RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
ERCC3-202ENST00000426778 NOL8Q76FK4 1167 aaKnown RBP17.78■□□□□ 0.44
ERCC3-202ENST00000426778 CHMP4BQ9H444 224 aaKnown RBP17.78■□□□□ 0.44
ERCC3-202ENST00000426778 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
ERCC3-202ENST00000426778 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
ERCC3-202ENST00000426778 ANKRD44Q8N8A2 993 aa17.77■□□□□ 0.43
ERCC3-202ENST00000426778 EXOC6BQ9Y2D4 811 aa17.77■□□□□ 0.43
ERCC3-202ENST00000426778 BAG4O95429 457 aaKnown RBP17.76■□□□□ 0.43
ERCC3-202ENST00000426778 USP26Q9BXU7 913 aa17.76■□□□□ 0.43
ERCC3-202ENST00000426778 CIZ1Q9ULV3 898 aaPredicted RBP17.76■□□□□ 0.43
ERCC3-202ENST00000426778 ACEP12821 1306 aa17.76■□□□□ 0.43
ERCC3-202ENST00000426778 ESF1Q9H501 851 aaKnown RBP17.75■□□□□ 0.43
ERCC3-202ENST00000426778 NUTM2GQ5VZR2 741 aa17.75■□□□□ 0.43
ERCC3-202ENST00000426778 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
ERCC3-202ENST00000426778 ATP10DQ9P241 1426 aa17.75■□□□□ 0.43
ERCC3-202ENST00000426778 SLC26A8Q96RN1 970 aa17.75■□□□□ 0.43
ERCC3-202ENST00000426778 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
ERCC3-202ENST00000426778 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
ERCC3-202ENST00000426778 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
ERCC3-202ENST00000426778 RGS12O14924 1447 aa17.74■□□□□ 0.43
ERCC3-202ENST00000426778 CHL1O00533 1208 aa17.74■□□□□ 0.43
ERCC3-202ENST00000426778 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-202ENST00000426778 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-202ENST00000426778 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-202ENST00000426778 RTL1A6NKG5 1358 aa17.74■□□□□ 0.43
ERCC3-202ENST00000426778 CAVIN1Q6NZI2 390 aaKnown RBP17.73■□□□□ 0.43
ERCC3-202ENST00000426778 TTC21BQ7Z4L5 1316 aa17.73■□□□□ 0.43
ERCC3-202ENST00000426778 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.73■□□□□ 0.43
ERCC3-202ENST00000426778 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
ERCC3-202ENST00000426778 TSPYL4Q9UJ04 414 aa17.72■□□□□ 0.43
ERCC3-202ENST00000426778 AATKQ6ZMQ8 1374 aa17.72■□□□□ 0.43
ERCC3-202ENST00000426778 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
ERCC3-202ENST00000426778 ESPNB1AK53 854 aa17.72■□□□□ 0.43
ERCC3-202ENST00000426778 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
ERCC3-202ENST00000426778 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
ERCC3-202ENST00000426778 RABEP1Q15276 862 aa17.71■□□□□ 0.43
ERCC3-202ENST00000426778 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
ERCC3-202ENST00000426778 CLCN1P35523 988 aa17.71■□□□□ 0.43
ERCC3-202ENST00000426778 MAP3K19Q56UN5 1328 aa17.7■□□□□ 0.42
ERCC3-202ENST00000426778 GOLGA6L22H0YM25 854 aa17.7■□□□□ 0.42
ERCC3-202ENST00000426778 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
ERCC3-202ENST00000426778 RPAP2Q8IXW5 612 aaPredicted RBP17.69■□□□□ 0.42
ERCC3-202ENST00000426778 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
ERCC3-202ENST00000426778 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
ERCC3-202ENST00000426778 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
ERCC3-202ENST00000426778 DTNBO60941 627 aa17.68■□□□□ 0.42
ERCC3-202ENST00000426778 NASPP49321 788 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-202ENST00000426778 SKOR2Q2VWA4 1001 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-202ENST00000426778 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
ERCC3-202ENST00000426778 DLC1Q96QB1 1528 aa17.68■□□□□ 0.42
ERCC3-202ENST00000426778 NRXN3Q9Y4C0 1643 aa17.68■□□□□ 0.42
ERCC3-202ENST00000426778 RILPL2Q969X0 211 aa17.68■□□□□ 0.42
ERCC3-202ENST00000426778 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
ERCC3-202ENST00000426778 NEK4P51957 841 aa17.67■□□□□ 0.42
ERCC3-202ENST00000426778 PNMA6EA0A0J9YXQ4 647 aa17.66■□□□□ 0.42
ERCC3-202ENST00000426778 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-202ENST00000426778 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
ERCC3-202ENST00000426778 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
ERCC3-202ENST00000426778 PDE1AP54750 535 aa17.66■□□□□ 0.42
ERCC3-202ENST00000426778 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-202ENST00000426778 CASC1Q6TDU7 716 aa17.66■□□□□ 0.42
ERCC3-202ENST00000426778 ZDHHC9Q9Y397 364 aa17.66■□□□□ 0.42
ERCC3-202ENST00000426778 LTKP29376 864 aa17.65■□□□□ 0.42
ERCC3-202ENST00000426778 PALD1Q9ULE6 856 aa17.65■□□□□ 0.42
ERCC3-202ENST00000426778 LMBRD1Q9NUN5 540 aa17.65■□□□□ 0.42
ERCC3-202ENST00000426778 ST18O60284 1047 aa17.65■□□□□ 0.42
ERCC3-202ENST00000426778 KLHL40Q2TBA0 621 aa17.65■□□□□ 0.42
ERCC3-202ENST00000426778 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
ERCC3-202ENST00000426778 AMPHP49418 695 aa17.64■□□□□ 0.41
ERCC3-202ENST00000426778 UPF3BQ9BZI7 483 aaKnown RBP17.64■□□□□ 0.41
ERCC3-202ENST00000426778 ERC2O15083 957 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 ZSCAN23Q3MJ62 389 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 UNC5CLQ8IV45 518 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 EYA1Q99502 592 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 GPT2Q8TD30 523 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 ANO2Q9NQ90 1003 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 PTPRCP08575 1304 aa17.63■□□□□ 0.41
ERCC3-202ENST00000426778 NGDNQ8NEJ9 315 aaKnown RBP17.62■□□□□ 0.41
ERCC3-202ENST00000426778 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
ERCC3-202ENST00000426778 C3P01024 1663 aa17.62■□□□□ 0.41
ERCC3-202ENST00000426778 CRB1P82279 1406 aa17.62■□□□□ 0.41
ERCC3-202ENST00000426778 MON2Q7Z3U7 1717 aa17.62■□□□□ 0.41
ERCC3-202ENST00000426778 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
ERCC3-202ENST00000426778 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 PRIM1P49642 420 aaKnown RBP17.61■□□□□ 0.41
ERCC3-202ENST00000426778 RBSNQ9H1K0 784 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 HMMRO75330 724 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 REC8O95072 547 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 NUCB2P80303 420 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 IL25Q9H293 177 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 SPATA31D1Q6ZQQ2 1576 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 GDPD2Q9HCC8 539 aa17.61■□□□□ 0.41
ERCC3-202ENST00000426778 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
ERCC3-202ENST00000426778 GNAI2P04899 355 aa17.6■□□□□ 0.41
ERCC3-202ENST00000426778 CYP2E1P05181 493 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-202ENST00000426778 FLIIQ13045 1269 aa17.6■□□□□ 0.41
ERCC3-202ENST00000426778 RNF214Q8ND24 703 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms