RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
SGCE-203ENST00000425444 TUBGCP6Q96RT7 1819 aa17.82■□□□□ 0.44
SGCE-203ENST00000425444 CAPN15O75808 1086 aa17.82■□□□□ 0.44
SGCE-203ENST00000425444 IL2RBP14784 551 aa17.82■□□□□ 0.44
SGCE-203ENST00000425444 APLP1P51693 650 aa17.82■□□□□ 0.44
SGCE-203ENST00000425444 TESK2Q96S53 571 aa17.82■□□□□ 0.44
SGCE-203ENST00000425444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.447e-6■■□□□ 11.5
SGCE-203ENST00000425444 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
SGCE-203ENST00000425444 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
SGCE-203ENST00000425444 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
SGCE-203ENST00000425444 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
SGCE-203ENST00000425444 TMF1P82094 1093 aa17.79■□□□□ 0.44
SGCE-203ENST00000425444 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
SGCE-203ENST00000425444 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
SGCE-203ENST00000425444 KIF3CO14782 793 aa17.78■□□□□ 0.44
SGCE-203ENST00000425444 DNAJC5GQ8N7S2 189 aa17.78■□□□□ 0.44
SGCE-203ENST00000425444 SYTL4Q96C24 671 aaPredicted RBP17.78■□□□□ 0.44
SGCE-203ENST00000425444 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
SGCE-203ENST00000425444 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
SGCE-203ENST00000425444 COL23A1Q86Y22 540 aaPredicted RBP17.77■□□□□ 0.44
SGCE-203ENST00000425444 ERBB3P21860 1342 aa17.76■□□□□ 0.43
SGCE-203ENST00000425444 NME9Q86XW9 330 aa17.76■□□□□ 0.43
SGCE-203ENST00000425444 DDX54Q8TDD1 881 aaKnown RBP17.76■□□□□ 0.43
SGCE-203ENST00000425444 NFAT5O94916 1531 aa17.76■□□□□ 0.43
SGCE-203ENST00000425444 COL13A1Q5TAT6 717 aaPredicted RBP17.75■□□□□ 0.43
SGCE-203ENST00000425444 CCNL1Q9UK58 526 aaPredicted RBP17.74■□□□□ 0.43
SGCE-203ENST00000425444 WWC3Q9ULE0 1092 aa17.74■□□□□ 0.43
SGCE-203ENST00000425444 USP31Q70CQ4 1352 aa17.74■□□□□ 0.43
SGCE-203ENST00000425444 PRIM1P49642 420 aaKnown RBP17.73■□□□□ 0.43
SGCE-203ENST00000425444 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
SGCE-203ENST00000425444 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
SGCE-203ENST00000425444 ANKRD36BQ8N2N9 1353 aa17.71■□□□□ 0.43
SGCE-203ENST00000425444 ANKRD24Q8TF21 1146 aa17.71■□□□□ 0.43
SGCE-203ENST00000425444 TOMM70O94826 608 aa17.7■□□□□ 0.42
SGCE-203ENST00000425444 TNS4Q8IZW8 715 aa17.69■□□□□ 0.42
SGCE-203ENST00000425444 LY75O60449 1722 aa17.69■□□□□ 0.42
SGCE-203ENST00000425444 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
SGCE-203ENST00000425444 PRELPP51888 382 aa17.68■□□□□ 0.42
SGCE-203ENST00000425444 COG3Q96JB2 828 aa17.67■□□□□ 0.42
SGCE-203ENST00000425444 LTN1O94822 1766 aa17.66■□□□□ 0.42
SGCE-203ENST00000425444 NSD2O96028 1365 aa17.66■□□□□ 0.42
SGCE-203ENST00000425444 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
SGCE-203ENST00000425444 KLRG1Q96E93 195 aa17.65■□□□□ 0.42
SGCE-203ENST00000425444 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
SGCE-203ENST00000425444 DOT1LQ8TEK3 1739 aa17.64■□□□□ 0.41
SGCE-203ENST00000425444 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.41
SGCE-203ENST00000425444 HTRA3P83110 453 aa17.64■□□□□ 0.41
SGCE-203ENST00000425444 WDR90Q96KV7 1748 aa17.63■□□□□ 0.41
SGCE-203ENST00000425444 JMYQ8N9B5 988 aa17.62■□□□□ 0.41
SGCE-203ENST00000425444 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
SGCE-203ENST00000425444 GGNBP2Q9H3C7 697 aa17.61■□□□□ 0.41
SGCE-203ENST00000425444 NMRK2Q9NPI5 230 aa17.61■□□□□ 0.41
SGCE-203ENST00000425444 HSPA5P11021 654 aaKnown RBP17.6■□□□□ 0.41
SGCE-203ENST00000425444 NSD3Q9BZ95 1437 aa17.59■□□□□ 0.41
SGCE-203ENST00000425444 ZCRB1Q8TBF4 217 aaKnown RBP17.59■□□□□ 0.41
SGCE-203ENST00000425444 RBM46Q8TBY0 533 aaKnown RBP17.59■□□□□ 0.41
SGCE-203ENST00000425444 KIF20BQ96Q89 1820 aa17.58■□□□□ 0.41
SGCE-203ENST00000425444 C5P01031 1676 aa17.58■□□□□ 0.41
SGCE-203ENST00000425444 FYB1O15117 783 aa17.58■□□□□ 0.4
SGCE-203ENST00000425444 HMGB2P26583 209 aaKnown RBP17.58■□□□□ 0.4
SGCE-203ENST00000425444 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.4
SGCE-203ENST00000425444 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
SGCE-203ENST00000425444 AMPHP49418 695 aa17.57■□□□□ 0.4
SGCE-203ENST00000425444 IP6K1Q92551 441 aa17.57■□□□□ 0.4
SGCE-203ENST00000425444 PHF14O94880 888 aa17.56■□□□□ 0.4
SGCE-203ENST00000425444 AK7Q96M32 723 aa17.56■□□□□ 0.4
SGCE-203ENST00000425444 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
SGCE-203ENST00000425444 FBLN1P23142 703 aa17.55■□□□□ 0.4
SGCE-203ENST00000425444 RTL1A6NKG5 1358 aa17.54■□□□□ 0.4
SGCE-203ENST00000425444 HOXC9P31274 260 aa17.54■□□□□ 0.4
SGCE-203ENST00000425444 RRS1Q15050 365 aaKnown RBP17.54■□□□□ 0.4
SGCE-203ENST00000425444 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
SGCE-203ENST00000425444 AMIGO3Q86WK7 504 aa17.54■□□□□ 0.4
SGCE-203ENST00000425444 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
SGCE-203ENST00000425444 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
SGCE-203ENST00000425444 FAM208AQ9UK61 1670 aaKnown RBP17.53■□□□□ 0.4
SGCE-203ENST00000425444 FSTL1Q12841 308 aa17.53■□□□□ 0.4
SGCE-203ENST00000425444 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
SGCE-203ENST00000425444 BCS1LQ9Y276 419 aa17.53■□□□□ 0.4
SGCE-203ENST00000425444 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
SGCE-203ENST00000425444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.52■□□□□ 0.4
SGCE-203ENST00000425444 MEGF6O75095 1541 aa17.52■□□□□ 0.39
SGCE-203ENST00000425444 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
SGCE-203ENST00000425444 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
SGCE-203ENST00000425444 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
SGCE-203ENST00000425444 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
SGCE-203ENST00000425444 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
SGCE-203ENST00000425444 A0A0G2JLW4 131 aa17.48■□□□□ 0.39
SGCE-203ENST00000425444 FLT4P35916 1363 aa17.48■□□□□ 0.39
SGCE-203ENST00000425444 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
SGCE-203ENST00000425444 TOGARAM1Q9Y4F4 1720 aa17.47■□□□□ 0.39
SGCE-203ENST00000425444 MMP10P09238 476 aa17.47■□□□□ 0.39
SGCE-203ENST00000425444 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
SGCE-203ENST00000425444 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
SGCE-203ENST00000425444 SSFA2P28290 1259 aa17.47■□□□□ 0.39
SGCE-203ENST00000425444 C9orf131Q5VYM1 1079 aa17.47■□□□□ 0.39
SGCE-203ENST00000425444 RGPD2P0DJD1 1756 aa17.47■□□□□ 0.39
SGCE-203ENST00000425444 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.39
SGCE-203ENST00000425444 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
SGCE-203ENST00000425444 FCHSD2O94868 740 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms