RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 PCNTO95613 3336 aa17.36■□□□□ 0.37
DDX39B-208ENST00000428098 KLRG1Q96E93 195 aa17.36■□□□□ 0.37
DDX39B-208ENST00000428098 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
DDX39B-208ENST00000428098 LY75O60449 1722 aa17.34■□□□□ 0.37
DDX39B-208ENST00000428098 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
DDX39B-208ENST00000428098 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
DDX39B-208ENST00000428098 NMRK2Q9NPI5 230 aa17.34■□□□□ 0.37
DDX39B-208ENST00000428098 SMIM5Q71RC9 77 aa17.32■□□□□ 0.36
DDX39B-208ENST00000428098 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
DDX39B-208ENST00000428098 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
DDX39B-208ENST00000428098 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
DDX39B-208ENST00000428098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDX39B-208ENST00000428098 WDR90Q96KV7 1748 aa17.28■□□□□ 0.36
DDX39B-208ENST00000428098 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
DDX39B-208ENST00000428098 NME9Q86XW9 330 aa17.28■□□□□ 0.36
DDX39B-208ENST00000428098 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
DDX39B-208ENST00000428098 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
DDX39B-208ENST00000428098 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
DDX39B-208ENST00000428098 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
DDX39B-208ENST00000428098 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
DDX39B-208ENST00000428098 SLC34A2O95436 690 aa17.26■□□□□ 0.35
DDX39B-208ENST00000428098 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
DDX39B-208ENST00000428098 USP47Q96K76 1375 aa17.26■□□□□ 0.35
DDX39B-208ENST00000428098 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
DDX39B-208ENST00000428098 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
DDX39B-208ENST00000428098 IP6K1Q92551 441 aa17.23■□□□□ 0.35
DDX39B-208ENST00000428098 LTN1O94822 1766 aa17.22■□□□□ 0.35
DDX39B-208ENST00000428098 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
DDX39B-208ENST00000428098 FSTL1Q12841 308 aa17.21■□□□□ 0.35
DDX39B-208ENST00000428098 ARHGAP27Q6ZUM4 889 aa17.21■□□□□ 0.35
DDX39B-208ENST00000428098 PHF14O94880 888 aa17.2■□□□□ 0.34
DDX39B-208ENST00000428098 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
DDX39B-208ENST00000428098 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
DDX39B-208ENST00000428098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.19■□□□□ 0.34
DDX39B-208ENST00000428098 A0A0G2JLW4 131 aa17.19■□□□□ 0.34
DDX39B-208ENST00000428098 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
DDX39B-208ENST00000428098 C5P01031 1676 aa17.19■□□□□ 0.34
DDX39B-208ENST00000428098 HSPA1AP0DMV8 641 aaKnown RBP17.17■□□□□ 0.34
DDX39B-208ENST00000428098 HSPA1BP0DMV9 641 aaKnown RBP17.17■□□□□ 0.34
DDX39B-208ENST00000428098 FBLN1P23142 703 aa17.17■□□□□ 0.34
DDX39B-208ENST00000428098 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
DDX39B-208ENST00000428098 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
DDX39B-208ENST00000428098 MEGF6O75095 1541 aa17.16■□□□□ 0.34
DDX39B-208ENST00000428098 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
DDX39B-208ENST00000428098 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
DDX39B-208ENST00000428098 C9orf131Q5VYM1 1079 aa17.16■□□□□ 0.34
DDX39B-208ENST00000428098 AK7Q96M32 723 aa17.16■□□□□ 0.34
DDX39B-208ENST00000428098 RRAGCQ9HB90 399 aa17.16■□□□□ 0.34
DDX39B-208ENST00000428098 PXDNLA1KZ92 1463 aa17.16■□□□□ 0.34
DDX39B-208ENST00000428098 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
DDX39B-208ENST00000428098 CD163L1Q9NR16 1453 aa17.15■□□□□ 0.34
DDX39B-208ENST00000428098 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
DDX39B-208ENST00000428098 MON2Q7Z3U7 1717 aa17.14■□□□□ 0.33
DDX39B-208ENST00000428098 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
DDX39B-208ENST00000428098 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
DDX39B-208ENST00000428098 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
DDX39B-208ENST00000428098 MMP10P09238 476 aa17.13■□□□□ 0.33
DDX39B-208ENST00000428098 DPEP1P16444 411 aa17.13■□□□□ 0.33
DDX39B-208ENST00000428098 HOXC9P31274 260 aa17.13■□□□□ 0.33
DDX39B-208ENST00000428098 TGFB2P61812 414 aa17.13■□□□□ 0.33
DDX39B-208ENST00000428098 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
DDX39B-208ENST00000428098 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
DDX39B-208ENST00000428098 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
DDX39B-208ENST00000428098 LINC00116Q8NCU8 138 aa17.12■□□□□ 0.33
DDX39B-208ENST00000428098 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
DDX39B-208ENST00000428098 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
DDX39B-208ENST00000428098 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
DDX39B-208ENST00000428098 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
DDX39B-208ENST00000428098 FCHSD2O94868 740 aa17.11■□□□□ 0.33
DDX39B-208ENST00000428098 KCNA3P22001 575 aa17.11■□□□□ 0.33
DDX39B-208ENST00000428098 HMGB2P26583 209 aaKnown RBP17.11■□□□□ 0.33
DDX39B-208ENST00000428098 SSFA2P28290 1259 aa17.11■□□□□ 0.33
DDX39B-208ENST00000428098 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
DDX39B-208ENST00000428098 PIGBQ92521 554 aa17.09■□□□□ 0.33
DDX39B-208ENST00000428098 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
DDX39B-208ENST00000428098 CYP27B1O15528 508 aa17.08■□□□□ 0.32
DDX39B-208ENST00000428098 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.32
DDX39B-208ENST00000428098 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
DDX39B-208ENST00000428098 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
DDX39B-208ENST00000428098 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
DDX39B-208ENST00000428098 ITPK1Q13572 414 aa17.07■□□□□ 0.32
DDX39B-208ENST00000428098 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
DDX39B-208ENST00000428098 GNPATO15228 680 aa17.06■□□□□ 0.32
DDX39B-208ENST00000428098 AMPHP49418 695 aa17.06■□□□□ 0.32
DDX39B-208ENST00000428098 SIK1P57059 783 aa17.06■□□□□ 0.32
DDX39B-208ENST00000428098 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
DDX39B-208ENST00000428098 RNF181Q9P0P0 153 aa17.06■□□□□ 0.32
DDX39B-208ENST00000428098 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
DDX39B-208ENST00000428098 CGNL1Q0VF96 1302 aa17.05■□□□□ 0.32
DDX39B-208ENST00000428098 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
DDX39B-208ENST00000428098 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
DDX39B-208ENST00000428098 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
DDX39B-208ENST00000428098 PLEKHG2Q9H7P9 1386 aa17.04■□□□□ 0.32
DDX39B-208ENST00000428098 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
DDX39B-208ENST00000428098 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
DDX39B-208ENST00000428098 TMF1P82094 1093 aa17.03■□□□□ 0.32
DDX39B-208ENST00000428098 NLGN1Q8N2Q7 840 aa17.03■□□□□ 0.32
DDX39B-208ENST00000428098 DCAF5Q96JK2 942 aa17.03■□□□□ 0.32
DDX39B-208ENST00000428098 MAP2P11137 1827 aaKnown RBP17.03■□□□□ 0.32
DDX39B-208ENST00000428098 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms