RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 BCL11BQ9C0K0 894 aaPredicted RBP16.44■□□□□ 0.22
SREBF2-202ENST00000424354 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
SREBF2-202ENST00000424354 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
SREBF2-202ENST00000424354 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
SREBF2-202ENST00000424354 WASHC4Q2M389 1173 aa16.43■□□□□ 0.22
SREBF2-202ENST00000424354 ERC1Q8IUD2 1116 aa16.43■□□□□ 0.22
SREBF2-202ENST00000424354 REREQ9P2R6 1566 aa16.43■□□□□ 0.22
SREBF2-202ENST00000424354 ZSCAN30Q86W11 494 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 TNMDQ9H2S6 317 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
SREBF2-202ENST00000424354 ARHGAP31Q2M1Z3 1444 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 TAF3Q5VWG9 929 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 RIC3Q7Z5B4 369 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 NEUROD6Q96NK8 337 aa16.42■□□□□ 0.22
SREBF2-202ENST00000424354 ERLIN1O75477 346 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 EPS15P42566 896 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 KRT85P78386 507 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 CT47A1Q5JQC4 288 aaPredicted RBP16.41■□□□□ 0.22
SREBF2-202ENST00000424354 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 EIF3JO75822 258 aaKnown RBP16.41■□□□□ 0.22
SREBF2-202ENST00000424354 STK38Q15208 465 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 CCDC184Q52MB2 194 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 NOB1Q9ULX3 412 aaKnown RBP16.41■□□□□ 0.22
SREBF2-202ENST00000424354 CDC42BPBQ9Y5S2 1711 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 TOM1O60784 492 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 GNAI2P04899 355 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
SREBF2-202ENST00000424354 CYP46A1Q9Y6A2 500 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
SREBF2-202ENST00000424354 BCAR3O75815 825 aa16.41■□□□□ 0.22
SREBF2-202ENST00000424354 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
SREBF2-202ENST00000424354 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
SREBF2-202ENST00000424354 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
SREBF2-202ENST00000424354 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
SREBF2-202ENST00000424354 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
SREBF2-202ENST00000424354 PZPP20742 1482 aa16.4■□□□□ 0.22
SREBF2-202ENST00000424354 DACH1Q9UI36 760 aa16.4■□□□□ 0.22
SREBF2-202ENST00000424354 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
SREBF2-202ENST00000424354 TSPYL1Q9H0U9 437 aa16.4■□□□□ 0.22
SREBF2-202ENST00000424354 TTLL5Q6EMB2 1281 aa16.39■□□□□ 0.21
SREBF2-202ENST00000424354 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
SREBF2-202ENST00000424354 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
SREBF2-202ENST00000424354 MAGEC2Q9UBF1 373 aaPredicted RBP16.39■□□□□ 0.21
SREBF2-202ENST00000424354 GCC2Q8IWJ2 1684 aa16.39■□□□□ 0.21
SREBF2-202ENST00000424354 CBFA2T2O43439 604 aa16.39■□□□□ 0.21
SREBF2-202ENST00000424354 HMGB2P26583 209 aaKnown RBP16.39■□□□□ 0.21
SREBF2-202ENST00000424354 SERPINC1P01008 464 aa16.38■□□□□ 0.21
SREBF2-202ENST00000424354 CHD1LQ86WJ1 897 aa16.38■□□□□ 0.21
SREBF2-202ENST00000424354 INO80Q9ULG1 1556 aaPredicted RBP16.38■□□□□ 0.21
SREBF2-202ENST00000424354 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
SREBF2-202ENST00000424354 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
SREBF2-202ENST00000424354 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
SREBF2-202ENST00000424354 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
SREBF2-202ENST00000424354 TXLNAP40222 546 aa16.37■□□□□ 0.21
SREBF2-202ENST00000424354 SRCIN1Q9C0H9 1055 aa16.37■□□□□ 0.21
SREBF2-202ENST00000424354 CCT4P50991 539 aaKnown RBP16.37■□□□□ 0.21
SREBF2-202ENST00000424354 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
SREBF2-202ENST00000424354 DIP2CQ9Y2E4 1556 aa16.37■□□□□ 0.21
SREBF2-202ENST00000424354 KIAA0754O94854 1291 aa16.37■□□□□ 0.21
SREBF2-202ENST00000424354 CCDC43Q96MW1 224 aaKnown RBP16.37■□□□□ 0.21
SREBF2-202ENST00000424354 ZNHIT6Q9NWK9 470 aaKnown RBP16.37■□□□□ 0.21
SREBF2-202ENST00000424354 MSH6P52701 1360 aa16.37■□□□□ 0.21
SREBF2-202ENST00000424354 CROCC2H7BZ55 1655 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 CEBPAP49715 358 aaPredicted RBP16.36■□□□□ 0.21
SREBF2-202ENST00000424354 HSP90AB2PQ58FF8 381 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 ZSCAN31Q96LW9 406 aaPredicted RBP16.36■□□□□ 0.21
SREBF2-202ENST00000424354 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 C1orf115Q9H7X2 142 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 PPFIBP1Q86W92 1011 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 RAD21O60216 631 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 TXLNBQ8N3L3 684 aa16.36■□□□□ 0.21
SREBF2-202ENST00000424354 USP8P40818 1118 aa16.35■□□□□ 0.21
SREBF2-202ENST00000424354 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
SREBF2-202ENST00000424354 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
SREBF2-202ENST00000424354 GOLGA6L10A6NI86 522 aa16.35■□□□□ 0.21
SREBF2-202ENST00000424354 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
SREBF2-202ENST00000424354 A2ML1A8K2U0 1454 aa16.34■□□□□ 0.21
SREBF2-202ENST00000424354 KIF2AO00139 706 aaPredicted RBP16.34■□□□□ 0.21
SREBF2-202ENST00000424354 ERLIN2O94905 339 aa16.34■□□□□ 0.21
SREBF2-202ENST00000424354 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
SREBF2-202ENST00000424354 LUC7LQ9NQ29 371 aaKnown RBP16.34■□□□□ 0.21
SREBF2-202ENST00000424354 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
SREBF2-202ENST00000424354 IDI1Q13907 227 aa16.34■□□□□ 0.21
SREBF2-202ENST00000424354 CEP57L1Q8IYX8 460 aa16.34■□□□□ 0.21
SREBF2-202ENST00000424354 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.21
SREBF2-202ENST00000424354 LARP1BQ659C4 914 aaKnown RBP16.33■□□□□ 0.2
SREBF2-202ENST00000424354 ZNF428Q96B54 188 aa16.33■□□□□ 0.2
SREBF2-202ENST00000424354 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
SREBF2-202ENST00000424354 ME1P48163 572 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
SREBF2-202ENST00000424354 LMTK2Q8IWU2 1503 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms