RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
AC004540.1-205ENST00000420774 HMOX1P09601 288 aa17.05■□□□□ 0.32
AC004540.1-205ENST00000420774 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
AC004540.1-205ENST00000420774 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
AC004540.1-205ENST00000420774 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
AC004540.1-205ENST00000420774 EXOC5O00471 708 aa17.04■□□□□ 0.32
AC004540.1-205ENST00000420774 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
AC004540.1-205ENST00000420774 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
AC004540.1-205ENST00000420774 KDRP35968 1356 aa17.03■□□□□ 0.32
AC004540.1-205ENST00000420774 ANP32CO43423 234 aa17.02■□□□□ 0.32
AC004540.1-205ENST00000420774 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
AC004540.1-205ENST00000420774 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
AC004540.1-205ENST00000420774 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
AC004540.1-205ENST00000420774 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
AC004540.1-205ENST00000420774 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
AC004540.1-205ENST00000420774 CCDC184Q52MB2 194 aa17■□□□□ 0.31
AC004540.1-205ENST00000420774 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
AC004540.1-205ENST00000420774 VIRMAQ69YN4 1812 aaKnown RBP16.99■□□□□ 0.31
AC004540.1-205ENST00000420774 U2AF1L5P0DN76 240 aaPredicted RBP16.98■□□□□ 0.31
AC004540.1-205ENST00000420774 U2AF1Q01081 240 aaKnown RBP eCLIP16.98■□□□□ 0.31
AC004540.1-205ENST00000420774 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
AC004540.1-205ENST00000420774 CYP27B1O15528 508 aa16.97■□□□□ 0.31
AC004540.1-205ENST00000420774 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.31
AC004540.1-205ENST00000420774 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
AC004540.1-205ENST00000420774 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
AC004540.1-205ENST00000420774 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
AC004540.1-205ENST00000420774 SOCS7O14512 581 aa16.96■□□□□ 0.31
AC004540.1-205ENST00000420774 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
AC004540.1-205ENST00000420774 PTF1AQ7RTS3 328 aa16.96■□□□□ 0.31
AC004540.1-205ENST00000420774 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
AC004540.1-205ENST00000420774 TRIM37O94972 964 aa16.95■□□□□ 0.3
AC004540.1-205ENST00000420774 PRKAR2BP31323 418 aa16.95■□□□□ 0.3
AC004540.1-205ENST00000420774 ACSBG1Q96GR2 724 aa16.95■□□□□ 0.3
AC004540.1-205ENST00000420774 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
AC004540.1-205ENST00000420774 ITGB4P16144 1822 aa16.95■□□□□ 0.3
AC004540.1-205ENST00000420774 BTAF1O14981 1849 aa16.93■□□□□ 0.3
AC004540.1-205ENST00000420774 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
AC004540.1-205ENST00000420774 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
AC004540.1-205ENST00000420774 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
AC004540.1-205ENST00000420774 PHACTR3Q96KR7 559 aa16.93■□□□□ 0.3
AC004540.1-205ENST00000420774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.3
AC004540.1-205ENST00000420774 BCL9O00512 1426 aa16.93■□□□□ 0.3
AC004540.1-205ENST00000420774 DLG5Q8TDM6 1919 aa16.92■□□□□ 0.3
AC004540.1-205ENST00000420774 KCNQ2O43526 872 aa16.92■□□□□ 0.3
AC004540.1-205ENST00000420774 PHKG2P15735 406 aa16.92■□□□□ 0.3
AC004540.1-205ENST00000420774 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
AC004540.1-205ENST00000420774 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
AC004540.1-205ENST00000420774 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
AC004540.1-205ENST00000420774 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
AC004540.1-205ENST00000420774 FCHSD2O94868 740 aa16.9■□□□□ 0.3
AC004540.1-205ENST00000420774 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
AC004540.1-205ENST00000420774 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
AC004540.1-205ENST00000420774 MRS2Q9HD23 443 aa16.89■□□□□ 0.29
AC004540.1-205ENST00000420774 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
AC004540.1-205ENST00000420774 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
AC004540.1-205ENST00000420774 DEFB132Q7Z7B7 95 aa16.88■□□□□ 0.29
AC004540.1-205ENST00000420774 SYTL4Q96C24 671 aaPredicted RBP16.88■□□□□ 0.29
AC004540.1-205ENST00000420774 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
AC004540.1-205ENST00000420774 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
AC004540.1-205ENST00000420774 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
AC004540.1-205ENST00000420774 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
AC004540.1-205ENST00000420774 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
AC004540.1-205ENST00000420774 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
AC004540.1-205ENST00000420774 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
AC004540.1-205ENST00000420774 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
AC004540.1-205ENST00000420774 APBA3O96018 575 aa16.85■□□□□ 0.29
AC004540.1-205ENST00000420774 SF3B2Q13435 895 aaKnown RBP16.85■□□□□ 0.29
AC004540.1-205ENST00000420774 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
AC004540.1-205ENST00000420774 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 CCDC125Q86Z20 511 aa16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 GAS2L2Q8NHY3 880 aa16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 RREB1Q92766 1687 aa16.84■□□□□ 0.29
AC004540.1-205ENST00000420774 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.28
AC004540.1-205ENST00000420774 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
AC004540.1-205ENST00000420774 LY75O60449 1722 aa16.82■□□□□ 0.28
AC004540.1-205ENST00000420774 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
AC004540.1-205ENST00000420774 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
AC004540.1-205ENST00000420774 MIER1Q8N108 512 aa16.82■□□□□ 0.28
AC004540.1-205ENST00000420774 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
AC004540.1-205ENST00000420774 MRC1P22897 1456 aa16.81■□□□□ 0.28
AC004540.1-205ENST00000420774 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
AC004540.1-205ENST00000420774 RNMTO43148 476 aaKnown RBP16.81■□□□□ 0.28
AC004540.1-205ENST00000420774 BAG6P46379 1132 aa16.81■□□□□ 0.28
AC004540.1-205ENST00000420774 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
AC004540.1-205ENST00000420774 PIGBQ92521 554 aa16.81■□□□□ 0.28
AC004540.1-205ENST00000420774 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
AC004540.1-205ENST00000420774 NEFMP07197 916 aa16.8■□□□□ 0.28
AC004540.1-205ENST00000420774 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
AC004540.1-205ENST00000420774 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
AC004540.1-205ENST00000420774 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
AC004540.1-205ENST00000420774 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
AC004540.1-205ENST00000420774 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
AC004540.1-205ENST00000420774 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
AC004540.1-205ENST00000420774 RUNDC1Q96C34 613 aa16.79■□□□□ 0.28
AC004540.1-205ENST00000420774 CAMKK2Q96RR4 588 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms