RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 RREB1Q92766 1687 aa20.96■□□□□ 0.95
NUP50-204ENST00000417702 MAP2P11137 1827 aaKnown RBP20.95■□□□□ 0.94
NUP50-204ENST00000417702 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
NUP50-204ENST00000417702 RGPD3A6NKT7 1758 aaPredicted RBP20.94■□□□□ 0.94
NUP50-204ENST00000417702 RGPD4Q7Z3J3 1758 aa20.94■□□□□ 0.94
NUP50-204ENST00000417702 NUP188Q5SRE5 1749 aa20.93■□□□□ 0.94
NUP50-204ENST00000417702 TXNRD1Q16881 649 aa20.93■□□□□ 0.94
NUP50-204ENST00000417702 NHSQ6T4R5 1651 aa20.93■□□□□ 0.94
NUP50-204ENST00000417702 PROM2Q8N271 834 aa20.92■□□□□ 0.94
NUP50-204ENST00000417702 SYTL4Q96C24 671 aaPredicted RBP20.91■□□□□ 0.94
NUP50-204ENST00000417702 EYA1Q99502 592 aa20.91■□□□□ 0.94
NUP50-204ENST00000417702 SRCAPQ6ZRS2 3230 aa20.9■□□□□ 0.94
NUP50-204ENST00000417702 PCDH11XQ9BZA7 1347 aa20.9■□□□□ 0.94
NUP50-204ENST00000417702 PCDH11YQ9BZA8 1340 aa20.9■□□□□ 0.94
NUP50-204ENST00000417702 PRIM1P49642 420 aaKnown RBP20.9■□□□□ 0.94
NUP50-204ENST00000417702 AMER1Q5JTC6 1135 aaPredicted RBP20.9■□□□□ 0.94
NUP50-204ENST00000417702 EIF4A2Q14240 407 aaKnown RBP20.89■□□□□ 0.93
NUP50-204ENST00000417702 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
NUP50-204ENST00000417702 ANO8Q9HCE9 1232 aaPredicted RBP20.87■□□□□ 0.93
NUP50-204ENST00000417702 STK32BQ9NY57 414 aa20.87■□□□□ 0.93
NUP50-204ENST00000417702 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
NUP50-204ENST00000417702 LRP5O75197 1615 aa20.86■□□□□ 0.93
NUP50-204ENST00000417702 BTAF1O14981 1849 aa20.85■□□□□ 0.93
NUP50-204ENST00000417702 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
NUP50-204ENST00000417702 SHANK3Q9BYB0 1731 aa20.84■□□□□ 0.93
NUP50-204ENST00000417702 CYP27B1O15528 508 aa20.84■□□□□ 0.93
NUP50-204ENST00000417702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.84■□□□□ 0.935e-6■□□□□ 10.1
NUP50-204ENST00000417702 CC2D1BQ5T0F9 858 aaKnown RBP20.83■□□□□ 0.93
NUP50-204ENST00000417702 SLC15A2Q16348 729 aa20.82■□□□□ 0.92
NUP50-204ENST00000417702 SLC27A3Q5K4L6 730 aa20.82■□□□□ 0.92
NUP50-204ENST00000417702 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
NUP50-204ENST00000417702 DOT1LQ8TEK3 1739 aa20.81■□□□□ 0.92
NUP50-204ENST00000417702 SPON1Q9HCB6 807 aa20.8■□□□□ 0.92
NUP50-204ENST00000417702 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
NUP50-204ENST00000417702 NPC1L1Q9UHC9 1359 aa20.78■□□□□ 0.92
NUP50-204ENST00000417702 MTHFSP49914 203 aa20.78■□□□□ 0.92
NUP50-204ENST00000417702 NKX1-1Q15270 411 aaPredicted RBP20.78■□□□□ 0.92
NUP50-204ENST00000417702 MPRIPQ6WCQ1 1025 aa20.78■□□□□ 0.92
NUP50-204ENST00000417702 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
NUP50-204ENST00000417702 LRRC4BQ9NT99 713 aa20.78■□□□□ 0.92
NUP50-204ENST00000417702 PKD1L3Q7Z443 1732 aa20.78■□□□□ 0.92
NUP50-204ENST00000417702 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
NUP50-204ENST00000417702 PLEKHO1Q53GL0 409 aaPredicted RBP20.76■□□□□ 0.91
NUP50-204ENST00000417702 PHKG2P15735 406 aa20.75■□□□□ 0.91
NUP50-204ENST00000417702 IL13P35225 146 aa20.75■□□□□ 0.91
NUP50-204ENST00000417702 PPP1R1BQ9UD71 204 aaPredicted RBP20.75■□□□□ 0.91
NUP50-204ENST00000417702 CCNL1Q9UK58 526 aaPredicted RBP20.75■□□□□ 0.91
NUP50-204ENST00000417702 AMOTQ4VCS5 1084 aa20.74■□□□□ 0.91
NUP50-204ENST00000417702 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
NUP50-204ENST00000417702 PDGFDQ9GZP0 370 aaPredicted RBP20.74■□□□□ 0.91
NUP50-204ENST00000417702 ZBTB7AO95365 584 aa20.73■□□□□ 0.91
NUP50-204ENST00000417702 HMGB2P26583 209 aaKnown RBP20.73■□□□□ 0.91
NUP50-204ENST00000417702 KCNQ4P56696 695 aa20.73■□□□□ 0.91
NUP50-204ENST00000417702 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
NUP50-204ENST00000417702 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
NUP50-204ENST00000417702 SMARCC1Q92922 1105 aaPredicted RBP20.73■□□□□ 0.91
NUP50-204ENST00000417702 HSP90AB1P08238 724 aaKnown RBP20.72■□□□□ 0.91
NUP50-204ENST00000417702 AKT1S1Q96B36 256 aa20.72■□□□□ 0.91
NUP50-204ENST00000417702 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
NUP50-204ENST00000417702 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
NUP50-204ENST00000417702 PIGBQ92521 554 aa20.71■□□□□ 0.91
NUP50-204ENST00000417702 TMOD3Q9NYL9 352 aa20.71■□□□□ 0.91
NUP50-204ENST00000417702 PALLDQ8WX93 1383 aa20.71■□□□□ 0.91
NUP50-204ENST00000417702 DIAPH1O60610 1272 aaKnown RBP20.7■□□□□ 0.9
NUP50-204ENST00000417702 TFCP2L1Q9NZI6 479 aa20.7■□□□□ 0.9
NUP50-204ENST00000417702 CASZ1Q86V15 1759 aa20.69■□□□□ 0.9
NUP50-204ENST00000417702 MTFR1LQ9H019 292 aa20.69■□□□□ 0.9
NUP50-204ENST00000417702 ATF5Q9Y2D1 282 aaPredicted RBP20.69■□□□□ 0.9
NUP50-204ENST00000417702 LY75O60449 1722 aa20.69■□□□□ 0.9
NUP50-204ENST00000417702 KDRP35968 1356 aa20.69■□□□□ 0.9
NUP50-204ENST00000417702 C1orf141Q5JVX7 400 aa20.68■□□□□ 0.9
NUP50-204ENST00000417702 DCAF5Q96JK2 942 aa20.68■□□□□ 0.9
NUP50-204ENST00000417702 TOGARAM1Q9Y4F4 1720 aa20.67■□□□□ 0.9
NUP50-204ENST00000417702 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
NUP50-204ENST00000417702 ITGB4P16144 1822 aa20.66■□□□□ 0.9
NUP50-204ENST00000417702 HMOX1P09601 288 aa20.65■□□□□ 0.9
NUP50-204ENST00000417702 SLC16A10Q8TF71 515 aa20.64■□□□□ 0.89
NUP50-204ENST00000417702 PNPLA7Q6ZV29 1317 aa20.63■□□□□ 0.89
NUP50-204ENST00000417702 PTGER2P43116 358 aa20.63■□□□□ 0.89
NUP50-204ENST00000417702 CABP4P57796 275 aa20.63■□□□□ 0.89
NUP50-204ENST00000417702 CFAP53Q96M91 514 aa20.63■□□□□ 0.89
NUP50-204ENST00000417702 ASAP1Q9ULH1 1129 aa20.63■□□□□ 0.89
NUP50-204ENST00000417702 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
NUP50-204ENST00000417702 U2SURPO15042 1029 aaKnown RBP20.62■□□□□ 0.89
NUP50-204ENST00000417702 SIK1P57059 783 aa20.62■□□□□ 0.89
NUP50-204ENST00000417702 ATG3Q9NT62 314 aa20.61■□□□□ 0.89
NUP50-204ENST00000417702 MSH5O43196 834 aa20.6■□□□□ 0.89
NUP50-204ENST00000417702 AKAP4Q5JQC9 854 aa20.6■□□□□ 0.89
NUP50-204ENST00000417702 FLAD1Q8NFF5 587 aa20.59■□□□□ 0.89
NUP50-204ENST00000417702 AK7Q96M32 723 aa20.59■□□□□ 0.89
NUP50-204ENST00000417702 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
NUP50-204ENST00000417702 POLD1P28340 1107 aa20.58■□□□□ 0.89
NUP50-204ENST00000417702 PPP2R1AP30153 589 aa20.58■□□□□ 0.89
NUP50-204ENST00000417702 ATP6V1AP38606 617 aa20.58■□□□□ 0.89
NUP50-204ENST00000417702 SGIP1Q9BQI5 828 aa20.58■□□□□ 0.89
NUP50-204ENST00000417702 QSER1Q2KHR3 1735 aa20.58■□□□□ 0.88
NUP50-204ENST00000417702 COL3A1P02461 1466 aaPredicted RBP20.57■□□□□ 0.88
NUP50-204ENST00000417702 COL23A1Q86Y22 540 aaPredicted RBP20.57■□□□□ 0.88
NUP50-204ENST00000417702 ARXQ96QS3 562 aa20.57■□□□□ 0.88
NUP50-204ENST00000417702 NUDCQ9Y266 331 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms