RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
RCC1-207ENST00000427469 CGNL1Q0VF96 1302 aa18.17■□□□□ 0.5
RCC1-207ENST00000427469 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
RCC1-207ENST00000427469 COL24A1Q17RW2 1714 aa18.16■□□□□ 0.5
RCC1-207ENST00000427469 HSP90AB2PQ58FF8 381 aa18.16■□□□□ 0.5
RCC1-207ENST00000427469 NBPF6Q5VWK0 638 aa18.16■□□□□ 0.5
RCC1-207ENST00000427469 NBPF4Q96M43 638 aa18.16■□□□□ 0.5
RCC1-207ENST00000427469 EMILIN1Q9Y6C2 1016 aa18.16■□□□□ 0.5
RCC1-207ENST00000427469 NSD2O96028 1365 aa18.16■□□□□ 0.5
RCC1-207ENST00000427469 TXNRD1Q16881 649 aa18.11■□□□□ 0.49
RCC1-207ENST00000427469 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
RCC1-207ENST00000427469 ACSBG1Q96GR2 724 aa18.11■□□□□ 0.49
RCC1-207ENST00000427469 VIRMAQ69YN4 1812 aaKnown RBP18.1■□□□□ 0.49
RCC1-207ENST00000427469 C5P01031 1676 aa18.1■□□□□ 0.49
RCC1-207ENST00000427469 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
RCC1-207ENST00000427469 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
RCC1-207ENST00000427469 PANK3Q9H999 370 aa18.09■□□□□ 0.49
RCC1-207ENST00000427469 POLKQ9UBT6 870 aa18.09■□□□□ 0.49
RCC1-207ENST00000427469 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
RCC1-207ENST00000427469 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
RCC1-207ENST00000427469 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
RCC1-207ENST00000427469 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
RCC1-207ENST00000427469 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
RCC1-207ENST00000427469 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
RCC1-207ENST00000427469 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
RCC1-207ENST00000427469 PCDH11XQ9BZA7 1347 aa18.04■□□□□ 0.48
RCC1-207ENST00000427469 PCDH11YQ9BZA8 1340 aa18.04■□□□□ 0.48
RCC1-207ENST00000427469 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
RCC1-207ENST00000427469 EYA1Q99502 592 aa18.03■□□□□ 0.48
RCC1-207ENST00000427469 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
RCC1-207ENST00000427469 CYP27B1O15528 508 aa18.02■□□□□ 0.48
RCC1-207ENST00000427469 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
RCC1-207ENST00000427469 SLC15A2Q16348 729 aa18.02■□□□□ 0.48
RCC1-207ENST00000427469 IGSF1Q8N6C5 1336 aa18.01■□□□□ 0.47
RCC1-207ENST00000427469 PRIM1P49642 420 aaKnown RBP18.01■□□□□ 0.47
RCC1-207ENST00000427469 EIF4A2Q14240 407 aaKnown RBP18.01■□□□□ 0.47
RCC1-207ENST00000427469 ZNF827Q17R98 1081 aa18.01■□□□□ 0.47
RCC1-207ENST00000427469 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
RCC1-207ENST00000427469 SCN11AQ9UI33 1791 aa18.01■□□□□ 0.47
RCC1-207ENST00000427469 UTRNP46939 3433 aa18.01■□□□□ 0.47
RCC1-207ENST00000427469 ZNF831Q5JPB2 1677 aa18■□□□□ 0.47
RCC1-207ENST00000427469 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
RCC1-207ENST00000427469 GOLGB1Q14789 3259 aaKnown RBP17.99■□□□□ 0.47
RCC1-207ENST00000427469 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
RCC1-207ENST00000427469 SPON1Q9HCB6 807 aa17.99■□□□□ 0.47
RCC1-207ENST00000427469 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
RCC1-207ENST00000427469 SLC27A3Q5K4L6 730 aa17.98■□□□□ 0.47
RCC1-207ENST00000427469 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
RCC1-207ENST00000427469 STK32BQ9NY57 414 aa17.98■□□□□ 0.47
RCC1-207ENST00000427469 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
RCC1-207ENST00000427469 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
RCC1-207ENST00000427469 PTGER2P43116 358 aa17.97■□□□□ 0.47
RCC1-207ENST00000427469 NKX1-1Q15270 411 aaPredicted RBP17.97■□□□□ 0.47
RCC1-207ENST00000427469 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
RCC1-207ENST00000427469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.96■□□□□ 0.47
RCC1-207ENST00000427469 KDRP35968 1356 aa17.95■□□□□ 0.46
RCC1-207ENST00000427469 CICQ96RK0 1608 aaPredicted RBP17.95■□□□□ 0.46
RCC1-207ENST00000427469 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
RCC1-207ENST00000427469 SYTL4Q96C24 671 aaPredicted RBP17.95■□□□□ 0.46
RCC1-207ENST00000427469 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
RCC1-207ENST00000427469 ADAMTS7Q9UKP4 1686 aa17.95■□□□□ 0.46
RCC1-207ENST00000427469 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
RCC1-207ENST00000427469 ZBTB7AO95365 584 aa17.93■□□□□ 0.46
RCC1-207ENST00000427469 KCNQ4P56696 695 aa17.93■□□□□ 0.46
RCC1-207ENST00000427469 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
RCC1-207ENST00000427469 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
RCC1-207ENST00000427469 PNPLA7Q6ZV29 1317 aa17.92■□□□□ 0.46
RCC1-207ENST00000427469 KDM6AO15550 1401 aaPredicted RBP17.91■□□□□ 0.46
RCC1-207ENST00000427469 PHKG2P15735 406 aa17.91■□□□□ 0.46
RCC1-207ENST00000427469 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
RCC1-207ENST00000427469 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
RCC1-207ENST00000427469 MYH14Q7Z406 1995 aaKnown RBP17.9■□□□□ 0.46
RCC1-207ENST00000427469 CHD4Q14839 1912 aa17.9■□□□□ 0.46
RCC1-207ENST00000427469 IL13P35225 146 aa17.89■□□□□ 0.45
RCC1-207ENST00000427469 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
RCC1-207ENST00000427469 TJP1Q07157 1748 aa17.89■□□□□ 0.45
RCC1-207ENST00000427469 AEBP1Q8IUX7 1158 aa17.88■□□□□ 0.45
RCC1-207ENST00000427469 PIGBQ92521 554 aa17.88■□□□□ 0.45
RCC1-207ENST00000427469 MAP3K5Q99683 1374 aa17.88■□□□□ 0.45
RCC1-207ENST00000427469 C4AP0C0L4 1744 aa17.87■□□□□ 0.45
RCC1-207ENST00000427469 SIPA1L3O60292 1781 aaPredicted RBP17.87■□□□□ 0.45
RCC1-207ENST00000427469 IFNL2Q8IZJ0 200 aa17.87■□□□□ 0.45
RCC1-207ENST00000427469 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
RCC1-207ENST00000427469 MRC1P22897 1456 aa17.87■□□□□ 0.45
RCC1-207ENST00000427469 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
RCC1-207ENST00000427469 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
RCC1-207ENST00000427469 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
RCC1-207ENST00000427469 MTHFSP49914 203 aa17.84■□□□□ 0.45
RCC1-207ENST00000427469 SLC16A10Q8TF71 515 aa17.84■□□□□ 0.45
RCC1-207ENST00000427469 SMARCC1Q92922 1105 aaPredicted RBP17.83■□□□□ 0.44
RCC1-207ENST00000427469 CC2D1BQ5T0F9 858 aaKnown RBP17.82■□□□□ 0.44
RCC1-207ENST00000427469 AMIGO3Q86WK7 504 aa17.82■□□□□ 0.44
RCC1-207ENST00000427469 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
RCC1-207ENST00000427469 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
RCC1-207ENST00000427469 AMOTQ4VCS5 1084 aa17.81■□□□□ 0.44
RCC1-207ENST00000427469 SULT6B1Q6IMI4 303 aa17.81■□□□□ 0.44
RCC1-207ENST00000427469 FHDC1Q9C0D6 1143 aaPredicted RBP17.81■□□□□ 0.44
RCC1-207ENST00000427469 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
RCC1-207ENST00000427469 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
RCC1-207ENST00000427469 LOC102724428A0A0B4J2F2 783 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms