RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
FARP1-204ENST00000427404 WASHC2AQ641Q2 1341 aa9.94□□□□□ -0.82
FARP1-204ENST00000427404 HSP90AB2PQ58FF8 381 aa9.94□□□□□ -0.82
FARP1-204ENST00000427404 NBPF6Q5VWK0 638 aa9.94□□□□□ -0.82
FARP1-204ENST00000427404 NBPF4Q96M43 638 aa9.94□□□□□ -0.82
FARP1-204ENST00000427404 LRP5O75197 1615 aa9.93□□□□□ -0.82
FARP1-204ENST00000427404 SRCAPQ6ZRS2 3230 aa9.93□□□□□ -0.82
FARP1-204ENST00000427404 POLKQ9UBT6 870 aa9.93□□□□□ -0.82
FARP1-204ENST00000427404 PTF1AQ7RTS3 328 aa9.92□□□□□ -0.82
FARP1-204ENST00000427404 PLEKHG2Q9H7P9 1386 aa9.91□□□□□ -0.82
FARP1-204ENST00000427404 PKD1L3Q7Z443 1732 aa9.91□□□□□ -0.82
FARP1-204ENST00000427404 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
FARP1-204ENST00000427404 ZCRB1Q8TBF4 217 aaKnown RBP9.91□□□□□ -0.82
FARP1-204ENST00000427404 RAPGEF4Q8WZA2 1011 aa9.91□□□□□ -0.82
FARP1-204ENST00000427404 KNSTRNQ9Y448 316 aa9.91□□□□□ -0.82
FARP1-204ENST00000427404 BTAF1O14981 1849 aa9.91□□□□□ -0.82
FARP1-204ENST00000427404 KCNQ2O43526 872 aa9.9□□□□□ -0.82
FARP1-204ENST00000427404 TATP17735 454 aaPredicted RBP9.9□□□□□ -0.82
FARP1-204ENST00000427404 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
FARP1-204ENST00000427404 USHBP1Q8N6Y0 703 aa9.9□□□□□ -0.82
FARP1-204ENST00000427404 DOT1LQ8TEK3 1739 aa9.9□□□□□ -0.83
FARP1-204ENST00000427404 NPC1L1Q9UHC9 1359 aa9.89□□□□□ -0.83
FARP1-204ENST00000427404 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
FARP1-204ENST00000427404 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
FARP1-204ENST00000427404 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
FARP1-204ENST00000427404 R3HDM1Q15032 1099 aaKnown RBP9.89□□□□□ -0.83
FARP1-204ENST00000427404 PROM2Q8N271 834 aa9.89□□□□□ -0.83
FARP1-204ENST00000427404 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
FARP1-204ENST00000427404 ACSBG1Q96GR2 724 aa9.89□□□□□ -0.83
FARP1-204ENST00000427404 PCDH11XQ9BZA7 1347 aa9.88□□□□□ -0.83
FARP1-204ENST00000427404 PCDH11YQ9BZA8 1340 aa9.88□□□□□ -0.83
FARP1-204ENST00000427404 TNNT2P45379 298 aaPredicted RBP9.88□□□□□ -0.83
FARP1-204ENST00000427404 EIF4A2Q14240 407 aaKnown RBP9.88□□□□□ -0.83
FARP1-204ENST00000427404 TXNRD1Q16881 649 aa9.88□□□□□ -0.83
FARP1-204ENST00000427404 MORC1Q86VD1 984 aa9.88□□□□□ -0.83
FARP1-204ENST00000427404 EYA1Q99502 592 aa9.88□□□□□ -0.83
FARP1-204ENST00000427404 PAPPAQ13219 1627 aa9.88□□□□□ -0.83
FARP1-204ENST00000427404 IGSF1Q8N6C5 1336 aa9.87□□□□□ -0.83
FARP1-204ENST00000427404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.83
FARP1-204ENST00000427404 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
FARP1-204ENST00000427404 CASZ1Q86V15 1759 aa9.86□□□□□ -0.83
FARP1-204ENST00000427404 LY75O60449 1722 aa9.85□□□□□ -0.83
FARP1-204ENST00000427404 TOGARAM1Q9Y4F4 1720 aa9.85□□□□□ -0.83
FARP1-204ENST00000427404 CYP27B1O15528 508 aa9.85□□□□□ -0.83
FARP1-204ENST00000427404 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
FARP1-204ENST00000427404 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
FARP1-204ENST00000427404 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
FARP1-204ENST00000427404 KAT6BQ8WYB5 2073 aa9.84□□□□□ -0.83
FARP1-204ENST00000427404 SLC27A3Q5K4L6 730 aa9.84□□□□□ -0.83
FARP1-204ENST00000427404 SLC15A2Q16348 729 aa9.83□□□□□ -0.84
FARP1-204ENST00000427404 STK32BQ9NY57 414 aa9.83□□□□□ -0.84
FARP1-204ENST00000427404 KDRP35968 1356 aa9.83□□□□□ -0.84
FARP1-204ENST00000427404 QSER1Q2KHR3 1735 aa9.82□□□□□ -0.84
FARP1-204ENST00000427404 ITGB4P16144 1822 aa9.82□□□□□ -0.84
FARP1-204ENST00000427404 IL13P35225 146 aa9.82□□□□□ -0.84
FARP1-204ENST00000427404 CC2D1BQ5T0F9 858 aaKnown RBP9.82□□□□□ -0.84
FARP1-204ENST00000427404 SYTL4Q96C24 671 aaPredicted RBP9.82□□□□□ -0.84
FARP1-204ENST00000427404 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
FARP1-204ENST00000427404 COL3A1P02461 1466 aaPredicted RBP9.81□□□□□ -0.84
FARP1-204ENST00000427404 PHKG2P15735 406 aa9.81□□□□□ -0.84
FARP1-204ENST00000427404 MTHFSP49914 203 aa9.81□□□□□ -0.84
FARP1-204ENST00000427404 IFNL2Q8IZJ0 200 aa9.81□□□□□ -0.84
FARP1-204ENST00000427404 ZNF827Q17R98 1081 aa9.8□□□□□ -0.84
FARP1-204ENST00000427404 AMOTQ4VCS5 1084 aa9.8□□□□□ -0.84
FARP1-204ENST00000427404 AKT1S1Q96B36 256 aa9.8□□□□□ -0.84
FARP1-204ENST00000427404 SPON1Q9HCB6 807 aa9.8□□□□□ -0.84
FARP1-204ENST00000427404 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
FARP1-204ENST00000427404 HSP90AB1P08238 724 aaKnown RBP9.79□□□□□ -0.84
FARP1-204ENST00000427404 HMGB2P26583 209 aaKnown RBP9.79□□□□□ -0.84
FARP1-204ENST00000427404 PLEKHO1Q53GL0 409 aaPredicted RBP9.79□□□□□ -0.84
FARP1-204ENST00000427404 AEBP1Q8IUX7 1158 aa9.79□□□□□ -0.84
FARP1-204ENST00000427404 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
FARP1-204ENST00000427404 CCNL1Q9UK58 526 aaPredicted RBP9.79□□□□□ -0.84
FARP1-204ENST00000427404 C5P01031 1676 aa9.78□□□□□ -0.84
FARP1-204ENST00000427404 TUBGCP6Q96RT7 1819 aa9.78□□□□□ -0.84
FARP1-204ENST00000427404 SULT6B1Q6IMI4 303 aa9.78□□□□□ -0.84
FARP1-204ENST00000427404 MPRIPQ6WCQ1 1025 aa9.78□□□□□ -0.84
FARP1-204ENST00000427404 PIGBQ92521 554 aa9.78□□□□□ -0.84
FARP1-204ENST00000427404 TAF1LQ8IZX4 1826 aa9.77□□□□□ -0.84
FARP1-204ENST00000427404 KDM6AO15550 1401 aaPredicted RBP9.77□□□□□ -0.85
FARP1-204ENST00000427404 ERVV-2B6SEH9 535 aa9.77□□□□□ -0.85
FARP1-204ENST00000427404 DIAPH1O60610 1272 aaKnown RBP9.77□□□□□ -0.85
FARP1-204ENST00000427404 ZNF530Q6P9A1 599 aaPredicted RBP9.77□□□□□ -0.85
FARP1-204ENST00000427404 DCAF5Q96JK2 942 aa9.77□□□□□ -0.85
FARP1-204ENST00000427404 PDGFDQ9GZP0 370 aaPredicted RBP9.77□□□□□ -0.85
FARP1-204ENST00000427404 MTFR1LQ9H019 292 aa9.77□□□□□ -0.85
FARP1-204ENST00000427404 TMOD3Q9NYL9 352 aa9.77□□□□□ -0.85
FARP1-204ENST00000427404 COL24A1Q17RW2 1714 aa9.76□□□□□ -0.85
FARP1-204ENST00000427404 PTGER2P43116 358 aa9.76□□□□□ -0.85
FARP1-204ENST00000427404 ZNF831Q5JPB2 1677 aa9.76□□□□□ -0.85
FARP1-204ENST00000427404 PNPLA7Q6ZV29 1317 aa9.76□□□□□ -0.85
FARP1-204ENST00000427404 ZBTB7AO95365 584 aa9.75□□□□□ -0.85
FARP1-204ENST00000427404 KCNQ4P56696 695 aa9.75□□□□□ -0.85
FARP1-204ENST00000427404 C1orf141Q5JVX7 400 aa9.75□□□□□ -0.85
FARP1-204ENST00000427404 SLC16A10Q8TF71 515 aa9.75□□□□□ -0.85
FARP1-204ENST00000427404 SGIP1Q9BQI5 828 aa9.75□□□□□ -0.85
FARP1-204ENST00000427404 C4BP0C0L5 1744 aa9.75□□□□□ -0.85
FARP1-204ENST00000427404 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
FARP1-204ENST00000427404 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
FARP1-204ENST00000427404 MRC1P22897 1456 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms