RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 BCL11BQ9C0K0 894 aaPredicted RBP20.32■□□□□ 0.84
RTN4-210ENST00000427710 BTAF1O14981 1849 aa20.32■□□□□ 0.84
RTN4-210ENST00000427710 BCL9O00512 1426 aa20.31■□□□□ 0.84
RTN4-210ENST00000427710 PSDA5PKW4 1024 aaPredicted RBP20.31■□□□□ 0.84
RTN4-210ENST00000427710 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
RTN4-210ENST00000427710 ZCRB1Q8TBF4 217 aaKnown RBP20.31■□□□□ 0.84
RTN4-210ENST00000427710 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
RTN4-210ENST00000427710 EYA1Q99502 592 aa20.31■□□□□ 0.84
RTN4-210ENST00000427710 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
RTN4-210ENST00000427710 TATP17735 454 aaPredicted RBP20.3■□□□□ 0.84
RTN4-210ENST00000427710 RGPD3A6NKT7 1758 aaPredicted RBP20.26■□□□□ 0.83
RTN4-210ENST00000427710 RGPD4Q7Z3J3 1758 aa20.26■□□□□ 0.83
RTN4-210ENST00000427710 PKD1L3Q7Z443 1732 aa20.26■□□□□ 0.83
RTN4-210ENST00000427710 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
RTN4-210ENST00000427710 R3HDM1Q15032 1099 aaKnown RBP20.25■□□□□ 0.83
RTN4-210ENST00000427710 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
RTN4-210ENST00000427710 PLSCR1O15162 318 aa20.23■□□□□ 0.83
RTN4-210ENST00000427710 PROM2Q8N271 834 aa20.23■□□□□ 0.83
RTN4-210ENST00000427710 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
RTN4-210ENST00000427710 ITGB4P16144 1822 aa20.23■□□□□ 0.83
RTN4-210ENST00000427710 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
RTN4-210ENST00000427710 MTHFSP49914 203 aa20.22■□□□□ 0.83
RTN4-210ENST00000427710 CYP27B1O15528 508 aa20.21■□□□□ 0.83
RTN4-210ENST00000427710 TOGARAM1Q9Y4F4 1720 aa20.21■□□□□ 0.83
RTN4-210ENST00000427710 AEBP1Q8IUX7 1158 aa20.2■□□□□ 0.82
RTN4-210ENST00000427710 IGSF1Q8N6C5 1336 aa20.2■□□□□ 0.82
RTN4-210ENST00000427710 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
RTN4-210ENST00000427710 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
RTN4-210ENST00000427710 TXNRD1Q16881 649 aa20.19■□□□□ 0.82
RTN4-210ENST00000427710 NPC1L1Q9UHC9 1359 aa20.19■□□□□ 0.82
RTN4-210ENST00000427710 IL13P35225 146 aa20.18■□□□□ 0.82
RTN4-210ENST00000427710 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
RTN4-210ENST00000427710 SRCAPQ6ZRS2 3230 aa20.17■□□□□ 0.82
RTN4-210ENST00000427710 NBPF14Q5TI25 921 aa20.17■□□□□ 0.82
RTN4-210ENST00000427710 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
RTN4-210ENST00000427710 SULT6B1Q6IMI4 303 aa20.15■□□□□ 0.82
RTN4-210ENST00000427710 LY75O60449 1722 aa20.14■□□□□ 0.81
RTN4-210ENST00000427710 KCNQ4P56696 695 aa20.14■□□□□ 0.81
RTN4-210ENST00000427710 VIRMAQ69YN4 1812 aaKnown RBP20.12■□□□□ 0.81
RTN4-210ENST00000427710 HMOX1P09601 288 aa20.12■□□□□ 0.81
RTN4-210ENST00000427710 MPRIPQ6WCQ1 1025 aa20.12■□□□□ 0.81
RTN4-210ENST00000427710 PHKG2P15735 406 aa20.11■□□□□ 0.81
RTN4-210ENST00000427710 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
RTN4-210ENST00000427710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.11■□□□□ 0.81
RTN4-210ENST00000427710 COL3A1P02461 1466 aaPredicted RBP20.11■□□□□ 0.81
RTN4-210ENST00000427710 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
RTN4-210ENST00000427710 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
RTN4-210ENST00000427710 PAPPAQ13219 1627 aa20.09■□□□□ 0.81
RTN4-210ENST00000427710 NKX1-1Q15270 411 aaPredicted RBP20.09■□□□□ 0.81
RTN4-210ENST00000427710 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
RTN4-210ENST00000427710 PDGFDQ9GZP0 370 aaPredicted RBP20.09■□□□□ 0.81
RTN4-210ENST00000427710 TUBGCP6Q96RT7 1819 aa20.09■□□□□ 0.81
RTN4-210ENST00000427710 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
RTN4-210ENST00000427710 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
RTN4-210ENST00000427710 ZNF530Q6P9A1 599 aaPredicted RBP20.08■□□□□ 0.81
RTN4-210ENST00000427710 STK32BQ9NY57 414 aa20.08■□□□□ 0.81
RTN4-210ENST00000427710 CASZ1Q86V15 1759 aa20.08■□□□□ 0.8
RTN4-210ENST00000427710 LRP5O75197 1615 aa20.07■□□□□ 0.8
RTN4-210ENST00000427710 KDRP35968 1356 aa20.07■□□□□ 0.8
RTN4-210ENST00000427710 TAF1LQ8IZX4 1826 aa20.06■□□□□ 0.8
RTN4-210ENST00000427710 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
RTN4-210ENST00000427710 SLC15A2Q16348 729 aa20.06■□□□□ 0.8
RTN4-210ENST00000427710 ZNF827Q17R98 1081 aa20.06■□□□□ 0.8
RTN4-210ENST00000427710 PIGBQ92521 554 aa20.06■□□□□ 0.8
RTN4-210ENST00000427710 SCN11AQ9UI33 1791 aa20.04■□□□□ 0.8
RTN4-210ENST00000427710 CCNL1Q9UK58 526 aaPredicted RBP20.04■□□□□ 0.8
RTN4-210ENST00000427710 KDM6AO15550 1401 aaPredicted RBP20.03■□□□□ 0.8
RTN4-210ENST00000427710 AMOTQ4VCS5 1084 aa20.03■□□□□ 0.8
RTN4-210ENST00000427710 SLC27A3Q5K4L6 730 aa20.03■□□□□ 0.8
RTN4-210ENST00000427710 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.8
RTN4-210ENST00000427710 TMOD3Q9NYL9 352 aa20.02■□□□□ 0.8
RTN4-210ENST00000427710 PALLDQ8WX93 1383 aa20.02■□□□□ 0.8
RTN4-210ENST00000427710 C5P01031 1676 aa20.02■□□□□ 0.8
RTN4-210ENST00000427710 PLEKHG2Q9H7P9 1386 aa20.01■□□□□ 0.79
RTN4-210ENST00000427710 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
RTN4-210ENST00000427710 ASAP1Q9ULH1 1129 aa20.01■□□□□ 0.79
RTN4-210ENST00000427710 ZBTB7AO95365 584 aa20■□□□□ 0.79
RTN4-210ENST00000427710 AKT1S1Q96B36 256 aa20■□□□□ 0.79
RTN4-210ENST00000427710 CFAP53Q96M91 514 aa20■□□□□ 0.79
RTN4-210ENST00000427710 QSER1Q2KHR3 1735 aa19.99■□□□□ 0.79
RTN4-210ENST00000427710 DCAF5Q96JK2 942 aa19.99■□□□□ 0.79
RTN4-210ENST00000427710 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
RTN4-210ENST00000427710 MTHFSDQ2M296 383 aaKnown RBP19.98■□□□□ 0.79
RTN4-210ENST00000427710 ERVV-2B6SEH9 535 aa19.97■□□□□ 0.79
RTN4-210ENST00000427710 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
RTN4-210ENST00000427710 ATG3Q9NT62 314 aa19.97■□□□□ 0.79
RTN4-210ENST00000427710 ATF5Q9Y2D1 282 aaPredicted RBP19.97■□□□□ 0.79
RTN4-210ENST00000427710 CABP4P57796 275 aa19.96■□□□□ 0.79
RTN4-210ENST00000427710 AKAP4Q5JQC9 854 aa19.96■□□□□ 0.79
RTN4-210ENST00000427710 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
RTN4-210ENST00000427710 SPON1Q9HCB6 807 aa19.95■□□□□ 0.78
RTN4-210ENST00000427710 TFCP2L1Q9NZI6 479 aa19.95■□□□□ 0.78
RTN4-210ENST00000427710 C4BP0C0L5 1744 aa19.94■□□□□ 0.78
RTN4-210ENST00000427710 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
RTN4-210ENST00000427710 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.78
RTN4-210ENST00000427710 NFATC2IPQ8NCF5 419 aa19.94■□□□□ 0.78
RTN4-210ENST00000427710 PNPLA7Q6ZV29 1317 aa19.94■□□□□ 0.78
RTN4-210ENST00000427710 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
RTN4-210ENST00000427710 PRKAR2BP31323 418 aa19.93■□□□□ 0.78
RTN4-210ENST00000427710 SIK1P57059 783 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms