RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ZCRB1Q8TBF4 217 aaKnown RBP23.8■■□□□ 1.4
CPSF4-203ENST00000430038 INSRP06213 1382 aa23.79■■□□□ 1.4
CPSF4-203ENST00000430038 PRIM1P49642 420 aaKnown RBP23.79■■□□□ 1.4
CPSF4-203ENST00000430038 NSD2O96028 1365 aa23.78■■□□□ 1.4
CPSF4-203ENST00000430038 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
CPSF4-203ENST00000430038 PTGER2P43116 358 aa23.78■■□□□ 1.4
CPSF4-203ENST00000430038 KCNQ4P56696 695 aa23.78■■□□□ 1.4
CPSF4-203ENST00000430038 ZNF827Q17R98 1081 aa23.78■■□□□ 1.4
CPSF4-203ENST00000430038 STK32BQ9NY57 414 aa23.78■■□□□ 1.4
CPSF4-203ENST00000430038 ATF5Q9Y2D1 282 aaPredicted RBP23.77■■□□□ 1.4
CPSF4-203ENST00000430038 FLT4P35916 1363 aa23.76■■□□□ 1.39
CPSF4-203ENST00000430038 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
CPSF4-203ENST00000430038 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
CPSF4-203ENST00000430038 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
CPSF4-203ENST00000430038 LY75O60449 1722 aa23.74■■□□□ 1.39
CPSF4-203ENST00000430038 SYTL4Q96C24 671 aaPredicted RBP23.73■■□□□ 1.39
CPSF4-203ENST00000430038 TUBGCP6Q96RT7 1819 aa23.73■■□□□ 1.39
CPSF4-203ENST00000430038 AKT1S1Q96B36 256 aa23.72■■□□□ 1.39
CPSF4-203ENST00000430038 SGIP1Q9BQI5 828 aa23.72■■□□□ 1.39
CPSF4-203ENST00000430038 PPP1R1BQ9UD71 204 aaPredicted RBP23.72■■□□□ 1.39
CPSF4-203ENST00000430038 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
CPSF4-203ENST00000430038 EIF4G2P78344 907 aaKnown RBP eCLIP23.71■■□□□ 1.39
CPSF4-203ENST00000430038 POLKQ9UBT6 870 aa23.71■■□□□ 1.39
CPSF4-203ENST00000430038 PPM1GO15355 546 aaPredicted RBP23.7■■□□□ 1.38
CPSF4-203ENST00000430038 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
CPSF4-203ENST00000430038 CYP27B1O15528 508 aa23.69■■□□□ 1.38
CPSF4-203ENST00000430038 TATP17735 454 aaPredicted RBP23.69■■□□□ 1.38
CPSF4-203ENST00000430038 RAPGEF4Q8WZA2 1011 aa23.69■■□□□ 1.38
CPSF4-203ENST00000430038 NCAPD2Q15021 1401 aa23.68■■□□□ 1.38
CPSF4-203ENST00000430038 TOGARAM1Q9Y4F4 1720 aa23.68■■□□□ 1.38
CPSF4-203ENST00000430038 CGNL1Q0VF96 1302 aa23.68■■□□□ 1.38
CPSF4-203ENST00000430038 ITGB4P16144 1822 aa23.68■■□□□ 1.38
CPSF4-203ENST00000430038 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
CPSF4-203ENST00000430038 PANK3Q9H999 370 aa23.67■■□□□ 1.38
CPSF4-203ENST00000430038 PKD1L3Q7Z443 1732 aa23.67■■□□□ 1.38
CPSF4-203ENST00000430038 TNNT2P45379 298 aaPredicted RBP23.66■■□□□ 1.38
CPSF4-203ENST00000430038 SLC27A3Q5K4L6 730 aa23.66■■□□□ 1.38
CPSF4-203ENST00000430038 EYA1Q99502 592 aa23.66■■□□□ 1.38
CPSF4-203ENST00000430038 MTFR1LQ9H019 292 aa23.66■■□□□ 1.38
CPSF4-203ENST00000430038 QSER1Q2KHR3 1735 aa23.66■■□□□ 1.38
CPSF4-203ENST00000430038 UTRNP46939 3433 aa23.65■■□□□ 1.38
CPSF4-203ENST00000430038 PNPLA7Q6ZV29 1317 aa23.64■■□□□ 1.38
CPSF4-203ENST00000430038 COL24A1Q17RW2 1714 aa23.62■■□□□ 1.37
CPSF4-203ENST00000430038 PCDH11XQ9BZA7 1347 aa23.61■■□□□ 1.37
CPSF4-203ENST00000430038 PCDH11YQ9BZA8 1340 aa23.61■■□□□ 1.37
CPSF4-203ENST00000430038 FHDC1Q9C0D6 1143 aaPredicted RBP23.61■■□□□ 1.37
CPSF4-203ENST00000430038 EIF4A2Q14240 407 aaKnown RBP23.6■■□□□ 1.37
CPSF4-203ENST00000430038 SYT17Q9BSW7 474 aa23.6■■□□□ 1.37
CPSF4-203ENST00000430038 TAF1LQ8IZX4 1826 aa23.6■■□□□ 1.37
CPSF4-203ENST00000430038 CCNL1Q9UK58 526 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-203ENST00000430038 MPRIPQ6WCQ1 1025 aa23.58■■□□□ 1.37
CPSF4-203ENST00000430038 NKX1-1Q15270 411 aaPredicted RBP23.56■■□□□ 1.36
CPSF4-203ENST00000430038 TFCP2L1Q9NZI6 479 aa23.56■■□□□ 1.36
CPSF4-203ENST00000430038 C5P01031 1676 aa23.56■■□□□ 1.36
CPSF4-203ENST00000430038 PIGBQ92521 554 aa23.55■■□□□ 1.36
CPSF4-203ENST00000430038 ARXQ96QS3 562 aa23.55■■□□□ 1.36
CPSF4-203ENST00000430038 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
CPSF4-203ENST00000430038 COL23A1Q86Y22 540 aaPredicted RBP23.53■■□□□ 1.36
CPSF4-203ENST00000430038 PALLDQ8WX93 1383 aa23.52■■□□□ 1.36
CPSF4-203ENST00000430038 SMIM5Q71RC9 77 aa23.52■■□□□ 1.36
CPSF4-203ENST00000430038 SLC16A10Q8TF71 515 aa23.51■■□□□ 1.35
CPSF4-203ENST00000430038 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
CPSF4-203ENST00000430038 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
CPSF4-203ENST00000430038 PHKG2P15735 406 aa23.5■■□□□ 1.35
CPSF4-203ENST00000430038 YY1P25490 414 aa23.5■■□□□ 1.35
CPSF4-203ENST00000430038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.5■■□□□ 1.35
CPSF4-203ENST00000430038 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
CPSF4-203ENST00000430038 MORC1Q86VD1 984 aa23.48■■□□□ 1.35
CPSF4-203ENST00000430038 GOLGB1Q14789 3259 aaKnown RBP23.47■■□□□ 1.35
CPSF4-203ENST00000430038 AMER1Q5JTC6 1135 aaPredicted RBP23.47■■□□□ 1.35
CPSF4-203ENST00000430038 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
CPSF4-203ENST00000430038 ASAP1Q9ULH1 1129 aa23.47■■□□□ 1.35
CPSF4-203ENST00000430038 C4BP0C0L5 1744 aa23.47■■□□□ 1.35
CPSF4-203ENST00000430038 UBR3Q6ZT12 1888 aa23.46■■□□□ 1.35
CPSF4-203ENST00000430038 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
CPSF4-203ENST00000430038 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
CPSF4-203ENST00000430038 PER1O15534 1290 aaPredicted RBP23.44■■□□□ 1.34
CPSF4-203ENST00000430038 MSL1Q68DK7 614 aa23.44■■□□□ 1.34
CPSF4-203ENST00000430038 KNSTRNQ9Y448 316 aa23.44■■□□□ 1.34
CPSF4-203ENST00000430038 MSH5O43196 834 aa23.43■■□□□ 1.34
CPSF4-203ENST00000430038 ITPK1Q13572 414 aa23.43■■□□□ 1.34
CPSF4-203ENST00000430038 NLGN2Q8NFZ4 835 aa23.43■■□□□ 1.34
CPSF4-203ENST00000430038 LINC00116Q8NCU8 138 aa23.42■■□□□ 1.34
CPSF4-203ENST00000430038 SMARCC1Q92922 1105 aaPredicted RBP23.42■■□□□ 1.34
CPSF4-203ENST00000430038 ATG3Q9NT62 314 aa23.42■■□□□ 1.34
CPSF4-203ENST00000430038 CHD4Q14839 1912 aa23.41■■□□□ 1.34
CPSF4-203ENST00000430038 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
CPSF4-203ENST00000430038 DCAF8L1A6NGE4 600 aa23.41■■□□□ 1.34
CPSF4-203ENST00000430038 IL13P35225 146 aa23.41■■□□□ 1.34
CPSF4-203ENST00000430038 SIK1P57059 783 aa23.41■■□□□ 1.34
CPSF4-203ENST00000430038 TMOD3Q9NYL9 352 aa23.41■■□□□ 1.34
CPSF4-203ENST00000430038 POLD1P28340 1107 aa23.4■■□□□ 1.34
CPSF4-203ENST00000430038 KLHL34Q8N239 644 aa23.4■■□□□ 1.34
CPSF4-203ENST00000430038 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
CPSF4-203ENST00000430038 KDM6AO15550 1401 aaPredicted RBP23.4■■□□□ 1.34
CPSF4-203ENST00000430038 SULT6B1Q6IMI4 303 aa23.37■■□□□ 1.33
CPSF4-203ENST00000430038 PLEKHO1Q53GL0 409 aaPredicted RBP23.36■■□□□ 1.33
CPSF4-203ENST00000430038 PHF14O94880 888 aa23.35■■□□□ 1.33
CPSF4-203ENST00000430038 MTHFSP49914 203 aa23.35■■□□□ 1.33
CPSF4-203ENST00000430038 ZNF530Q6P9A1 599 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms