RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 RBM6P78332 1123 aaKnown RBP21.88■■□□□ 1.09
SAPCD1-209ENST00000425424 PLEKHF1Q96S99 279 aa21.88■■□□□ 1.09
SAPCD1-209ENST00000425424 TNS2Q63HR2 1409 aa21.88■■□□□ 1.09
SAPCD1-209ENST00000425424 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
SAPCD1-209ENST00000425424 USP35Q9P2H5 1018 aa21.87■■□□□ 1.09
SAPCD1-209ENST00000425424 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
SAPCD1-209ENST00000425424 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
SAPCD1-209ENST00000425424 AMOTQ4VCS5 1084 aa21.85■■□□□ 1.09
SAPCD1-209ENST00000425424 RUNDC1Q96C34 613 aa21.84■■□□□ 1.09
SAPCD1-209ENST00000425424 NEFMP07197 916 aa21.83■■□□□ 1.09
SAPCD1-209ENST00000425424 FAM98CQ17RN3 349 aaKnown RBP21.83■■□□□ 1.09
SAPCD1-209ENST00000425424 FAM9BQ8IZU0 186 aa21.83■■□□□ 1.09
SAPCD1-209ENST00000425424 MAPK8IP3Q9UPT6 1336 aa21.82■■□□□ 1.08
SAPCD1-209ENST00000425424 RXRBP28702 533 aa21.82■■□□□ 1.08
SAPCD1-209ENST00000425424 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
SAPCD1-209ENST00000425424 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
SAPCD1-209ENST00000425424 PLEKHO1Q53GL0 409 aaPredicted RBP21.81■■□□□ 1.08
SAPCD1-209ENST00000425424 POTEAQ6S8J7 498 aa21.81■■□□□ 1.08
SAPCD1-209ENST00000425424 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
SAPCD1-209ENST00000425424 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
SAPCD1-209ENST00000425424 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
SAPCD1-209ENST00000425424 ZCRB1Q8TBF4 217 aaKnown RBP21.79■■□□□ 1.08
SAPCD1-209ENST00000425424 DDB1Q16531 1140 aa21.78■■□□□ 1.08
SAPCD1-209ENST00000425424 PHACTR3Q96KR7 559 aa21.78■■□□□ 1.08
SAPCD1-209ENST00000425424 RGS12O14924 1447 aa21.78■■□□□ 1.08
SAPCD1-209ENST00000425424 ADAMTS7Q9UKP4 1686 aa21.78■■□□□ 1.08
SAPCD1-209ENST00000425424 EXOC5O00471 708 aa21.77■■□□□ 1.08
SAPCD1-209ENST00000425424 NGEFQ8N5V2 710 aa21.77■■□□□ 1.08
SAPCD1-209ENST00000425424 BCL9O00512 1426 aa21.76■■□□□ 1.07
SAPCD1-209ENST00000425424 MTHFSDQ2M296 383 aaKnown RBP21.76■■□□□ 1.07
SAPCD1-209ENST00000425424 CCDC146Q8IYE0 955 aa21.76■■□□□ 1.07
SAPCD1-209ENST00000425424 SEPT12Q8IYM1 358 aa21.76■■□□□ 1.07
SAPCD1-209ENST00000425424 NFE2L2Q16236 605 aa21.75■■□□□ 1.07
SAPCD1-209ENST00000425424 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
SAPCD1-209ENST00000425424 IFNL2Q8IZJ0 200 aa21.74■■□□□ 1.07
SAPCD1-209ENST00000425424 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
SAPCD1-209ENST00000425424 HTATSF1O43719 755 aaKnown RBP21.73■■□□□ 1.07
SAPCD1-209ENST00000425424 HSP90AB1P08238 724 aaKnown RBP21.73■■□□□ 1.07
SAPCD1-209ENST00000425424 PHKG2P15735 406 aa21.73■■□□□ 1.07
SAPCD1-209ENST00000425424 TMPOP42166 694 aaKnown RBP21.73■■□□□ 1.07
SAPCD1-209ENST00000425424 NKX1-1Q15270 411 aaPredicted RBP21.73■■□□□ 1.07
SAPCD1-209ENST00000425424 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
SAPCD1-209ENST00000425424 BRWD3Q6RI45 1802 aa21.73■■□□□ 1.07
SAPCD1-209ENST00000425424 DLG5Q8TDM6 1919 aa21.72■■□□□ 1.07
SAPCD1-209ENST00000425424 CYP27B1O15528 508 aa21.72■■□□□ 1.07
SAPCD1-209ENST00000425424 C1orf141Q5JVX7 400 aa21.72■■□□□ 1.07
SAPCD1-209ENST00000425424 APAF1O14727 1248 aa21.71■■□□□ 1.07
SAPCD1-209ENST00000425424 LMOD3Q0VAK6 560 aa21.71■■□□□ 1.07
SAPCD1-209ENST00000425424 A0A0G2JS52 829 aa21.7■■□□□ 1.06
SAPCD1-209ENST00000425424 MYT1Q01538 1121 aa21.7■■□□□ 1.06
SAPCD1-209ENST00000425424 CCDC27Q2M243 656 aa21.7■■□□□ 1.06
SAPCD1-209ENST00000425424 MRC1P22897 1456 aa21.7■■□□□ 1.06
SAPCD1-209ENST00000425424 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
SAPCD1-209ENST00000425424 GNAT3A8MTJ3 354 aa21.69■■□□□ 1.06
SAPCD1-209ENST00000425424 PDE3BQ13370 1112 aa21.69■■□□□ 1.06
SAPCD1-209ENST00000425424 MARCH10Q8NA82 808 aaPredicted RBP21.68■■□□□ 1.06
SAPCD1-209ENST00000425424 DCAF5Q96JK2 942 aa21.68■■□□□ 1.06
SAPCD1-209ENST00000425424 CEMIPQ8WUJ3 1361 aa21.68■■□□□ 1.06
SAPCD1-209ENST00000425424 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
SAPCD1-209ENST00000425424 TOGARAM1Q9Y4F4 1720 aa21.67■■□□□ 1.06
SAPCD1-209ENST00000425424 RIPK4P57078 832 aa21.67■■□□□ 1.06
SAPCD1-209ENST00000425424 KRT27Q7Z3Y8 459 aa21.67■■□□□ 1.06
SAPCD1-209ENST00000425424 VIRMAQ69YN4 1812 aaKnown RBP21.66■■□□□ 1.06
SAPCD1-209ENST00000425424 DDX54Q8TDD1 881 aaKnown RBP21.66■■□□□ 1.06
SAPCD1-209ENST00000425424 RTF1Q92541 710 aaKnown RBP21.65■■□□□ 1.06
SAPCD1-209ENST00000425424 DOT1LQ8TEK3 1739 aa21.65■■□□□ 1.06
SAPCD1-209ENST00000425424 TRIM35Q9UPQ4 493 aa21.64■■□□□ 1.05
SAPCD1-209ENST00000425424 NHSQ6T4R5 1651 aa21.63■■□□□ 1.05
SAPCD1-209ENST00000425424 SIPA1L3O60292 1781 aaPredicted RBP21.63■■□□□ 1.05
SAPCD1-209ENST00000425424 ERVV-2B6SEH9 535 aa21.62■■□□□ 1.05
SAPCD1-209ENST00000425424 RRP7AQ9Y3A4 280 aaKnown RBP21.62■■□□□ 1.05
SAPCD1-209ENST00000425424 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
SAPCD1-209ENST00000425424 ZNF521Q96K83 1311 aa21.6■■□□□ 1.05
SAPCD1-209ENST00000425424 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
SAPCD1-209ENST00000425424 MPRIPQ6WCQ1 1025 aa21.6■■□□□ 1.05
SAPCD1-209ENST00000425424 FAM196AQ6ZSG2 479 aa21.6■■□□□ 1.05
SAPCD1-209ENST00000425424 WWC1Q8IX03 1113 aa21.6■■□□□ 1.05
SAPCD1-209ENST00000425424 IL17REQ8NFR9 667 aa21.6■■□□□ 1.05
SAPCD1-209ENST00000425424 SBF2Q86WG5 1849 aa21.59■■□□□ 1.05
SAPCD1-209ENST00000425424 NEUROD2Q15784 382 aa21.59■■□□□ 1.05
SAPCD1-209ENST00000425424 ITGB4P16144 1822 aa21.58■■□□□ 1.05
SAPCD1-209ENST00000425424 HNRNPUQ00839 825 aaKnown RBP eCLIP21.58■■□□□ 1.05
SAPCD1-209ENST00000425424 PAPPAQ13219 1627 aa21.58■■□□□ 1.04
SAPCD1-209ENST00000425424 IL16Q14005 1332 aa21.57■■□□□ 1.04
SAPCD1-209ENST00000425424 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
SAPCD1-209ENST00000425424 MCM10Q7L590 875 aa21.57■■□□□ 1.04
SAPCD1-209ENST00000425424 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
SAPCD1-209ENST00000425424 LGR6Q9HBX8 967 aa21.57■■□□□ 1.04
SAPCD1-209ENST00000425424 SLC52A2Q9HAB3 445 aa21.56■■□□□ 1.04
SAPCD1-209ENST00000425424 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
SAPCD1-209ENST00000425424 TEFQ10587 303 aa21.55■■□□□ 1.04
SAPCD1-209ENST00000425424 DCTN1Q14203 1278 aa21.54■■□□□ 1.04
SAPCD1-209ENST00000425424 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
SAPCD1-209ENST00000425424 CABP4P57796 275 aa21.53■■□□□ 1.04
SAPCD1-209ENST00000425424 IFT57Q9NWB7 429 aa21.52■■□□□ 1.04
SAPCD1-209ENST00000425424 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
SAPCD1-209ENST00000425424 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
SAPCD1-209ENST00000425424 FAM182BQ5T319 152 aa21.51■■□□□ 1.03
SAPCD1-209ENST00000425424 THUMPD2Q9BTF0 503 aaKnown RBP21.51■■□□□ 1.03
SAPCD1-209ENST00000425424 BCL11BQ9C0K0 894 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms