RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 USP54Q70EL1 1684 aa13.15□□□□□ -0.3
SCRN1-204ENST00000421434 FYB1O15117 783 aa13.15□□□□□ -0.3
SCRN1-204ENST00000421434 MSH5O43196 834 aa13.15□□□□□ -0.3
SCRN1-204ENST00000421434 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
SCRN1-204ENST00000421434 POLD1P28340 1107 aa13.15□□□□□ -0.3
SCRN1-204ENST00000421434 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
SCRN1-204ENST00000421434 SLC16A10Q8TF71 515 aa13.15□□□□□ -0.3
SCRN1-204ENST00000421434 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
SCRN1-204ENST00000421434 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
SCRN1-204ENST00000421434 TMF1P82094 1093 aa13.13□□□□□ -0.31
SCRN1-204ENST00000421434 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
SCRN1-204ENST00000421434 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
SCRN1-204ENST00000421434 HSP90AB2PQ58FF8 381 aa13.12□□□□□ -0.31
SCRN1-204ENST00000421434 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
SCRN1-204ENST00000421434 NSD2O96028 1365 aa13.11□□□□□ -0.31
SCRN1-204ENST00000421434 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
SCRN1-204ENST00000421434 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
SCRN1-204ENST00000421434 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
SCRN1-204ENST00000421434 MEGF6O75095 1541 aa13.11□□□□□ -0.31
SCRN1-204ENST00000421434 USP47Q96K76 1375 aa13.1□□□□□ -0.31
SCRN1-204ENST00000421434 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
SCRN1-204ENST00000421434 MSL1Q68DK7 614 aa13.09□□□□□ -0.31
SCRN1-204ENST00000421434 MPRIPQ6WCQ1 1025 aa13.09□□□□□ -0.31
SCRN1-204ENST00000421434 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
SCRN1-204ENST00000421434 PPM1GO15355 546 aaPredicted RBP13.08□□□□□ -0.32
SCRN1-204ENST00000421434 CGNL1Q0VF96 1302 aa13.08□□□□□ -0.32
SCRN1-204ENST00000421434 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
SCRN1-204ENST00000421434 SMG6Q86US8 1419 aaKnown RBP13.07□□□□□ -0.32
SCRN1-204ENST00000421434 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
SCRN1-204ENST00000421434 CARD14Q9BXL6 1004 aa13.07□□□□□ -0.32
SCRN1-204ENST00000421434 FAM208AQ9UK61 1670 aaKnown RBP13.06□□□□□ -0.32
SCRN1-204ENST00000421434 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
SCRN1-204ENST00000421434 CYP27B1O15528 508 aa13.06□□□□□ -0.32
SCRN1-204ENST00000421434 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
SCRN1-204ENST00000421434 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
SCRN1-204ENST00000421434 INSRP06213 1382 aa13.06□□□□□ -0.32
SCRN1-204ENST00000421434 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
SCRN1-204ENST00000421434 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCRN1-204ENST00000421434 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
SCRN1-204ENST00000421434 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
SCRN1-204ENST00000421434 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
SCRN1-204ENST00000421434 FLT4P35916 1363 aa13.04□□□□□ -0.32
SCRN1-204ENST00000421434 CHD4Q14839 1912 aa13.03□□□□□ -0.32
SCRN1-204ENST00000421434 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
SCRN1-204ENST00000421434 PIGBQ92521 554 aa13.03□□□□□ -0.32
SCRN1-204ENST00000421434 PALLDQ8WX93 1383 aa13.03□□□□□ -0.32
SCRN1-204ENST00000421434 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.32
SCRN1-204ENST00000421434 PHF14O94880 888 aa13.02□□□□□ -0.33
SCRN1-204ENST00000421434 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
SCRN1-204ENST00000421434 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
SCRN1-204ENST00000421434 LY75O60449 1722 aa13.02□□□□□ -0.33
SCRN1-204ENST00000421434 GIGYF1O75420 1035 aaPredicted RBP13.01□□□□□ -0.33
SCRN1-204ENST00000421434 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
SCRN1-204ENST00000421434 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
SCRN1-204ENST00000421434 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
SCRN1-204ENST00000421434 AK7Q96M32 723 aa13.01□□□□□ -0.33
SCRN1-204ENST00000421434 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
SCRN1-204ENST00000421434 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
SCRN1-204ENST00000421434 TUBGCP6Q96RT7 1819 aa13.01□□□□□ -0.33
SCRN1-204ENST00000421434 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
SCRN1-204ENST00000421434 KIF24Q5T7B8 1368 aa13□□□□□ -0.33
SCRN1-204ENST00000421434 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
SCRN1-204ENST00000421434 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
SCRN1-204ENST00000421434 EYA1Q99502 592 aa13□□□□□ -0.33
SCRN1-204ENST00000421434 WWC3Q9ULE0 1092 aa13□□□□□ -0.33
SCRN1-204ENST00000421434 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
SCRN1-204ENST00000421434 WASHC2AQ641Q2 1341 aa12.98□□□□□ -0.33
SCRN1-204ENST00000421434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
SCRN1-204ENST00000421434 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
SCRN1-204ENST00000421434 SIK1P57059 783 aa12.98□□□□□ -0.33
SCRN1-204ENST00000421434 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
SCRN1-204ENST00000421434 TMOD3Q9NYL9 352 aa12.98□□□□□ -0.33
SCRN1-204ENST00000421434 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
SCRN1-204ENST00000421434 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
SCRN1-204ENST00000421434 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
SCRN1-204ENST00000421434 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
SCRN1-204ENST00000421434 ATP6V1AP38606 617 aa12.96□□□□□ -0.33
SCRN1-204ENST00000421434 GNPATO15228 680 aa12.95□□□□□ -0.34
SCRN1-204ENST00000421434 PHKG2P15735 406 aa12.95□□□□□ -0.34
SCRN1-204ENST00000421434 ITPK1Q13572 414 aa12.95□□□□□ -0.34
SCRN1-204ENST00000421434 IFNL2Q8IZJ0 200 aa12.95□□□□□ -0.34
SCRN1-204ENST00000421434 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
SCRN1-204ENST00000421434 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
SCRN1-204ENST00000421434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.341e-10■□□□□ 10.4
SCRN1-204ENST00000421434 C5P01031 1676 aa12.95□□□□□ -0.34
SCRN1-204ENST00000421434 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
SCRN1-204ENST00000421434 SSFA2P28290 1259 aa12.94□□□□□ -0.34
SCRN1-204ENST00000421434 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
SCRN1-204ENST00000421434 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
SCRN1-204ENST00000421434 CEP350Q5VT06 3117 aa12.93□□□□□ -0.34
SCRN1-204ENST00000421434 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
SCRN1-204ENST00000421434 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
SCRN1-204ENST00000421434 C4BP0C0L5 1744 aa12.92□□□□□ -0.34
SCRN1-204ENST00000421434 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
SCRN1-204ENST00000421434 ATP10DQ9P241 1426 aa12.92□□□□□ -0.34
SCRN1-204ENST00000421434 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
SCRN1-204ENST00000421434 TOGARAM1Q9Y4F4 1720 aa12.92□□□□□ -0.34
SCRN1-204ENST00000421434 ITGB4P16144 1822 aa12.92□□□□□ -0.34
SCRN1-204ENST00000421434 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
SCRN1-204ENST00000421434 TAF1LQ8IZX4 1826 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms