.45
RCC1-209ENST00000430407 WASHC2AQ641Q2 1341 aa24.13■■□□□ 1.45
RCC1-209ENST00000430407 MPRIPQ6WCQ1 1025 aa24.13■■□□□ 1.45
RCC1-209ENST00000430407 RGPD2P0DJD1 1756 aa24.13■■□□□ 1.45
RCC1-209ENST00000430407 TNNT2P45379 298 aaPredicted RBP24.12■■□□□ 1.45
RCC1-209ENST00000430407 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
RCC1-209ENST00000430407 MORC1Q86VD1 984 aa24.1■■□□□ 1.45
RCC1-209ENST00000430407 FLAD1Q8NFF5 587 aa24.1■■□□□ 1.45
RCC1-209ENST00000430407 QSER1Q2KHR3 1735 aa24.1■■□□□ 1.45
RCC1-209ENST00000430407 PALLDQ8WX93 1383 aa24.09■■□□□ 1.45
RCC1-209ENST00000430407 COL23A1Q86Y22 540 aaPredicted RBP24.09■■□□□ 1.45
RCC1-209ENST00000430407 SMARCC1Q92922 1105 aaPredicted RBP24.09■■□□□ 1.45
RCC1-209ENST00000430407 SPG7Q9UQ90 795 aa24.09■■□□□ 1.45
RCC1-209ENST00000430407 SHANK3Q9BYB0 1731 aa24.09■■□□□ 1.45
RCC1-209ENST00000430407 LY75O60449 1722 aa24.08■■□□□ 1.45
RCC1-209ENST00000430407 CYP27B1O15528 508 aa24.08■■□□□ 1.45
RCC1-209ENST00000430407 AMER1Q5JTC6 1135 aaPredicted RBP24.06■■□□□ 1.44
RCC1-209ENST00000430407 MSL1Q68DK7 614 aa24.05■■□□□ 1.44
RCC1-209ENST00000430407 NLGN2Q8NFZ4 835 aa24.05■■□□□ 1.44
RCC1-209ENST00000430407 MAP2P11137 1827 aaKnown RBP24.05■■□□□ 1.44
RCC1-209ENST00000430407 PER1O15534 1290 aaPredicted RBP24.04■■□□□ 1.44
RCC1-209ENST00000430407 AK7Q96M32 723 aa24.04■■□□□ 1.44
RCC1-209ENST00000430407 GRIN3BO60391 1043 aa24.03■■□□□ 1.44
RCC1-209ENST00000430407 EIF4A2Q14240 407 aaKnown RBP24.02■■□□□ 1.44
RCC1-209ENST00000430407 EYA1Q99502 592 aa24.02■■□□□ 1.44
RCC1-209ENST00000430407 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
RCC1-209ENST00000430407 NKX1-1Q15270 411 aaPredicted RBP24■■□□□ 1.43
RCC1-209ENST00000430407 PIGBQ92521 554 aa24■■□□□ 1.43
RCC1-209ENST00000430407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24■■□□□ 1.43
RCC1-209ENST00000430407 TUBGCP6Q96RT7 1819 aa24■■□□□ 1.43
RCC1-209ENST00000430407 TMOD3Q9NYL9 352 aa23.99■■□□□ 1.43
RCC1-209ENST00000430407 CHD4Q14839 1912 aa23.99■■□□□ 1.43
RCC1-209ENST00000430407 IFNL2Q8IZJ0 200 aa23.98■■□□□ 1.43
RCC1-209ENST00000430407 COL24A1Q17RW2 1714 aa23.98■■□□□ 1.43
RCC1-209ENST00000430407 PHF14O94880 888 aa23.97■■□□□ 1.43
RCC1-209ENST00000430407 CD2APQ9Y5K6 639 aa23.97■■□□□ 1.43
RCC1-209ENST00000430407 C5P01031 1676 aa23.96■■□□□ 1.43
RCC1-209ENST00000430407 NPC1L1Q9UHC9 1359 aa23.96■■□□□ 1.43
RCC1-209ENST00000430407 C1QTNF8P60827 252 aa23.96■■□□□ 1.43
RCC1-209ENST00000430407 CC2D1BQ5T0F9 858 aaKnown RBP23.95■■□□□ 1.42
RCC1-209ENST00000430407 IGSF1Q8N6C5 1336 aa23.94■■□□□ 1.42
RCC1-209ENST00000430407 SENP3-EIF4A1A0A087X0R7 540 aa23.94■■□□□ 1.42
RCC1-209ENST00000430407 LOC102724428A0A0B4J2F2 783 aa23.94■■□□□ 1.42
RCC1-209ENST00000430407 GIGYF1O75420 1035 aaPredicted RBP23.94■■□□□ 1.42
RCC1-209ENST00000430407 YBX3P16989 372 aaKnown RBP eCLIP23.94■■□□□ 1.428e-7■□□□□ 9
RCC1-209ENST00000430407 SIK1P57059 783 aa23.94■■□□□ 1.42
RCC1-209ENST00000430407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.93■■□□□ 1.42
RCC1-209ENST00000430407 PHKG2P15735 406 aa23.93■■□□□ 1.42
RCC1-209ENST00000430407 SSFA2P28290 1259 aa23.93■■□□□ 1.42
RCC1-209ENST00000430407 PKD1L3Q7Z443 1732 aa23.93■■□□□ 1.42
RCC1-209ENST00000430407 ATP6V1AP38606 617 aa23.92■■□□□ 1.42
RCC1-209ENST00000430407 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
RCC1-209ENST00000430407 MTHFSP49914 203 aa23.9■■□□□ 1.42
RCC1-209ENST00000430407 ASAP1Q9ULH1 1129 aa23.9■■□□□ 1.42
RCC1-209ENST00000430407 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms