RNA–Protein interactions for RNA: ENST00000428370.1

AC006001.3-205, humanhuman

BASIC

Gene AC006001.3, Length 579 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-205ENST00000428370 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
AC006001.3-205ENST00000428370 PUS7Q96PZ0 661 aaKnown RBP16.31■□□□□ 0.2
AC006001.3-205ENST00000428370 GOLGB1Q14789 3259 aaKnown RBP16.3■□□□□ 0.2
AC006001.3-205ENST00000428370 CD163L1Q9NR16 1453 aa16.3■□□□□ 0.2
AC006001.3-205ENST00000428370 CARD11Q9BXL7 1154 aa16.3■□□□□ 0.2
AC006001.3-205ENST00000428370 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
AC006001.3-205ENST00000428370 NSD2O96028 1365 aa16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 C5P01031 1676 aa16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 FAM208AQ9UK61 1670 aaKnown RBP16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
AC006001.3-205ENST00000428370 KIF3CO14782 793 aa16.27■□□□□ 0.2
AC006001.3-205ENST00000428370 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.2
AC006001.3-205ENST00000428370 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
AC006001.3-205ENST00000428370 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
AC006001.3-205ENST00000428370 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
AC006001.3-205ENST00000428370 APLP1P51693 650 aa16.25■□□□□ 0.19
AC006001.3-205ENST00000428370 NME9Q86XW9 330 aa16.25■□□□□ 0.19
AC006001.3-205ENST00000428370 TERF2IPQ9NYB0 399 aa16.25■□□□□ 0.19
AC006001.3-205ENST00000428370 TMC1Q8TDI8 760 aa16.24■□□□□ 0.19
AC006001.3-205ENST00000428370 SLC12A5Q9H2X9 1139 aa16.24■□□□□ 0.19
AC006001.3-205ENST00000428370 TAF1LQ8IZX4 1826 aa16.24■□□□□ 0.19
AC006001.3-205ENST00000428370 RGPD2P0DJD1 1756 aa16.23■□□□□ 0.19
AC006001.3-205ENST00000428370 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
AC006001.3-205ENST00000428370 USP47Q96K76 1375 aa16.23■□□□□ 0.19
AC006001.3-205ENST00000428370 WDR90Q96KV7 1748 aa16.22■□□□□ 0.19
AC006001.3-205ENST00000428370 IGSF1Q8N6C5 1336 aa16.22■□□□□ 0.19
AC006001.3-205ENST00000428370 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
AC006001.3-205ENST00000428370 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
AC006001.3-205ENST00000428370 CAPN15O75808 1086 aa16.21■□□□□ 0.19
AC006001.3-205ENST00000428370 TOGARAM1Q9Y4F4 1720 aa16.19■□□□□ 0.18
AC006001.3-205ENST00000428370 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
AC006001.3-205ENST00000428370 MEGF6O75095 1541 aa16.19■□□□□ 0.18
AC006001.3-205ENST00000428370 COL13A1Q5TAT6 717 aaPredicted RBP16.18■□□□□ 0.18
AC006001.3-205ENST00000428370 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
AC006001.3-205ENST00000428370 IP6K1Q92551 441 aa16.18■□□□□ 0.18
AC006001.3-205ENST00000428370 TESK2Q96S53 571 aa16.18■□□□□ 0.18
AC006001.3-205ENST00000428370 C4BP0C0L5 1744 aa16.18■□□□□ 0.18
AC006001.3-205ENST00000428370 TOMM70O94826 608 aa16.17■□□□□ 0.18
AC006001.3-205ENST00000428370 FLAD1Q8NFF5 587 aa16.17■□□□□ 0.18
AC006001.3-205ENST00000428370 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
AC006001.3-205ENST00000428370 ST20-MTHFSA0A0A6YYL1 179 aa16.14■□□□□ 0.17
AC006001.3-205ENST00000428370 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
AC006001.3-205ENST00000428370 COG3Q96JB2 828 aa16.14■□□□□ 0.17
AC006001.3-205ENST00000428370 PALLDQ8WX93 1383 aa16.13■□□□□ 0.17
AC006001.3-205ENST00000428370 PHF14O94880 888 aa16.13■□□□□ 0.17
AC006001.3-205ENST00000428370 HTRA3P83110 453 aa16.13■□□□□ 0.17
AC006001.3-205ENST00000428370 AMIGO3Q86WK7 504 aa16.13■□□□□ 0.17
AC006001.3-205ENST00000428370 N4BP2Q86UW6 1770 aaPredicted RBP16.13■□□□□ 0.17
AC006001.3-205ENST00000428370 KIAA1551Q9HCM1 1747 aa16.12■□□□□ 0.17
AC006001.3-205ENST00000428370 AK7Q96M32 723 aa16.12■□□□□ 0.17
AC006001.3-205ENST00000428370 NMRK2Q9NPI5 230 aa16.12■□□□□ 0.17
AC006001.3-205ENST00000428370 ITGB4P16144 1822 aa16.11■□□□□ 0.17
AC006001.3-205ENST00000428370 HOXC9P31274 260 aa16.11■□□□□ 0.17
AC006001.3-205ENST00000428370 TNS4Q8IZW8 715 aa16.11■□□□□ 0.17
AC006001.3-205ENST00000428370 KLRG1Q96E93 195 aa16.11■□□□□ 0.17
AC006001.3-205ENST00000428370 MAP3K19Q56UN5 1328 aa16.11■□□□□ 0.17
AC006001.3-205ENST00000428370 RTL1A6NKG5 1358 aa16.11■□□□□ 0.17
AC006001.3-205ENST00000428370 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
AC006001.3-205ENST00000428370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
AC006001.3-205ENST00000428370 AMPHP49418 695 aa16.09■□□□□ 0.17
AC006001.3-205ENST00000428370 USHBP1Q8N6Y0 703 aa16.09■□□□□ 0.17
AC006001.3-205ENST00000428370 JMYQ8N9B5 988 aa16.09■□□□□ 0.17
AC006001.3-205ENST00000428370 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
AC006001.3-205ENST00000428370 FBLN1P23142 703 aa16.08■□□□□ 0.16
AC006001.3-205ENST00000428370 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.16
AC006001.3-205ENST00000428370 PRELPP51888 382 aa16.08■□□□□ 0.16
AC006001.3-205ENST00000428370 TMF1P82094 1093 aa16.08■□□□□ 0.16
AC006001.3-205ENST00000428370 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.16
AC006001.3-205ENST00000428370 NSD3Q9BZ95 1437 aa16.08■□□□□ 0.16
AC006001.3-205ENST00000428370 RBM46Q8TBY0 533 aaKnown RBP16.07■□□□□ 0.16
AC006001.3-205ENST00000428370 BCS1LQ9Y276 419 aa16.07■□□□□ 0.16
AC006001.3-205ENST00000428370 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
AC006001.3-205ENST00000428370 FYB1O15117 783 aa16.06■□□□□ 0.16
AC006001.3-205ENST00000428370 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
AC006001.3-205ENST00000428370 NBPF6Q5VWK0 638 aa16.06■□□□□ 0.16
AC006001.3-205ENST00000428370 C16orf71Q8IYS4 520 aaPredicted RBP16.06■□□□□ 0.16
AC006001.3-205ENST00000428370 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
AC006001.3-205ENST00000428370 NBPF4Q96M43 638 aa16.06■□□□□ 0.16
AC006001.3-205ENST00000428370 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
AC006001.3-205ENST00000428370 PKD1L3Q7Z443 1732 aa16.05■□□□□ 0.16
AC006001.3-205ENST00000428370 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
AC006001.3-205ENST00000428370 ARHGAP27Q6ZUM4 889 aa16.05■□□□□ 0.16
AC006001.3-205ENST00000428370 SMG6Q86US8 1419 aaKnown RBP16.04■□□□□ 0.16
AC006001.3-205ENST00000428370 BRCA1P38398 1863 aaKnown RBP16.04■□□□□ 0.16
AC006001.3-205ENST00000428370 PCDH11XQ9BZA7 1347 aa16.04■□□□□ 0.16
AC006001.3-205ENST00000428370 PCDH11YQ9BZA8 1340 aa16.04■□□□□ 0.16
AC006001.3-205ENST00000428370 TATP17735 454 aaPredicted RBP16.04■□□□□ 0.16
AC006001.3-205ENST00000428370 SSFA2P28290 1259 aa16.04■□□□□ 0.16
AC006001.3-205ENST00000428370 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
AC006001.3-205ENST00000428370 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
AC006001.3-205ENST00000428370 A0A0G2JLW4 131 aa16.02■□□□□ 0.16
AC006001.3-205ENST00000428370 MMP10P09238 476 aa16.02■□□□□ 0.16
AC006001.3-205ENST00000428370 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.16
AC006001.3-205ENST00000428370 KCPQ6ZWJ8 1503 aa16.02■□□□□ 0.15
AC006001.3-205ENST00000428370 INSRP06213 1382 aa16.01■□□□□ 0.15
AC006001.3-205ENST00000428370 GNPATO15228 680 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms