RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 NBPF4Q96M43 638 aa14.13□□□□□ -0.15
HDLBP-206ENST00000417540 KAT6BQ8WYB5 2073 aa14.13□□□□□ -0.15
HDLBP-206ENST00000417540 ACSBG1Q96GR2 724 aa14.12□□□□□ -0.15
HDLBP-206ENST00000417540 KIF24Q5T7B8 1368 aa14.11□□□□□ -0.15
HDLBP-206ENST00000417540 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
HDLBP-206ENST00000417540 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
HDLBP-206ENST00000417540 KCNQ2O43526 872 aa14.1□□□□□ -0.15
HDLBP-206ENST00000417540 APBA3O96018 575 aa14.1□□□□□ -0.15
HDLBP-206ENST00000417540 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
HDLBP-206ENST00000417540 CAMKK2Q96RR4 588 aa14.1□□□□□ -0.15
HDLBP-206ENST00000417540 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
HDLBP-206ENST00000417540 C5P01031 1676 aa14.1□□□□□ -0.15
HDLBP-206ENST00000417540 TAF1LQ8IZX4 1826 aa14.09□□□□□ -0.15
HDLBP-206ENST00000417540 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
HDLBP-206ENST00000417540 CDCA7Q9BWT1 371 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-206ENST00000417540 QSER1Q2KHR3 1735 aa14.07□□□□□ -0.16
HDLBP-206ENST00000417540 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
HDLBP-206ENST00000417540 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
HDLBP-206ENST00000417540 R3HDM1Q15032 1099 aaKnown RBP14.06□□□□□ -0.16
HDLBP-206ENST00000417540 EXOC5O00471 708 aa14.05□□□□□ -0.16
HDLBP-206ENST00000417540 CC2D1BQ5T0F9 858 aaKnown RBP14.05□□□□□ -0.16
HDLBP-206ENST00000417540 AEBP1Q8IUX7 1158 aa14.04□□□□□ -0.16
HDLBP-206ENST00000417540 DDX54Q8TDD1 881 aaKnown RBP14.04□□□□□ -0.16
HDLBP-206ENST00000417540 EYA1Q99502 592 aa14.04□□□□□ -0.16
HDLBP-206ENST00000417540 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
HDLBP-206ENST00000417540 SCN11AQ9UI33 1791 aa14.04□□□□□ -0.16
HDLBP-206ENST00000417540 PER1O15534 1290 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-206ENST00000417540 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-206ENST00000417540 KDM6AO15550 1401 aaPredicted RBP14.02□□□□□ -0.16
HDLBP-206ENST00000417540 MORC1Q86VD1 984 aa14.02□□□□□ -0.17
HDLBP-206ENST00000417540 KNSTRNQ9Y448 316 aa14.02□□□□□ -0.17
HDLBP-206ENST00000417540 GOLGB1Q14789 3259 aaKnown RBP14.02□□□□□ -0.17
HDLBP-206ENST00000417540 COL5A3P25940 1745 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-206ENST00000417540 CYP27B1O15528 508 aa14.01□□□□□ -0.17
HDLBP-206ENST00000417540 PROM2Q8N271 834 aa14.01□□□□□ -0.17
HDLBP-206ENST00000417540 UTRNP46939 3433 aa14.01□□□□□ -0.17
HDLBP-206ENST00000417540 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
HDLBP-206ENST00000417540 PCDH11XQ9BZA7 1347 aa14□□□□□ -0.17
HDLBP-206ENST00000417540 PCDH11YQ9BZA8 1340 aa14□□□□□ -0.17
HDLBP-206ENST00000417540 TATP17735 454 aaPredicted RBP14□□□□□ -0.17
HDLBP-206ENST00000417540 ZCRB1Q8TBF4 217 aaKnown RBP14□□□□□ -0.17
HDLBP-206ENST00000417540 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
HDLBP-206ENST00000417540 PDGFDQ9GZP0 370 aaPredicted RBP14□□□□□ -0.17
HDLBP-206ENST00000417540 C4BP0C0L5 1744 aa14□□□□□ -0.17
HDLBP-206ENST00000417540 TJP1Q07157 1748 aa14□□□□□ -0.17
HDLBP-206ENST00000417540 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
HDLBP-206ENST00000417540 KCNQ4P56696 695 aa13.99□□□□□ -0.17
HDLBP-206ENST00000417540 ZNF827Q17R98 1081 aa13.99□□□□□ -0.17
HDLBP-206ENST00000417540 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
HDLBP-206ENST00000417540 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-206ENST00000417540 SIPA1L3O60292 1781 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-206ENST00000417540 COL24A1Q17RW2 1714 aa13.98□□□□□ -0.17
HDLBP-206ENST00000417540 KDRP35968 1356 aa13.97□□□□□ -0.17
HDLBP-206ENST00000417540 NPC1L1Q9UHC9 1359 aa13.97□□□□□ -0.17
HDLBP-206ENST00000417540 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
HDLBP-206ENST00000417540 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
HDLBP-206ENST00000417540 MRC1P22897 1456 aa13.96□□□□□ -0.17
HDLBP-206ENST00000417540 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
HDLBP-206ENST00000417540 CICQ96RK0 1608 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-206ENST00000417540 PLSCR1O15162 318 aa13.95□□□□□ -0.18
HDLBP-206ENST00000417540 IL13P35225 146 aa13.95□□□□□ -0.18
HDLBP-206ENST00000417540 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
HDLBP-206ENST00000417540 MTHFSP49914 203 aa13.94□□□□□ -0.18
HDLBP-206ENST00000417540 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
HDLBP-206ENST00000417540 DLG5Q8TDM6 1919 aa13.94□□□□□ -0.18
HDLBP-206ENST00000417540 PHKG2P15735 406 aa13.93□□□□□ -0.18
HDLBP-206ENST00000417540 HMOX1P09601 288 aa13.92□□□□□ -0.18
HDLBP-206ENST00000417540 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
HDLBP-206ENST00000417540 ZNF831Q5JPB2 1677 aa13.91□□□□□ -0.18
HDLBP-206ENST00000417540 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.18
HDLBP-206ENST00000417540 PLEKHG2Q9H7P9 1386 aa13.9□□□□□ -0.18
HDLBP-206ENST00000417540 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.19
HDLBP-206ENST00000417540 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
HDLBP-206ENST00000417540 ZBTB7AO95365 584 aa13.89□□□□□ -0.19
HDLBP-206ENST00000417540 ZNF530Q6P9A1 599 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-206ENST00000417540 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
HDLBP-206ENST00000417540 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
HDLBP-206ENST00000417540 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
HDLBP-206ENST00000417540 SLC15A2Q16348 729 aa13.87□□□□□ -0.19
HDLBP-206ENST00000417540 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
HDLBP-206ENST00000417540 PIGBQ92521 554 aa13.87□□□□□ -0.19
HDLBP-206ENST00000417540 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
HDLBP-206ENST00000417540 STK32BQ9NY57 414 aa13.87□□□□□ -0.19
HDLBP-206ENST00000417540 CCNL1Q9UK58 526 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-206ENST00000417540 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
HDLBP-206ENST00000417540 YY1P25490 414 aa13.86□□□□□ -0.19
HDLBP-206ENST00000417540 NKX1-1Q15270 411 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-206ENST00000417540 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
HDLBP-206ENST00000417540 DIAPH1O60610 1272 aaKnown RBP13.85□□□□□ -0.19
HDLBP-206ENST00000417540 IFNL2Q8IZJ0 200 aa13.85□□□□□ -0.19
HDLBP-206ENST00000417540 LINC00116Q8NCU8 138 aa13.84□□□□□ -0.19
HDLBP-206ENST00000417540 ASAP1Q9ULH1 1129 aa13.84□□□□□ -0.19
HDLBP-206ENST00000417540 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
HDLBP-206ENST00000417540 ITPK1Q13572 414 aa13.83□□□□□ -0.2
HDLBP-206ENST00000417540 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
HDLBP-206ENST00000417540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.22e-23■□□□□ 10.6
HDLBP-206ENST00000417540 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
HDLBP-206ENST00000417540 KIAA1551Q9HCM1 1747 aa13.83□□□□□ -0.2
HDLBP-206ENST00000417540 KDM3BQ7LBC6 1761 aa13.83□□□□□ -0.2
HDLBP-206ENST00000417540 LAMB4A4D0S4 1761 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms