RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
FAM3A-209ENST00000421517 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
FAM3A-209ENST00000421517 EYA1Q99502 592 aa20.14■□□□□ 0.81
FAM3A-209ENST00000421517 RREB1Q92766 1687 aa20.13■□□□□ 0.81
FAM3A-209ENST00000421517 IGSF1Q8N6C5 1336 aa20.13■□□□□ 0.81
FAM3A-209ENST00000421517 PCDH11XQ9BZA7 1347 aa20.12■□□□□ 0.81
FAM3A-209ENST00000421517 PCDH11YQ9BZA8 1340 aa20.12■□□□□ 0.81
FAM3A-209ENST00000421517 TNNT2P45379 298 aaPredicted RBP20.12■□□□□ 0.81
FAM3A-209ENST00000421517 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
FAM3A-209ENST00000421517 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
FAM3A-209ENST00000421517 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-209ENST00000421517 USHBP1Q8N6Y0 703 aa20.09■□□□□ 0.81
FAM3A-209ENST00000421517 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
FAM3A-209ENST00000421517 PKD1L3Q7Z443 1732 aa20.09■□□□□ 0.81
FAM3A-209ENST00000421517 NKX1-1Q15270 411 aaPredicted RBP20.08■□□□□ 0.81
FAM3A-209ENST00000421517 NBPF14Q5TI25 921 aa20.08■□□□□ 0.81
FAM3A-209ENST00000421517 KCNQ2O43526 872 aa20.07■□□□□ 0.8
FAM3A-209ENST00000421517 HMGB2P26583 209 aaKnown RBP20.07■□□□□ 0.8
FAM3A-209ENST00000421517 KDRP35968 1356 aa20.07■□□□□ 0.8
FAM3A-209ENST00000421517 IL13P35225 146 aa20.06■□□□□ 0.8
FAM3A-209ENST00000421517 MTHFSP49914 203 aa20.06■□□□□ 0.8
FAM3A-209ENST00000421517 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
FAM3A-209ENST00000421517 CC2D1BQ5T0F9 858 aaKnown RBP20.05■□□□□ 0.8
FAM3A-209ENST00000421517 PTF1AQ7RTS3 328 aa20.05■□□□□ 0.8
FAM3A-209ENST00000421517 CYP27B1O15528 508 aa20.04■□□□□ 0.8
FAM3A-209ENST00000421517 AMOTQ4VCS5 1084 aa20.04■□□□□ 0.8
FAM3A-209ENST00000421517 PROM2Q8N271 834 aa20.04■□□□□ 0.8
FAM3A-209ENST00000421517 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
FAM3A-209ENST00000421517 ACSBG1Q96GR2 724 aa20.03■□□□□ 0.8
FAM3A-209ENST00000421517 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
FAM3A-209ENST00000421517 IFNL2Q8IZJ0 200 aa20.02■□□□□ 0.8
FAM3A-209ENST00000421517 PRIM1P49642 420 aaKnown RBP20.01■□□□□ 0.79
FAM3A-209ENST00000421517 PLEKHO1Q53GL0 409 aaPredicted RBP20■□□□□ 0.79
FAM3A-209ENST00000421517 BTAF1O14981 1849 aa19.99■□□□□ 0.79
FAM3A-209ENST00000421517 DIAPH1O60610 1272 aaKnown RBP19.99■□□□□ 0.79
FAM3A-209ENST00000421517 HSP90AB1P08238 724 aaKnown RBP19.99■□□□□ 0.79
FAM3A-209ENST00000421517 DOT1LQ8TEK3 1739 aa19.99■□□□□ 0.79
FAM3A-209ENST00000421517 PHKG2P15735 406 aa19.98■□□□□ 0.79
FAM3A-209ENST00000421517 R3HDM1Q15032 1099 aaKnown RBP19.97■□□□□ 0.79
FAM3A-209ENST00000421517 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
FAM3A-209ENST00000421517 LRP5O75197 1615 aa19.96■□□□□ 0.79
FAM3A-209ENST00000421517 SULT6B1Q6IMI4 303 aa19.96■□□□□ 0.79
FAM3A-209ENST00000421517 SYTL4Q96C24 671 aaPredicted RBP19.95■□□□□ 0.78
FAM3A-209ENST00000421517 DCAF5Q96JK2 942 aa19.95■□□□□ 0.78
FAM3A-209ENST00000421517 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
FAM3A-209ENST00000421517 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
FAM3A-209ENST00000421517 SMARCC1Q92922 1105 aaPredicted RBP19.94■□□□□ 0.78
FAM3A-209ENST00000421517 CFAP53Q96M91 514 aa19.94■□□□□ 0.78
FAM3A-209ENST00000421517 LY75O60449 1722 aa19.93■□□□□ 0.78
FAM3A-209ENST00000421517 SLC15A2Q16348 729 aa19.93■□□□□ 0.78
FAM3A-209ENST00000421517 PSDA5PKW4 1024 aaPredicted RBP19.92■□□□□ 0.78
FAM3A-209ENST00000421517 PPP2R1AP30153 589 aa19.92■□□□□ 0.78
FAM3A-209ENST00000421517 AEBP1Q8IUX7 1158 aa19.92■□□□□ 0.78
FAM3A-209ENST00000421517 STK32BQ9NY57 414 aa19.92■□□□□ 0.78
FAM3A-209ENST00000421517 SRCAPQ6ZRS2 3230 aa19.91■□□□□ 0.78
FAM3A-209ENST00000421517 ANO8Q9HCE9 1232 aaPredicted RBP19.91■□□□□ 0.78
FAM3A-209ENST00000421517 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
FAM3A-209ENST00000421517 LRRC4BQ9NT99 713 aa19.9■□□□□ 0.78
FAM3A-209ENST00000421517 AKAP4Q5JQC9 854 aa19.89■□□□□ 0.77
FAM3A-209ENST00000421517 C1orf141Q5JVX7 400 aa19.89■□□□□ 0.77
FAM3A-209ENST00000421517 MPRIPQ6WCQ1 1025 aa19.89■□□□□ 0.77
FAM3A-209ENST00000421517 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
FAM3A-209ENST00000421517 RALBP1Q15311 655 aa19.88■□□□□ 0.77
FAM3A-209ENST00000421517 ZNF530Q6P9A1 599 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-209ENST00000421517 PIGBQ92521 554 aa19.88■□□□□ 0.77
FAM3A-209ENST00000421517 TMOD3Q9NYL9 352 aa19.88■□□□□ 0.77
FAM3A-209ENST00000421517 PALLDQ8WX93 1383 aa19.87■□□□□ 0.77
FAM3A-209ENST00000421517 AKT1S1Q96B36 256 aa19.87■□□□□ 0.77
FAM3A-209ENST00000421517 ITGB4P16144 1822 aa19.86■□□□□ 0.77
FAM3A-209ENST00000421517 CCNL1Q9UK58 526 aaPredicted RBP19.86■□□□□ 0.77
FAM3A-209ENST00000421517 CASZ1Q86V15 1759 aa19.85■□□□□ 0.77
FAM3A-209ENST00000421517 QSER1Q2KHR3 1735 aa19.85■□□□□ 0.77
FAM3A-209ENST00000421517 KDM6AO15550 1401 aaPredicted RBP19.85■□□□□ 0.77
FAM3A-209ENST00000421517 SLC16A10Q8TF71 515 aa19.84■□□□□ 0.77
FAM3A-209ENST00000421517 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
FAM3A-209ENST00000421517 KAT6BQ8WYB5 2073 aa19.83■□□□□ 0.77
FAM3A-209ENST00000421517 FCHSD2O94868 740 aa19.83■□□□□ 0.77
FAM3A-209ENST00000421517 HMOX1P09601 288 aa19.83■□□□□ 0.77
FAM3A-209ENST00000421517 SPON1Q9HCB6 807 aa19.83■□□□□ 0.77
FAM3A-209ENST00000421517 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
FAM3A-209ENST00000421517 ADAMTS7Q9UKP4 1686 aa19.81■□□□□ 0.76
FAM3A-209ENST00000421517 U2SURPO15042 1029 aaKnown RBP19.81■□□□□ 0.76
FAM3A-209ENST00000421517 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
FAM3A-209ENST00000421517 ZNF827Q17R98 1081 aa19.81■□□□□ 0.76
FAM3A-209ENST00000421517 MRC1P22897 1456 aa19.8■□□□□ 0.76
FAM3A-209ENST00000421517 CABP4P57796 275 aa19.8■□□□□ 0.76
FAM3A-209ENST00000421517 MTHFSDQ2M296 383 aaKnown RBP19.8■□□□□ 0.76
FAM3A-209ENST00000421517 FLAD1Q8NFF5 587 aa19.8■□□□□ 0.76
FAM3A-209ENST00000421517 MTFR1LQ9H019 292 aa19.8■□□□□ 0.76
FAM3A-209ENST00000421517 RSPH6AQ9H0K4 717 aa19.8■□□□□ 0.76
FAM3A-209ENST00000421517 ATG3Q9NT62 314 aa19.8■□□□□ 0.76
FAM3A-209ENST00000421517 LOC102724428A0A0B4J2F2 783 aa19.79■□□□□ 0.76
FAM3A-209ENST00000421517 SIK1P57059 783 aa19.79■□□□□ 0.76
FAM3A-209ENST00000421517 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
FAM3A-209ENST00000421517 ASAP1Q9ULH1 1129 aa19.78■□□□□ 0.76
FAM3A-209ENST00000421517 SCN11AQ9UI33 1791 aa19.78■□□□□ 0.76
FAM3A-209ENST00000421517 RNMTO43148 476 aaKnown RBP19.77■□□□□ 0.76
FAM3A-209ENST00000421517 SLC52A2Q9HAB3 445 aa19.77■□□□□ 0.76
FAM3A-209ENST00000421517 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.76
FAM3A-209ENST00000421517 C5P01031 1676 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms