RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 BTAF1O14981 1849 aa16.64■□□□□ 0.25
TTC3-208ENST00000428693 TATP17735 454 aaPredicted RBP16.64■□□□□ 0.25
TTC3-208ENST00000428693 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.25
TTC3-208ENST00000428693 CARD14Q9BXL6 1004 aa16.64■□□□□ 0.25
TTC3-208ENST00000428693 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
TTC3-208ENST00000428693 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
TTC3-208ENST00000428693 MEGF6O75095 1541 aa16.61■□□□□ 0.25
TTC3-208ENST00000428693 KCNQ4P56696 695 aa16.61■□□□□ 0.25
TTC3-208ENST00000428693 FLT4P35916 1363 aa16.61■□□□□ 0.25
TTC3-208ENST00000428693 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
TTC3-208ENST00000428693 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
TTC3-208ENST00000428693 CGNL1Q0VF96 1302 aa16.6■□□□□ 0.25
TTC3-208ENST00000428693 MYOM1P52179 1685 aa16.59■□□□□ 0.25
TTC3-208ENST00000428693 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
TTC3-208ENST00000428693 ZNF827Q17R98 1081 aa16.59■□□□□ 0.25
TTC3-208ENST00000428693 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
TTC3-208ENST00000428693 INSRP06213 1382 aa16.59■□□□□ 0.25
TTC3-208ENST00000428693 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
TTC3-208ENST00000428693 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.24
TTC3-208ENST00000428693 DOT1LQ8TEK3 1739 aa16.58■□□□□ 0.24
TTC3-208ENST00000428693 MSH5O43196 834 aa16.57■□□□□ 0.24
TTC3-208ENST00000428693 SLC27A3Q5K4L6 730 aa16.57■□□□□ 0.24
TTC3-208ENST00000428693 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
TTC3-208ENST00000428693 PTGER2P43116 358 aa16.56■□□□□ 0.24
TTC3-208ENST00000428693 CCNL1Q9UK58 526 aaPredicted RBP16.56■□□□□ 0.24
TTC3-208ENST00000428693 PCDH11XQ9BZA7 1347 aa16.55■□□□□ 0.24
TTC3-208ENST00000428693 PCDH11YQ9BZA8 1340 aa16.55■□□□□ 0.24
TTC3-208ENST00000428693 YY1P25490 414 aa16.55■□□□□ 0.24
TTC3-208ENST00000428693 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
TTC3-208ENST00000428693 MPRIPQ6WCQ1 1025 aa16.54■□□□□ 0.24
TTC3-208ENST00000428693 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
TTC3-208ENST00000428693 PANK3Q9H999 370 aa16.54■□□□□ 0.24
TTC3-208ENST00000428693 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
TTC3-208ENST00000428693 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
TTC3-208ENST00000428693 ARXQ96QS3 562 aa16.53■□□□□ 0.24
TTC3-208ENST00000428693 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.24
TTC3-208ENST00000428693 NSD2O96028 1365 aa16.51■□□□□ 0.23
TTC3-208ENST00000428693 WASHC2AQ641Q2 1341 aa16.51■□□□□ 0.23
TTC3-208ENST00000428693 POLD1P28340 1107 aa16.51■□□□□ 0.23
TTC3-208ENST00000428693 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
TTC3-208ENST00000428693 SPG7Q9UQ90 795 aa16.51■□□□□ 0.23
TTC3-208ENST00000428693 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
TTC3-208ENST00000428693 CYP27B1O15528 508 aa16.5■□□□□ 0.23
TTC3-208ENST00000428693 EYA1Q99502 592 aa16.5■□□□□ 0.23
TTC3-208ENST00000428693 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
TTC3-208ENST00000428693 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
TTC3-208ENST00000428693 ADRA2BP18089 450 aa16.49■□□□□ 0.23
TTC3-208ENST00000428693 MORC1Q86VD1 984 aa16.48■□□□□ 0.23
TTC3-208ENST00000428693 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
TTC3-208ENST00000428693 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
TTC3-208ENST00000428693 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
TTC3-208ENST00000428693 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
TTC3-208ENST00000428693 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
TTC3-208ENST00000428693 LY75O60449 1722 aa16.46■□□□□ 0.23
TTC3-208ENST00000428693 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
TTC3-208ENST00000428693 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
TTC3-208ENST00000428693 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
TTC3-208ENST00000428693 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
TTC3-208ENST00000428693 GPR162Q16538 588 aa16.44■□□□□ 0.22
TTC3-208ENST00000428693 PIGBQ92521 554 aa16.44■□□□□ 0.22
TTC3-208ENST00000428693 TUBGCP6Q96RT7 1819 aa16.43■□□□□ 0.22
TTC3-208ENST00000428693 ANKRD26Q9UPS8 1709 aa16.43■□□□□ 0.22
TTC3-208ENST00000428693 CNGB1Q14028 1251 aaPredicted RBP16.43■□□□□ 0.22
TTC3-208ENST00000428693 COL23A1Q86Y22 540 aaPredicted RBP16.43■□□□□ 0.22
TTC3-208ENST00000428693 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
TTC3-208ENST00000428693 AK7Q96M32 723 aa16.43■□□□□ 0.22
TTC3-208ENST00000428693 PHF14O94880 888 aa16.42■□□□□ 0.22
TTC3-208ENST00000428693 ITGB4P16144 1822 aa16.42■□□□□ 0.22
TTC3-208ENST00000428693 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
TTC3-208ENST00000428693 PHKG2P15735 406 aa16.41■□□□□ 0.22
TTC3-208ENST00000428693 HMGB2P26583 209 aaKnown RBP16.41■□□□□ 0.22
TTC3-208ENST00000428693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.41■□□□□ 0.228e-9■■■■□ 26.4
TTC3-208ENST00000428693 UTRNP46939 3433 aa16.41■□□□□ 0.22
TTC3-208ENST00000428693 QSER1Q2KHR3 1735 aa16.4■□□□□ 0.22
TTC3-208ENST00000428693 TOGARAM1Q9Y4F4 1720 aa16.4■□□□□ 0.22
TTC3-208ENST00000428693 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
TTC3-208ENST00000428693 C5P01031 1676 aa16.4■□□□□ 0.22
TTC3-208ENST00000428693 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
TTC3-208ENST00000428693 FLAD1Q8NFF5 587 aa16.39■□□□□ 0.21
TTC3-208ENST00000428693 ASAP1Q9ULH1 1129 aa16.39■□□□□ 0.21
TTC3-208ENST00000428693 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
TTC3-208ENST00000428693 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
TTC3-208ENST00000428693 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
TTC3-208ENST00000428693 SIK1P57059 783 aa16.38■□□□□ 0.21
TTC3-208ENST00000428693 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
TTC3-208ENST00000428693 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
TTC3-208ENST00000428693 IGSF1Q8N6C5 1336 aa16.38■□□□□ 0.21
TTC3-208ENST00000428693 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
TTC3-208ENST00000428693 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
TTC3-208ENST00000428693 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
TTC3-208ENST00000428693 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
TTC3-208ENST00000428693 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
TTC3-208ENST00000428693 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
TTC3-208ENST00000428693 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
TTC3-208ENST00000428693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
TTC3-208ENST00000428693 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
TTC3-208ENST00000428693 CABP4P57796 275 aa16.35■□□□□ 0.21
TTC3-208ENST00000428693 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
TTC3-208ENST00000428693 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
TTC3-208ENST00000428693 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms