RNA–Protein interactions for RNA: ENST00000418590.3

SBF1-204, Transcript of SET binding factor 1, humanhuman

TSL 1 (best)

Gene SBF1, Length 1,578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-204ENST00000418590 TRIM35Q9UPQ4 493 aa20.96■□□□□ 0.95
SBF1-204ENST00000418590 NCAPD2Q15021 1401 aa20.95■□□□□ 0.94
SBF1-204ENST00000418590 RIPK4P57078 832 aa20.95■□□□□ 0.94
SBF1-204ENST00000418590 WDR63Q8IWG1 891 aa20.95■□□□□ 0.94
SBF1-204ENST00000418590 SEPT12Q8IYM1 358 aa20.95■□□□□ 0.94
SBF1-204ENST00000418590 SPINK5Q9NQ38 1064 aaPredicted RBP20.95■□□□□ 0.94
SBF1-204ENST00000418590 FAM98CQ17RN3 349 aaKnown RBP20.94■□□□□ 0.94
SBF1-204ENST00000418590 DUSP27Q5VZP5 1158 aa20.94■□□□□ 0.94
SBF1-204ENST00000418590 ANKRD24Q8TF21 1146 aa20.94■□□□□ 0.94
SBF1-204ENST00000418590 EP400Q96L91 3159 aa20.94■□□□□ 0.94
SBF1-204ENST00000418590 RGPD5Q99666 1765 aa20.94■□□□□ 0.94
SBF1-204ENST00000418590 ERBB3P21860 1342 aa20.94■□□□□ 0.94
SBF1-204ENST00000418590 E9PSI1 815 aa20.93■□□□□ 0.94
SBF1-204ENST00000418590 TRMT2AQ8IZ69 625 aaKnown RBP20.93■□□□□ 0.94
SBF1-204ENST00000418590 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
SBF1-204ENST00000418590 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
SBF1-204ENST00000418590 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
SBF1-204ENST00000418590 RGPD2P0DJD1 1756 aa20.92■□□□□ 0.94
SBF1-204ENST00000418590 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
SBF1-204ENST00000418590 USHBP1Q8N6Y0 703 aa20.9■□□□□ 0.94
SBF1-204ENST00000418590 USP35Q9P2H5 1018 aa20.9■□□□□ 0.94
SBF1-204ENST00000418590 DLG5Q8TDM6 1919 aa20.9■□□□□ 0.94
SBF1-204ENST00000418590 FAM208AQ9UK61 1670 aaKnown RBP20.9■□□□□ 0.94
SBF1-204ENST00000418590 FAM182BQ5T319 152 aa20.89■□□□□ 0.94
SBF1-204ENST00000418590 SUPT16HQ9Y5B9 1047 aaKnown RBP20.89■□□□□ 0.94
SBF1-204ENST00000418590 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
SBF1-204ENST00000418590 IL16Q14005 1332 aa20.87■□□□□ 0.93
SBF1-204ENST00000418590 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
SBF1-204ENST00000418590 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
SBF1-204ENST00000418590 EVA1CP58658 441 aa20.86■□□□□ 0.93
SBF1-204ENST00000418590 MTHFSDQ2M296 383 aaKnown RBP20.86■□□□□ 0.93
SBF1-204ENST00000418590 LARP1Q6PKG0 1096 aaKnown RBP20.85■□□□□ 0.93
SBF1-204ENST00000418590 GAS2L2Q8NHY3 880 aa20.85■□□□□ 0.93
SBF1-204ENST00000418590 COL5A2P05997 1499 aaPredicted RBP20.85■□□□□ 0.93
SBF1-204ENST00000418590 KRT27Q7Z3Y8 459 aa20.84■□□□□ 0.93
SBF1-204ENST00000418590 MYH16Q9H6N6 1097 aa20.84■□□□□ 0.93
SBF1-204ENST00000418590 RCAN3Q9UKA8 241 aa20.84■□□□□ 0.93
SBF1-204ENST00000418590 ONECUT3O60422 494 aaPredicted RBP20.83■□□□□ 0.92
SBF1-204ENST00000418590 SPATA31A1Q5TZJ5 1347 aa20.82■□□□□ 0.92
SBF1-204ENST00000418590 RNF123Q5XPI4 1314 aa20.82■□□□□ 0.92
SBF1-204ENST00000418590 CSB-PGBD3P0DP91 1061 aa20.81■□□□□ 0.92
SBF1-204ENST00000418590 CALD1Q05682 793 aaKnown RBP20.81■□□□□ 0.92
SBF1-204ENST00000418590 THUMPD2Q9BTF0 503 aaKnown RBP20.81■□□□□ 0.92
SBF1-204ENST00000418590 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
SBF1-204ENST00000418590 NLRP2Q9NX02 1062 aa20.8■□□□□ 0.92
SBF1-204ENST00000418590 WDR17Q8IZU2 1322 aa20.8■□□□□ 0.92
SBF1-204ENST00000418590 NEFLP07196 543 aa20.79■□□□□ 0.92
SBF1-204ENST00000418590 DCTN1Q14203 1278 aa20.79■□□□□ 0.92
SBF1-204ENST00000418590 DEFB132Q7Z7B7 95 aa20.79■□□□□ 0.92
SBF1-204ENST00000418590 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
SBF1-204ENST00000418590 TSR2Q969E8 191 aaKnown RBP20.78■□□□□ 0.92
SBF1-204ENST00000418590 MAP3K5Q99683 1374 aa20.78■□□□□ 0.92
SBF1-204ENST00000418590 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
SBF1-204ENST00000418590 IFT57Q9NWB7 429 aa20.77■□□□□ 0.92
SBF1-204ENST00000418590 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.92
SBF1-204ENST00000418590 MEGF6O75095 1541 aa20.77■□□□□ 0.92
SBF1-204ENST00000418590 HTATSF1O43719 755 aaKnown RBP20.76■□□□□ 0.91
SBF1-204ENST00000418590 MCM10Q7L590 875 aa20.76■□□□□ 0.91
SBF1-204ENST00000418590 ZNF853P0CG23 659 aa20.76■□□□□ 0.91
SBF1-204ENST00000418590 GNAI1P63096 354 aa20.76■□□□□ 0.91
SBF1-204ENST00000418590 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
SBF1-204ENST00000418590 PLEKHO1Q53GL0 409 aaPredicted RBP20.76■□□□□ 0.91
SBF1-204ENST00000418590 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
SBF1-204ENST00000418590 CRB1P82279 1406 aa20.75■□□□□ 0.91
SBF1-204ENST00000418590 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
SBF1-204ENST00000418590 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
SBF1-204ENST00000418590 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
SBF1-204ENST00000418590 FKBP8Q14318 412 aa20.74■□□□□ 0.91
SBF1-204ENST00000418590 RAPGEF4Q8WZA2 1011 aa20.74■□□□□ 0.91
SBF1-204ENST00000418590 TOM1L2Q6ZVM7 507 aa20.73■□□□□ 0.91
SBF1-204ENST00000418590 TATP17735 454 aaPredicted RBP20.72■□□□□ 0.91
SBF1-204ENST00000418590 ZNF530Q6P9A1 599 aaPredicted RBP20.72■□□□□ 0.91
SBF1-204ENST00000418590 MBIPQ9NS73 344 aa20.72■□□□□ 0.91
SBF1-204ENST00000418590 LAS1LQ9Y4W2 734 aaKnown RBP20.72■□□□□ 0.91
SBF1-204ENST00000418590 PKD1L3Q7Z443 1732 aa20.71■□□□□ 0.91
SBF1-204ENST00000418590 CT47B1P0C2W7 299 aaPredicted RBP20.71■□□□□ 0.91
SBF1-204ENST00000418590 EXOSC9Q06265 439 aaKnown RBP20.71■□□□□ 0.91
SBF1-204ENST00000418590 AKAP4Q5JQC9 854 aa20.71■□□□□ 0.91
SBF1-204ENST00000418590 CARD10Q9BWT7 1032 aa20.71■□□□□ 0.91
SBF1-204ENST00000418590 PARP4Q9UKK3 1724 aaKnown RBP20.7■□□□□ 0.9
SBF1-204ENST00000418590 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
SBF1-204ENST00000418590 IRX6P78412 446 aaPredicted RBP20.7■□□□□ 0.9
SBF1-204ENST00000418590 CEMIPQ8WUJ3 1361 aa20.7■□□□□ 0.9
SBF1-204ENST00000418590 SF3B2Q13435 895 aaKnown RBP20.69■□□□□ 0.9
SBF1-204ENST00000418590 IL17REQ8NFR9 667 aa20.69■□□□□ 0.9
SBF1-204ENST00000418590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.69■□□□□ 0.9
SBF1-204ENST00000418590 CHL1O00533 1208 aa20.68■□□□□ 0.9
SBF1-204ENST00000418590 BARGINQ6ZT62 677 aa20.68■□□□□ 0.9
SBF1-204ENST00000418590 CCDC125Q86Z20 511 aa20.68■□□□□ 0.9
SBF1-204ENST00000418590 ADAMTS7Q9UKP4 1686 aa20.67■□□□□ 0.9
SBF1-204ENST00000418590 C1orf141Q5JVX7 400 aa20.67■□□□□ 0.9
SBF1-204ENST00000418590 SPG7Q9UQ90 795 aa20.67■□□□□ 0.9
SBF1-204ENST00000418590 TRIM37O94972 964 aa20.66■□□□□ 0.9
SBF1-204ENST00000418590 RARSP54136 660 aaKnown RBP20.66■□□□□ 0.9
SBF1-204ENST00000418590 BCAR3O75815 825 aa20.64■□□□□ 0.9
SBF1-204ENST00000418590 EN1Q05925 392 aaPredicted RBP20.64■□□□□ 0.9
SBF1-204ENST00000418590 IL2RBP14784 551 aa20.63■□□□□ 0.89
SBF1-204ENST00000418590 LGR6Q9HBX8 967 aa20.63■□□□□ 0.89
SBF1-204ENST00000418590 PLIN1O60240 522 aa20.62■□□□□ 0.89
SBF1-204ENST00000418590 PHKG2P15735 406 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms