RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 MEGF6O75095 1541 aa29.2■■■□□ 2.27
CPNE1-211ENST00000420363 MORC1Q86VD1 984 aa29.2■■■□□ 2.26
CPNE1-211ENST00000420363 RGPD3A6NKT7 1758 aaPredicted RBP29.2■■■□□ 2.26
CPNE1-211ENST00000420363 RGPD4Q7Z3J3 1758 aa29.2■■■□□ 2.26
CPNE1-211ENST00000420363 SHANK3Q9BYB0 1731 aa29.2■■■□□ 2.26
CPNE1-211ENST00000420363 NBPF6Q5VWK0 638 aa29.19■■■□□ 2.26
CPNE1-211ENST00000420363 NBPF4Q96M43 638 aa29.19■■■□□ 2.26
CPNE1-211ENST00000420363 ANO8Q9HCE9 1232 aaPredicted RBP29.19■■■□□ 2.26
CPNE1-211ENST00000420363 PPM1GO15355 546 aaPredicted RBP29.17■■■□□ 2.26
CPNE1-211ENST00000420363 TNNT2P45379 298 aaPredicted RBP29.17■■■□□ 2.26
CPNE1-211ENST00000420363 NHSQ6T4R5 1651 aa29.17■■■□□ 2.26
CPNE1-211ENST00000420363 TXNRD1Q16881 649 aa29.16■■■□□ 2.26
CPNE1-211ENST00000420363 STK32BQ9NY57 414 aa29.14■■■□□ 2.26
CPNE1-211ENST00000420363 DCAF8L1A6NGE4 600 aa29.13■■■□□ 2.25
CPNE1-211ENST00000420363 ACSBG1Q96GR2 724 aa29.13■■■□□ 2.25
CPNE1-211ENST00000420363 PKD1L3Q7Z443 1732 aa29.13■■■□□ 2.25
CPNE1-211ENST00000420363 PLEKHG2Q9H7P9 1386 aa29.13■■■□□ 2.25
CPNE1-211ENST00000420363 USHBP1Q8N6Y0 703 aa29.1■■■□□ 2.25
CPNE1-211ENST00000420363 RAPGEF4Q8WZA2 1011 aa29.1■■■□□ 2.25
CPNE1-211ENST00000420363 PDGFDQ9GZP0 370 aaPredicted RBP29.1■■■□□ 2.25
CPNE1-211ENST00000420363 ZBTB7AO95365 584 aa29.09■■■□□ 2.25
CPNE1-211ENST00000420363 EIF4A2Q14240 407 aaKnown RBP29.08■■■□□ 2.25
CPNE1-211ENST00000420363 SLC15A2Q16348 729 aa29.08■■■□□ 2.25
CPNE1-211ENST00000420363 TATP17735 454 aaPredicted RBP29.07■■■□□ 2.24
CPNE1-211ENST00000420363 ZCRB1Q8TBF4 217 aaKnown RBP29.07■■■□□ 2.24
CPNE1-211ENST00000420363 EYA1Q99502 592 aa29.06■■■□□ 2.24
CPNE1-211ENST00000420363 CC2D1BQ5T0F9 858 aaKnown RBP29.05■■■□□ 2.24
CPNE1-211ENST00000420363 ATF5Q9Y2D1 282 aaPredicted RBP29.05■■■□□ 2.24
CPNE1-211ENST00000420363 IGSF1Q8N6C5 1336 aa29.04■■■□□ 2.24
CPNE1-211ENST00000420363 DOT1LQ8TEK3 1739 aa29.04■■■□□ 2.24
CPNE1-211ENST00000420363 YY1P25490 414 aa29.04■■■□□ 2.24
CPNE1-211ENST00000420363 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
CPNE1-211ENST00000420363 PCDH11XQ9BZA7 1347 aa29.02■■■□□ 2.24
CPNE1-211ENST00000420363 PCDH11YQ9BZA8 1340 aa29.02■■■□□ 2.24
CPNE1-211ENST00000420363 DDX54Q8TDD1 881 aaKnown RBP29.02■■■□□ 2.24
CPNE1-211ENST00000420363 BTAF1O14981 1849 aa29.01■■■□□ 2.24
CPNE1-211ENST00000420363 CASZ1Q86V15 1759 aa29■■■□□ 2.23
CPNE1-211ENST00000420363 PTGER2P43116 358 aa28.99■■■□□ 2.23
CPNE1-211ENST00000420363 KAT6BQ8WYB5 2073 aa28.97■■■□□ 2.23
CPNE1-211ENST00000420363 MTFR1LQ9H019 292 aa28.97■■■□□ 2.23
CPNE1-211ENST00000420363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.97■■■□□ 2.231e-6■■□□□ 12.2
CPNE1-211ENST00000420363 MTHFSP49914 203 aa28.96■■■□□ 2.23
CPNE1-211ENST00000420363 KDRP35968 1356 aa28.95■■■□□ 2.22
CPNE1-211ENST00000420363 COL3A1P02461 1466 aaPredicted RBP28.95■■■□□ 2.22
CPNE1-211ENST00000420363 IL13P35225 146 aa28.93■■■□□ 2.22
CPNE1-211ENST00000420363 SPG7Q9UQ90 795 aa28.93■■■□□ 2.22
CPNE1-211ENST00000420363 TOGARAM1Q9Y4F4 1720 aa28.92■■■□□ 2.22
CPNE1-211ENST00000420363 SYTL4Q96C24 671 aaPredicted RBP28.91■■■□□ 2.22
CPNE1-211ENST00000420363 LRRC4BQ9NT99 713 aa28.91■■■□□ 2.22
CPNE1-211ENST00000420363 CYP27B1O15528 508 aa28.9■■■□□ 2.22
CPNE1-211ENST00000420363 SLC27A3Q5K4L6 730 aa28.89■■■□□ 2.22
CPNE1-211ENST00000420363 FHDC1Q9C0D6 1143 aaPredicted RBP28.89■■■□□ 2.22
CPNE1-211ENST00000420363 PRIM1P49642 420 aaKnown RBP28.88■■■□□ 2.21
CPNE1-211ENST00000420363 ZNF827Q17R98 1081 aa28.88■■■□□ 2.21
CPNE1-211ENST00000420363 SYT17Q9BSW7 474 aa28.88■■■□□ 2.21
CPNE1-211ENST00000420363 NKX1-1Q15270 411 aaPredicted RBP28.87■■■□□ 2.21
CPNE1-211ENST00000420363 LY75O60449 1722 aa28.86■■■□□ 2.21
CPNE1-211ENST00000420363 SGIP1Q9BQI5 828 aa28.86■■■□□ 2.21
CPNE1-211ENST00000420363 ITGB4P16144 1822 aa28.85■■■□□ 2.21
CPNE1-211ENST00000420363 PAPPAQ13219 1627 aa28.85■■■□□ 2.21
CPNE1-211ENST00000420363 DIAPH1O60610 1272 aaKnown RBP28.85■■■□□ 2.21
CPNE1-211ENST00000420363 ARXQ96QS3 562 aa28.85■■■□□ 2.21
CPNE1-211ENST00000420363 CNGB1Q14028 1251 aaPredicted RBP28.83■■■□□ 2.21
CPNE1-211ENST00000420363 AMOTQ4VCS5 1084 aa28.83■■■□□ 2.21
CPNE1-211ENST00000420363 SULT6B1Q6IMI4 303 aa28.83■■■□□ 2.21
CPNE1-211ENST00000420363 AEBP1Q8IUX7 1158 aa28.83■■■□□ 2.21
CPNE1-211ENST00000420363 IFNL2Q8IZJ0 200 aa28.83■■■□□ 2.21
CPNE1-211ENST00000420363 AKT1S1Q96B36 256 aa28.83■■■□□ 2.21
CPNE1-211ENST00000420363 PHKG2P15735 406 aa28.82■■■□□ 2.2
CPNE1-211ENST00000420363 KCNQ4P56696 695 aa28.8■■■□□ 2.2
CPNE1-211ENST00000420363 PLEKHO1Q53GL0 409 aaPredicted RBP28.8■■■□□ 2.2
CPNE1-211ENST00000420363 TFCP2L1Q9NZI6 479 aa28.8■■■□□ 2.2
CPNE1-211ENST00000420363 PPP2R1AP30153 589 aa28.79■■■□□ 2.2
CPNE1-211ENST00000420363 SLC16A10Q8TF71 515 aa28.79■■■□□ 2.2
CPNE1-211ENST00000420363 CFAP53Q96M91 514 aa28.78■■■□□ 2.2
CPNE1-211ENST00000420363 HSP90AB1P08238 724 aaKnown RBP28.76■■■□□ 2.19
CPNE1-211ENST00000420363 POLD1P28340 1107 aa28.75■■■□□ 2.19
CPNE1-211ENST00000420363 ZNF530Q6P9A1 599 aaPredicted RBP28.74■■■□□ 2.19
CPNE1-211ENST00000420363 CCNL1Q9UK58 526 aaPredicted RBP28.74■■■□□ 2.19
CPNE1-211ENST00000420363 PNPLA7Q6ZV29 1317 aa28.73■■■□□ 2.19
CPNE1-211ENST00000420363 KDM6AO15550 1401 aaPredicted RBP28.72■■■□□ 2.19
CPNE1-211ENST00000420363 DDX10Q13206 875 aaKnown RBP28.72■■■□□ 2.19
CPNE1-211ENST00000420363 DCAF5Q96JK2 942 aa28.72■■■□□ 2.19
CPNE1-211ENST00000420363 HMOX1P09601 288 aa28.71■■■□□ 2.19
CPNE1-211ENST00000420363 HMGB2P26583 209 aaKnown RBP28.71■■■□□ 2.19
CPNE1-211ENST00000420363 KLHL34Q8N239 644 aa28.71■■■□□ 2.19
CPNE1-211ENST00000420363 QSER1Q2KHR3 1735 aa28.71■■■□□ 2.19
CPNE1-211ENST00000420363 SCN11AQ9UI33 1791 aa28.7■■■□□ 2.19
CPNE1-211ENST00000420363 MPRIPQ6WCQ1 1025 aa28.7■■■□□ 2.18
CPNE1-211ENST00000420363 MAP3K5Q99683 1374 aa28.7■■■□□ 2.18
CPNE1-211ENST00000420363 C1orf141Q5JVX7 400 aa28.69■■■□□ 2.18
CPNE1-211ENST00000420363 PALLDQ8WX93 1383 aa28.69■■■□□ 2.18
CPNE1-211ENST00000420363 C5P01031 1676 aa28.68■■■□□ 2.18
CPNE1-211ENST00000420363 ADAMTS7Q9UKP4 1686 aa28.68■■■□□ 2.18
CPNE1-211ENST00000420363 ERVV-2B6SEH9 535 aa28.68■■■□□ 2.18
CPNE1-211ENST00000420363 U2SURPO15042 1029 aaKnown RBP28.68■■■□□ 2.18
CPNE1-211ENST00000420363 MSH5O43196 834 aa28.68■■■□□ 2.18
CPNE1-211ENST00000420363 RALBP1Q15311 655 aa28.68■■■□□ 2.18
CPNE1-211ENST00000420363 SMARCC1Q92922 1105 aaPredicted RBP28.68■■■□□ 2.18
CPNE1-211ENST00000420363 TMOD3Q9NYL9 352 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms