RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 KIF24Q5T7B8 1368 aa21.01■□□□□ 0.95
USB1-202ENST00000423271 DOT1LQ8TEK3 1739 aa21■□□□□ 0.95
USB1-202ENST00000423271 CASZ1Q86V15 1759 aa21■□□□□ 0.95
USB1-202ENST00000423271 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
USB1-202ENST00000423271 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
USB1-202ENST00000423271 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
USB1-202ENST00000423271 PDGFDQ9GZP0 370 aaPredicted RBP20.97■□□□□ 0.95
USB1-202ENST00000423271 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
USB1-202ENST00000423271 PANK3Q9H999 370 aa20.96■□□□□ 0.95
USB1-202ENST00000423271 RAPGEF4Q8WZA2 1011 aa20.95■□□□□ 0.94
USB1-202ENST00000423271 TATP17735 454 aaPredicted RBP20.94■□□□□ 0.94
USB1-202ENST00000423271 STK32BQ9NY57 414 aa20.94■□□□□ 0.94
USB1-202ENST00000423271 NSD2O96028 1365 aa20.94■□□□□ 0.94
USB1-202ENST00000423271 TNNT2P45379 298 aaPredicted RBP20.93■□□□□ 0.94
USB1-202ENST00000423271 PRIM1P49642 420 aaKnown RBP20.93■□□□□ 0.94
USB1-202ENST00000423271 SLC15A2Q16348 729 aa20.93■□□□□ 0.94
USB1-202ENST00000423271 SYTL4Q96C24 671 aaPredicted RBP20.93■□□□□ 0.94
USB1-202ENST00000423271 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
USB1-202ENST00000423271 NCAPD2Q15021 1401 aa20.93■□□□□ 0.94
USB1-202ENST00000423271 SPON1Q9HCB6 807 aa20.92■□□□□ 0.94
USB1-202ENST00000423271 WASHC2AQ641Q2 1341 aa20.92■□□□□ 0.94
USB1-202ENST00000423271 LRRC4BQ9NT99 713 aa20.91■□□□□ 0.94
USB1-202ENST00000423271 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
USB1-202ENST00000423271 ZBTB7AO95365 584 aa20.89■□□□□ 0.93
USB1-202ENST00000423271 PCDH11XQ9BZA7 1347 aa20.88■□□□□ 0.93
USB1-202ENST00000423271 PCDH11YQ9BZA8 1340 aa20.88■□□□□ 0.93
USB1-202ENST00000423271 ZNF827Q17R98 1081 aa20.88■□□□□ 0.93
USB1-202ENST00000423271 LY75O60449 1722 aa20.87■□□□□ 0.93
USB1-202ENST00000423271 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
USB1-202ENST00000423271 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
USB1-202ENST00000423271 CYP27B1O15528 508 aa20.87■□□□□ 0.93
USB1-202ENST00000423271 EYA1Q99502 592 aa20.87■□□□□ 0.93
USB1-202ENST00000423271 KCNQ4P56696 695 aa20.86■□□□□ 0.93
USB1-202ENST00000423271 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
USB1-202ENST00000423271 PPP1R1BQ9UD71 204 aaPredicted RBP20.86■□□□□ 0.93
USB1-202ENST00000423271 SLC27A3Q5K4L6 730 aa20.84■□□□□ 0.93
USB1-202ENST00000423271 ATF5Q9Y2D1 282 aaPredicted RBP20.84■□□□□ 0.93
USB1-202ENST00000423271 PTGER2P43116 358 aa20.83■□□□□ 0.93
USB1-202ENST00000423271 AKT1S1Q96B36 256 aa20.83■□□□□ 0.93
USB1-202ENST00000423271 TUBGCP6Q96RT7 1819 aa20.83■□□□□ 0.92
USB1-202ENST00000423271 ITGB4P16144 1822 aa20.81■□□□□ 0.92
USB1-202ENST00000423271 MORC1Q86VD1 984 aa20.81■□□□□ 0.92
USB1-202ENST00000423271 KNSTRNQ9Y448 316 aa20.81■□□□□ 0.92
USB1-202ENST00000423271 QSER1Q2KHR3 1735 aa20.81■□□□□ 0.92
USB1-202ENST00000423271 MTFR1LQ9H019 292 aa20.8■□□□□ 0.92
USB1-202ENST00000423271 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
USB1-202ENST00000423271 CCNL1Q9UK58 526 aaPredicted RBP20.79■□□□□ 0.92
USB1-202ENST00000423271 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
USB1-202ENST00000423271 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
USB1-202ENST00000423271 MPRIPQ6WCQ1 1025 aa20.78■□□□□ 0.92
USB1-202ENST00000423271 PNPLA7Q6ZV29 1317 aa20.78■□□□□ 0.92
USB1-202ENST00000423271 SGIP1Q9BQI5 828 aa20.77■□□□□ 0.92
USB1-202ENST00000423271 PALLDQ8WX93 1383 aa20.76■□□□□ 0.91
USB1-202ENST00000423271 NKX1-1Q15270 411 aaPredicted RBP20.76■□□□□ 0.91
USB1-202ENST00000423271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.91
USB1-202ENST00000423271 C5P01031 1676 aa20.75■□□□□ 0.91
USB1-202ENST00000423271 PHKG2P15735 406 aa20.74■□□□□ 0.91
USB1-202ENST00000423271 TFCP2L1Q9NZI6 479 aa20.74■□□□□ 0.91
USB1-202ENST00000423271 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
USB1-202ENST00000423271 PIGBQ92521 554 aa20.73■□□□□ 0.91
USB1-202ENST00000423271 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
USB1-202ENST00000423271 IFNL2Q8IZJ0 200 aa20.72■□□□□ 0.91
USB1-202ENST00000423271 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
USB1-202ENST00000423271 PER1O15534 1290 aaPredicted RBP20.71■□□□□ 0.91
USB1-202ENST00000423271 FHDC1Q9C0D6 1143 aaPredicted RBP20.71■□□□□ 0.91
USB1-202ENST00000423271 COL24A1Q17RW2 1714 aa20.7■□□□□ 0.9
USB1-202ENST00000423271 CC2D1BQ5T0F9 858 aaKnown RBP20.69■□□□□ 0.9
USB1-202ENST00000423271 SMARCC1Q92922 1105 aaPredicted RBP20.69■□□□□ 0.9
USB1-202ENST00000423271 TMOD3Q9NYL9 352 aa20.69■□□□□ 0.9
USB1-202ENST00000423271 C4BP0C0L5 1744 aa20.68■□□□□ 0.9
USB1-202ENST00000423271 IL13P35225 146 aa20.68■□□□□ 0.9
USB1-202ENST00000423271 SLC16A10Q8TF71 515 aa20.68■□□□□ 0.9
USB1-202ENST00000423271 ARXQ96QS3 562 aa20.68■□□□□ 0.9
USB1-202ENST00000423271 COL23A1Q86Y22 540 aaPredicted RBP20.67■□□□□ 0.9
USB1-202ENST00000423271 SYT17Q9BSW7 474 aa20.67■□□□□ 0.9
USB1-202ENST00000423271 UTRNP46939 3433 aa20.66■□□□□ 0.9
USB1-202ENST00000423271 MTHFSP49914 203 aa20.66■□□□□ 0.9
USB1-202ENST00000423271 PLEKHO1Q53GL0 409 aaPredicted RBP20.66■□□□□ 0.9
USB1-202ENST00000423271 SULT6B1Q6IMI4 303 aa20.66■□□□□ 0.9
USB1-202ENST00000423271 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
USB1-202ENST00000423271 ASAP1Q9ULH1 1129 aa20.66■□□□□ 0.9
USB1-202ENST00000423271 KDRP35968 1356 aa20.66■□□□□ 0.9
USB1-202ENST00000423271 KDM6AO15550 1401 aaPredicted RBP20.66■□□□□ 0.9
USB1-202ENST00000423271 MSH5O43196 834 aa20.64■□□□□ 0.89
USB1-202ENST00000423271 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
USB1-202ENST00000423271 UBR3Q6ZT12 1888 aa20.63■□□□□ 0.89
USB1-202ENST00000423271 LOC102724428A0A0B4J2F2 783 aa20.63■□□□□ 0.89
USB1-202ENST00000423271 SIK1P57059 783 aa20.63■□□□□ 0.89
USB1-202ENST00000423271 AMIGO3Q86WK7 504 aa20.63■□□□□ 0.89
USB1-202ENST00000423271 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
USB1-202ENST00000423271 MAP3K5Q99683 1374 aa20.62■□□□□ 0.89
USB1-202ENST00000423271 POLD1P28340 1107 aa20.62■□□□□ 0.89
USB1-202ENST00000423271 AMOTQ4VCS5 1084 aa20.62■□□□□ 0.89
USB1-202ENST00000423271 LINC00116Q8NCU8 138 aa20.62■□□□□ 0.89
USB1-202ENST00000423271 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
USB1-202ENST00000423271 NPC1L1Q9UHC9 1359 aa20.61■□□□□ 0.89
USB1-202ENST00000423271 DCAF8L1A6NGE4 600 aa20.61■□□□□ 0.89
USB1-202ENST00000423271 HSP90AB1P08238 724 aaKnown RBP20.61■□□□□ 0.89
USB1-202ENST00000423271 ITPK1Q13572 414 aa20.61■□□□□ 0.89
USB1-202ENST00000423271 MSL1Q68DK7 614 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms