RNA–Protein interactions for RNA: ENST00000425039.3

PMS2P2-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 2, humanhuman

BASIC

Gene PMS2P2, Length 1,128 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P2-201ENST00000425039 RGPD2P0DJD1 1756 aa23.63■■□□□ 1.37
PMS2P2-201ENST00000425039 EDC4Q6P2E9 1401 aaKnown RBP23.62■■□□□ 1.37
PMS2P2-201ENST00000425039 IP6K1Q92551 441 aa23.61■■□□□ 1.37
PMS2P2-201ENST00000425039 HDGFL2Q7Z4V5 671 aaPredicted RBP23.6■■□□□ 1.37
PMS2P2-201ENST00000425039 CCNL1Q9UK58 526 aaPredicted RBP23.6■■□□□ 1.37
PMS2P2-201ENST00000425039 C5P01031 1676 aa23.6■■□□□ 1.37
PMS2P2-201ENST00000425039 MSH5O43196 834 aa23.59■■□□□ 1.37
PMS2P2-201ENST00000425039 COL23A1Q86Y22 540 aaPredicted RBP23.58■■□□□ 1.37
PMS2P2-201ENST00000425039 TMC1Q8TDI8 760 aa23.58■■□□□ 1.37
PMS2P2-201ENST00000425039 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
PMS2P2-201ENST00000425039 TAF1LQ8IZX4 1826 aa23.56■■□□□ 1.36
PMS2P2-201ENST00000425039 GPBP1L1Q9HC44 474 aaPredicted RBP23.56■■□□□ 1.36
PMS2P2-201ENST00000425039 A0A1W2PP64 1363 aa23.55■■□□□ 1.36
PMS2P2-201ENST00000425039 MSL1Q68DK7 614 aa23.55■■□□□ 1.36
PMS2P2-201ENST00000425039 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
PMS2P2-201ENST00000425039 MEGF6O75095 1541 aa23.54■■□□□ 1.36
PMS2P2-201ENST00000425039 ADCY9O60503 1353 aa23.54■■□□□ 1.36
PMS2P2-201ENST00000425039 USP47Q96K76 1375 aa23.54■■□□□ 1.36
PMS2P2-201ENST00000425039 ZCRB1Q8TBF4 217 aaKnown RBP23.54■■□□□ 1.36
PMS2P2-201ENST00000425039 HSPA6P17066 643 aa23.53■■□□□ 1.36
PMS2P2-201ENST00000425039 TERF2IPQ9NYB0 399 aa23.53■■□□□ 1.36
PMS2P2-201ENST00000425039 CD2APQ9Y5K6 639 aa23.53■■□□□ 1.36
PMS2P2-201ENST00000425039 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
PMS2P2-201ENST00000425039 HOXC9P31274 260 aa23.5■■□□□ 1.35
PMS2P2-201ENST00000425039 MAP3K19Q56UN5 1328 aa23.49■■□□□ 1.35
PMS2P2-201ENST00000425039 ZNF526Q8TF50 670 aaPredicted RBP23.48■■□□□ 1.35
PMS2P2-201ENST00000425039 AMPHP49418 695 aa23.47■■□□□ 1.35
PMS2P2-201ENST00000425039 FLAD1Q8NFF5 587 aa23.47■■□□□ 1.35
PMS2P2-201ENST00000425039 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
PMS2P2-201ENST00000425039 C4BP0C0L5 1744 aa23.45■■□□□ 1.34
PMS2P2-201ENST00000425039 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
PMS2P2-201ENST00000425039 COG3Q96JB2 828 aa23.45■■□□□ 1.34
PMS2P2-201ENST00000425039 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
PMS2P2-201ENST00000425039 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.34
PMS2P2-201ENST00000425039 CGNL1Q0VF96 1302 aa23.44■■□□□ 1.34
PMS2P2-201ENST00000425039 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
PMS2P2-201ENST00000425039 ITGB4P16144 1822 aa23.44■■□□□ 1.34
PMS2P2-201ENST00000425039 RTL1A6NKG5 1358 aa23.43■■□□□ 1.34
PMS2P2-201ENST00000425039 FBLN1P23142 703 aa23.43■■□□□ 1.34
PMS2P2-201ENST00000425039 PUS7Q96PZ0 661 aaKnown RBP23.43■■□□□ 1.34
PMS2P2-201ENST00000425039 PALLDQ8WX93 1383 aa23.41■■□□□ 1.34
PMS2P2-201ENST00000425039 NBPF6Q5VWK0 638 aa23.41■■□□□ 1.34
PMS2P2-201ENST00000425039 NBPF4Q96M43 638 aa23.41■■□□□ 1.34
PMS2P2-201ENST00000425039 IGSF1Q8N6C5 1336 aa23.4■■□□□ 1.34
PMS2P2-201ENST00000425039 RAPGEF4Q8WZA2 1011 aa23.4■■□□□ 1.34
PMS2P2-201ENST00000425039 USHBP1Q8N6Y0 703 aa23.39■■□□□ 1.33
PMS2P2-201ENST00000425039 SMG6Q86US8 1419 aaKnown RBP23.38■■□□□ 1.33
PMS2P2-201ENST00000425039 CICQ96RK0 1608 aaPredicted RBP23.37■■□□□ 1.33
PMS2P2-201ENST00000425039 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
PMS2P2-201ENST00000425039 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
PMS2P2-201ENST00000425039 TATP17735 454 aaPredicted RBP23.37■■□□□ 1.33
PMS2P2-201ENST00000425039 AK7Q96M32 723 aa23.37■■□□□ 1.33
PMS2P2-201ENST00000425039 WWC3Q9ULE0 1092 aa23.37■■□□□ 1.33
PMS2P2-201ENST00000425039 KIF3CO14782 793 aa23.36■■□□□ 1.33
PMS2P2-201ENST00000425039 MPRIPQ6WCQ1 1025 aa23.36■■□□□ 1.33
PMS2P2-201ENST00000425039 NSD3Q9BZ95 1437 aa23.35■■□□□ 1.33
PMS2P2-201ENST00000425039 RRS1Q15050 365 aaKnown RBP23.35■■□□□ 1.33
PMS2P2-201ENST00000425039 AMIGO3Q86WK7 504 aa23.35■■□□□ 1.33
PMS2P2-201ENST00000425039 MAP2P11137 1827 aaKnown RBP23.34■■□□□ 1.33
PMS2P2-201ENST00000425039 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.33
PMS2P2-201ENST00000425039 PHF14O94880 888 aa23.33■■□□□ 1.33
PMS2P2-201ENST00000425039 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
PMS2P2-201ENST00000425039 KIF13BQ9NQT8 1826 aa23.32■■□□□ 1.32
PMS2P2-201ENST00000425039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.31■■□□□ 1.32
PMS2P2-201ENST00000425039 CYP27B1O15528 508 aa23.3■■□□□ 1.32
PMS2P2-201ENST00000425039 SSFA2P28290 1259 aa23.3■■□□□ 1.32
PMS2P2-201ENST00000425039 APLP1P51693 650 aa23.3■■□□□ 1.32
PMS2P2-201ENST00000425039 SMIM5Q71RC9 77 aa23.3■■□□□ 1.32
PMS2P2-201ENST00000425039 KIF20BQ96Q89 1820 aa23.3■■□□□ 1.32
PMS2P2-201ENST00000425039 KIAA1551Q9HCM1 1747 aa23.3■■□□□ 1.32
PMS2P2-201ENST00000425039 N4BP2Q86UW6 1770 aaPredicted RBP23.29■■□□□ 1.32
PMS2P2-201ENST00000425039 INSRP06213 1382 aa23.28■■□□□ 1.32
PMS2P2-201ENST00000425039 TESK2Q96S53 571 aa23.28■■□□□ 1.32
PMS2P2-201ENST00000425039 FYB1O15117 783 aa23.26■■□□□ 1.31
PMS2P2-201ENST00000425039 HSP90AB2PQ58FF8 381 aa23.26■■□□□ 1.31
PMS2P2-201ENST00000425039 PIGBQ92521 554 aa23.26■■□□□ 1.31
PMS2P2-201ENST00000425039 GGNBP2Q9H3C7 697 aa23.26■■□□□ 1.31
PMS2P2-201ENST00000425039 FLT4P35916 1363 aa23.26■■□□□ 1.31
PMS2P2-201ENST00000425039 WDR90Q96KV7 1748 aa23.25■■□□□ 1.31
PMS2P2-201ENST00000425039 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
PMS2P2-201ENST00000425039 TOMM70O94826 608 aa23.24■■□□□ 1.31
PMS2P2-201ENST00000425039 DNAJC5GQ8N7S2 189 aa23.24■■□□□ 1.31
PMS2P2-201ENST00000425039 LINC00116Q8NCU8 138 aa23.24■■□□□ 1.31
PMS2P2-201ENST00000425039 KIF24Q5T7B8 1368 aa23.24■■□□□ 1.31
PMS2P2-201ENST00000425039 LOC102724428A0A0B4J2F2 783 aa23.23■■□□□ 1.31
PMS2P2-201ENST00000425039 SIK1P57059 783 aa23.23■■□□□ 1.31
PMS2P2-201ENST00000425039 ST20-MTHFSA0A0A6YYL1 179 aa23.22■■□□□ 1.31
PMS2P2-201ENST00000425039 BRCA1P38398 1863 aaKnown RBP23.22■■□□□ 1.31
PMS2P2-201ENST00000425039 SLC24A1O60721 1099 aa23.21■■□□□ 1.31
PMS2P2-201ENST00000425039 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
PMS2P2-201ENST00000425039 GNPATO15228 680 aa23.2■■□□□ 1.3
PMS2P2-201ENST00000425039 NCAPD2Q15021 1401 aa23.19■■□□□ 1.3
PMS2P2-201ENST00000425039 MMP10P09238 476 aa23.19■■□□□ 1.3
PMS2P2-201ENST00000425039 TGFB2P61812 414 aa23.18■■□□□ 1.3
PMS2P2-201ENST00000425039 BCS1LQ9Y276 419 aa23.18■■□□□ 1.3
PMS2P2-201ENST00000425039 ARFGEF1Q9Y6D6 1849 aa23.17■■□□□ 1.3
PMS2P2-201ENST00000425039 TONSLQ96HA7 1378 aa23.17■■□□□ 1.3
PMS2P2-201ENST00000425039 ANKRD26Q9UPS8 1709 aa23.17■■□□□ 1.3
PMS2P2-201ENST00000425039 ITPK1Q13572 414 aa23.17■■□□□ 1.3
PMS2P2-201ENST00000425039 SPG7Q9UQ90 795 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms