RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
NUP50-206ENST00000422489 FLT4P35916 1363 aa12.77□□□□□ -0.37
NUP50-206ENST00000422489 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
NUP50-206ENST00000422489 KCNQ4P56696 695 aa12.75□□□□□ -0.37
NUP50-206ENST00000422489 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
NUP50-206ENST00000422489 WASHC2AQ641Q2 1341 aa12.74□□□□□ -0.37
NUP50-206ENST00000422489 EYA1Q99502 592 aa12.74□□□□□ -0.37
NUP50-206ENST00000422489 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
NUP50-206ENST00000422489 KIF24Q5T7B8 1368 aa12.73□□□□□ -0.37
NUP50-206ENST00000422489 KNSTRNQ9Y448 316 aa12.73□□□□□ -0.37
NUP50-206ENST00000422489 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
NUP50-206ENST00000422489 MEGF6O75095 1541 aa12.72□□□□□ -0.37
NUP50-206ENST00000422489 NUP188Q5SRE5 1749 aa12.72□□□□□ -0.37
NUP50-206ENST00000422489 SLC27A3Q5K4L6 730 aa12.72□□□□□ -0.37
NUP50-206ENST00000422489 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
NUP50-206ENST00000422489 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
NUP50-206ENST00000422489 SPG7Q9UQ90 795 aa12.72□□□□□ -0.37
NUP50-206ENST00000422489 RREB1Q92766 1687 aa12.72□□□□□ -0.37
NUP50-206ENST00000422489 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
NUP50-206ENST00000422489 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
NUP50-206ENST00000422489 LRP5O75197 1615 aa12.71□□□□□ -0.37
NUP50-206ENST00000422489 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
NUP50-206ENST00000422489 ZNF827Q17R98 1081 aa12.71□□□□□ -0.37
NUP50-206ENST00000422489 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
NUP50-206ENST00000422489 CYP27B1O15528 508 aa12.7□□□□□ -0.38
NUP50-206ENST00000422489 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
NUP50-206ENST00000422489 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
NUP50-206ENST00000422489 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
NUP50-206ENST00000422489 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
NUP50-206ENST00000422489 SRCAPQ6ZRS2 3230 aa12.69□□□□□ -0.38
NUP50-206ENST00000422489 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
NUP50-206ENST00000422489 MTFR1LQ9H019 292 aa12.69□□□□□ -0.38
NUP50-206ENST00000422489 MYOM1P52179 1685 aa12.68□□□□□ -0.38
NUP50-206ENST00000422489 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
NUP50-206ENST00000422489 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
NUP50-206ENST00000422489 PTGER2P43116 358 aa12.67□□□□□ -0.38
NUP50-206ENST00000422489 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
NUP50-206ENST00000422489 KIF20BQ96Q89 1820 aa12.67□□□□□ -0.38
NUP50-206ENST00000422489 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
NUP50-206ENST00000422489 NSD2O96028 1365 aa12.66□□□□□ -0.38
NUP50-206ENST00000422489 PHKG2P15735 406 aa12.65□□□□□ -0.38
NUP50-206ENST00000422489 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
NUP50-206ENST00000422489 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
NUP50-206ENST00000422489 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
NUP50-206ENST00000422489 PIGBQ92521 554 aa12.65□□□□□ -0.38
NUP50-206ENST00000422489 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.38
NUP50-206ENST00000422489 ARXQ96QS3 562 aa12.65□□□□□ -0.38
NUP50-206ENST00000422489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.385e-6■□□□□ 10.1
NUP50-206ENST00000422489 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
NUP50-206ENST00000422489 RGPD2P0DJD1 1756 aa12.64□□□□□ -0.39
NUP50-206ENST00000422489 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
NUP50-206ENST00000422489 CC2D1BQ5T0F9 858 aaKnown RBP12.64□□□□□ -0.39
NUP50-206ENST00000422489 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
NUP50-206ENST00000422489 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
NUP50-206ENST00000422489 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
NUP50-206ENST00000422489 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
NUP50-206ENST00000422489 POLD1P28340 1107 aa12.63□□□□□ -0.39
NUP50-206ENST00000422489 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
NUP50-206ENST00000422489 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
NUP50-206ENST00000422489 SYT17Q9BSW7 474 aa12.63□□□□□ -0.39
NUP50-206ENST00000422489 PALLDQ8WX93 1383 aa12.63□□□□□ -0.39
NUP50-206ENST00000422489 BTAF1O14981 1849 aa12.62□□□□□ -0.39
NUP50-206ENST00000422489 HMGB2P26583 209 aaKnown RBP12.62□□□□□ -0.39
NUP50-206ENST00000422489 MTHFSP49914 203 aa12.62□□□□□ -0.39
NUP50-206ENST00000422489 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
NUP50-206ENST00000422489 IGSF1Q8N6C5 1336 aa12.62□□□□□ -0.39
NUP50-206ENST00000422489 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
NUP50-206ENST00000422489 ZNF530Q6P9A1 599 aaPredicted RBP12.61□□□□□ -0.39
NUP50-206ENST00000422489 AEBP1Q8IUX7 1158 aa12.61□□□□□ -0.39
NUP50-206ENST00000422489 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
NUP50-206ENST00000422489 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
NUP50-206ENST00000422489 PER1O15534 1290 aaPredicted RBP12.6□□□□□ -0.39
NUP50-206ENST00000422489 IL13P35225 146 aa12.6□□□□□ -0.39
NUP50-206ENST00000422489 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
NUP50-206ENST00000422489 AK7Q96M32 723 aa12.6□□□□□ -0.39
NUP50-206ENST00000422489 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
NUP50-206ENST00000422489 KAT6BQ8WYB5 2073 aa12.6□□□□□ -0.39
NUP50-206ENST00000422489 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
NUP50-206ENST00000422489 YY1P25490 414 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 SIK1P57059 783 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 CABP4P57796 275 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 SMIM5Q71RC9 77 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 FLAD1Q8NFF5 587 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
NUP50-206ENST00000422489 ERVV-2B6SEH9 535 aa12.58□□□□□ -0.4
NUP50-206ENST00000422489 PHF14O94880 888 aa12.58□□□□□ -0.4
NUP50-206ENST00000422489 HMOX1P09601 288 aa12.58□□□□□ -0.4
NUP50-206ENST00000422489 DCAF5Q96JK2 942 aa12.58□□□□□ -0.4
NUP50-206ENST00000422489 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
NUP50-206ENST00000422489 CASZ1Q86V15 1759 aa12.58□□□□□ -0.4
NUP50-206ENST00000422489 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
NUP50-206ENST00000422489 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
NUP50-206ENST00000422489 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
NUP50-206ENST00000422489 PAPPAQ13219 1627 aa12.56□□□□□ -0.4
NUP50-206ENST00000422489 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
NUP50-206ENST00000422489 ITPK1Q13572 414 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms