RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 NCAPD2Q15021 1401 aa34.17■■■■□ 3.06
SNAPC3-203ENST00000421710 PER1O15534 1290 aaPredicted RBP34.16■■■■□ 3.06
SNAPC3-203ENST00000421710 SHANK3Q9BYB0 1731 aa34.16■■■■□ 3.06
SNAPC3-203ENST00000421710 NUP188Q5SRE5 1749 aa34.14■■■■□ 3.06
SNAPC3-203ENST00000421710 ACSBG1Q96GR2 724 aa34.13■■■■□ 3.05
SNAPC3-203ENST00000421710 EIF4A2Q14240 407 aaKnown RBP34.12■■■■□ 3.05
SNAPC3-203ENST00000421710 PTF1AQ7RTS3 328 aa34.12■■■■□ 3.05
SNAPC3-203ENST00000421710 NPC1L1Q9UHC9 1359 aa34.11■■■■□ 3.05
SNAPC3-203ENST00000421710 EYA1Q99502 592 aa34.11■■■■□ 3.05
SNAPC3-203ENST00000421710 PCDH11XQ9BZA7 1347 aa34.1■■■■□ 3.05
SNAPC3-203ENST00000421710 PCDH11YQ9BZA8 1340 aa34.1■■■■□ 3.05
SNAPC3-203ENST00000421710 KCNQ2O43526 872 aa34.1■■■■□ 3.05
SNAPC3-203ENST00000421710 NBPF14Q5TI25 921 aa34.1■■■■□ 3.05
SNAPC3-203ENST00000421710 KAT6BQ8WYB5 2073 aa34.09■■■■□ 3.05
SNAPC3-203ENST00000421710 PKD1L3Q7Z443 1732 aa34.07■■■■□ 3.04
SNAPC3-203ENST00000421710 CC2D1BQ5T0F9 858 aaKnown RBP34.06■■■■□ 3.04
SNAPC3-203ENST00000421710 PLEKHG2Q9H7P9 1386 aa34.06■■■■□ 3.04
SNAPC3-203ENST00000421710 BTAF1O14981 1849 aa34.06■■■■□ 3.04
SNAPC3-203ENST00000421710 DOT1LQ8TEK3 1739 aa34.05■■■■□ 3.04
SNAPC3-203ENST00000421710 PSDA5PKW4 1024 aaPredicted RBP34.05■■■■□ 3.04
SNAPC3-203ENST00000421710 R3HDM1Q15032 1099 aaKnown RBP34.04■■■■□ 3.04
SNAPC3-203ENST00000421710 IGSF1Q8N6C5 1336 aa34.04■■■■□ 3.04
SNAPC3-203ENST00000421710 SPG7Q9UQ90 795 aa34.03■■■■□ 3.04
SNAPC3-203ENST00000421710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.01■■■■□ 3.032e-7■■■■□ 25.1
SNAPC3-203ENST00000421710 TXNRD1Q16881 649 aa34■■■■□ 3.03
SNAPC3-203ENST00000421710 SYTL4Q96C24 671 aaPredicted RBP34■■■■□ 3.03
SNAPC3-203ENST00000421710 PRIM1P49642 420 aaKnown RBP33.97■■■■□ 3.03
SNAPC3-203ENST00000421710 PROM2Q8N271 834 aa33.97■■■■□ 3.03
SNAPC3-203ENST00000421710 MTHFSP49914 203 aa33.96■■■■□ 3.03
SNAPC3-203ENST00000421710 CYP27B1O15528 508 aa33.95■■■■□ 3.03
SNAPC3-203ENST00000421710 LRP5O75197 1615 aa33.93■■■■□ 3.02
SNAPC3-203ENST00000421710 SRCAPQ6ZRS2 3230 aa33.92■■■■□ 3.02
SNAPC3-203ENST00000421710 IL13P35225 146 aa33.91■■■■□ 3.02
SNAPC3-203ENST00000421710 CNGB1Q14028 1251 aaPredicted RBP33.89■■■■□ 3.02
SNAPC3-203ENST00000421710 NKX1-1Q15270 411 aaPredicted RBP33.89■■■■□ 3.02
SNAPC3-203ENST00000421710 IFNL2Q8IZJ0 200 aa33.89■■■■□ 3.02
SNAPC3-203ENST00000421710 SLC27A3Q5K4L6 730 aa33.88■■■■□ 3.01
SNAPC3-203ENST00000421710 STK32BQ9NY57 414 aa33.88■■■■□ 3.01
SNAPC3-203ENST00000421710 KDRP35968 1356 aa33.87■■■■□ 3.01
SNAPC3-203ENST00000421710 AMOTQ4VCS5 1084 aa33.86■■■■□ 3.01
SNAPC3-203ENST00000421710 PLEKHO1Q53GL0 409 aaPredicted RBP33.86■■■■□ 3.01
SNAPC3-203ENST00000421710 ANO8Q9HCE9 1232 aaPredicted RBP33.86■■■■□ 3.01
SNAPC3-203ENST00000421710 TOGARAM1Q9Y4F4 1720 aa33.85■■■■□ 3.01
SNAPC3-203ENST00000421710 PHKG2P15735 406 aa33.85■■■■□ 3.01
SNAPC3-203ENST00000421710 SULT6B1Q6IMI4 303 aa33.85■■■■□ 3.01
SNAPC3-203ENST00000421710 DIAPH1O60610 1272 aaKnown RBP33.84■■■■□ 3.01
SNAPC3-203ENST00000421710 LY75O60449 1722 aa33.84■■■■□ 3.01
SNAPC3-203ENST00000421710 AEBP1Q8IUX7 1158 aa33.83■■■■□ 3.01
SNAPC3-203ENST00000421710 PAPPAQ13219 1627 aa33.82■■■■□ 3.01
SNAPC3-203ENST00000421710 ITGB4P16144 1822 aa33.81■■■■□ 3
SNAPC3-203ENST00000421710 HSP90AB1P08238 724 aaKnown RBP33.81■■■■□ 3
SNAPC3-203ENST00000421710 SLC15A2Q16348 729 aa33.81■■■■□ 3
SNAPC3-203ENST00000421710 MPRIPQ6WCQ1 1025 aa33.8■■■■□ 3
SNAPC3-203ENST00000421710 ZEB1P37275 1124 aaPredicted RBP33.79■■■■□ 3
SNAPC3-203ENST00000421710 HMGB2P26583 209 aaKnown RBP33.78■■■■□ 3
SNAPC3-203ENST00000421710 LRRC4BQ9NT99 713 aa33.78■■■■□ 3
SNAPC3-203ENST00000421710 COL3A1P02461 1466 aaPredicted RBP33.77■■■■□ 3
SNAPC3-203ENST00000421710 ZNF530Q6P9A1 599 aaPredicted RBP33.77■■■■□ 3
SNAPC3-203ENST00000421710 CFAP53Q96M91 514 aa33.77■■■■□ 3
SNAPC3-203ENST00000421710 SMARCC1Q92922 1105 aaPredicted RBP33.76■■■□□ 2.99
SNAPC3-203ENST00000421710 TMOD3Q9NYL9 352 aa33.75■■■□□ 2.99
SNAPC3-203ENST00000421710 CCNL1Q9UK58 526 aaPredicted RBP33.75■■■□□ 2.99
SNAPC3-203ENST00000421710 CASZ1Q86V15 1759 aa33.75■■■□□ 2.99
SNAPC3-203ENST00000421710 C1orf141Q5JVX7 400 aa33.74■■■□□ 2.99
SNAPC3-203ENST00000421710 DCAF5Q96JK2 942 aa33.74■■■□□ 2.99
SNAPC3-203ENST00000421710 PALLDQ8WX93 1383 aa33.73■■■□□ 2.99
SNAPC3-203ENST00000421710 PIGBQ92521 554 aa33.72■■■□□ 2.99
SNAPC3-203ENST00000421710 ERVV-2B6SEH9 535 aa33.7■■■□□ 2.99
SNAPC3-203ENST00000421710 HMOX1P09601 288 aa33.7■■■□□ 2.99
SNAPC3-203ENST00000421710 PPP2R1AP30153 589 aa33.7■■■□□ 2.99
SNAPC3-203ENST00000421710 SPON1Q9HCB6 807 aa33.7■■■□□ 2.99
SNAPC3-203ENST00000421710 U2SURPO15042 1029 aaKnown RBP33.67■■■□□ 2.98
SNAPC3-203ENST00000421710 ZNF827Q17R98 1081 aa33.67■■■□□ 2.98
SNAPC3-203ENST00000421710 AKT1S1Q96B36 256 aa33.67■■■□□ 2.98
SNAPC3-203ENST00000421710 QSER1Q2KHR3 1735 aa33.67■■■□□ 2.98
SNAPC3-203ENST00000421710 KDM6AO15550 1401 aaPredicted RBP33.65■■■□□ 2.98
SNAPC3-203ENST00000421710 KCNQ4P56696 695 aa33.65■■■□□ 2.98
SNAPC3-203ENST00000421710 NUDCQ9Y266 331 aa33.65■■■□□ 2.98
SNAPC3-203ENST00000421710 AKAP4Q5JQC9 854 aa33.64■■■□□ 2.98
SNAPC3-203ENST00000421710 C5P01031 1676 aa33.64■■■□□ 2.98
SNAPC3-203ENST00000421710 TFCP2L1Q9NZI6 479 aa33.62■■■□□ 2.97
SNAPC3-203ENST00000421710 CABP4P57796 275 aa33.61■■■□□ 2.97
SNAPC3-203ENST00000421710 PDGFDQ9GZP0 370 aaPredicted RBP33.61■■■□□ 2.97
SNAPC3-203ENST00000421710 TAF1LQ8IZX4 1826 aa33.6■■■□□ 2.97
SNAPC3-203ENST00000421710 MTFR1LQ9H019 292 aa33.59■■■□□ 2.97
SNAPC3-203ENST00000421710 SCN11AQ9UI33 1791 aa33.59■■■□□ 2.97
SNAPC3-203ENST00000421710 ZBTB7AO95365 584 aa33.58■■■□□ 2.97
SNAPC3-203ENST00000421710 ASAP1Q9ULH1 1129 aa33.58■■■□□ 2.97
SNAPC3-203ENST00000421710 LOC102724428A0A0B4J2F2 783 aa33.57■■■□□ 2.96
SNAPC3-203ENST00000421710 SIK1P57059 783 aa33.57■■■□□ 2.96
SNAPC3-203ENST00000421710 DDX10Q13206 875 aaKnown RBP33.57■■■□□ 2.96
SNAPC3-203ENST00000421710 PPP1R1BQ9UD71 204 aaPredicted RBP33.57■■■□□ 2.96
SNAPC3-203ENST00000421710 TUBGCP6Q96RT7 1819 aa33.56■■■□□ 2.96
SNAPC3-203ENST00000421710 ATG3Q9NT62 314 aa33.56■■■□□ 2.96
SNAPC3-203ENST00000421710 MTHFSDQ2M296 383 aaKnown RBP33.55■■■□□ 2.96
SNAPC3-203ENST00000421710 SLC16A10Q8TF71 515 aa33.55■■■□□ 2.96
SNAPC3-203ENST00000421710 PNPLA7Q6ZV29 1317 aa33.54■■■□□ 2.96
SNAPC3-203ENST00000421710 RALBP1Q15311 655 aa33.53■■■□□ 2.96
SNAPC3-203ENST00000421710 GAS2L2Q8NHY3 880 aa33.53■■■□□ 2.96
SNAPC3-203ENST00000421710 C4BP0C0L5 1744 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms