RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 USHBP1Q8N6Y0 703 aa29.65■■■□□ 2.34
CKLF-205ENST00000417030 TATP17735 454 aaPredicted RBP29.63■■■□□ 2.33
CKLF-205ENST00000417030 PTF1AQ7RTS3 328 aa29.63■■■□□ 2.33
CKLF-205ENST00000417030 MTHFSP49914 203 aa29.61■■■□□ 2.33
CKLF-205ENST00000417030 KCNQ2O43526 872 aa29.6■■■□□ 2.33
CKLF-205ENST00000417030 EIF4A2Q14240 407 aaKnown RBP29.6■■■□□ 2.33
CKLF-205ENST00000417030 ACSBG1Q96GR2 724 aa29.6■■■□□ 2.33
CKLF-205ENST00000417030 MEGF6O75095 1541 aa29.6■■■□□ 2.33
CKLF-205ENST00000417030 NBPF14Q5TI25 921 aa29.59■■■□□ 2.33
CKLF-205ENST00000417030 NCAPD2Q15021 1401 aa29.58■■■□□ 2.33
CKLF-205ENST00000417030 EYA1Q99502 592 aa29.57■■■□□ 2.32
CKLF-205ENST00000417030 PSDA5PKW4 1024 aaPredicted RBP29.55■■■□□ 2.32
CKLF-205ENST00000417030 R3HDM1Q15032 1099 aaKnown RBP29.54■■■□□ 2.32
CKLF-205ENST00000417030 RREB1Q92766 1687 aa29.53■■■□□ 2.32
CKLF-205ENST00000417030 RGPD3A6NKT7 1758 aaPredicted RBP29.52■■■□□ 2.32
CKLF-205ENST00000417030 RGPD4Q7Z3J3 1758 aa29.52■■■□□ 2.32
CKLF-205ENST00000417030 PPP2R1AP30153 589 aa29.52■■■□□ 2.32
CKLF-205ENST00000417030 NHSQ6T4R5 1651 aa29.51■■■□□ 2.31
CKLF-205ENST00000417030 PROM2Q8N271 834 aa29.51■■■□□ 2.31
CKLF-205ENST00000417030 IGSF1Q8N6C5 1336 aa29.5■■■□□ 2.31
CKLF-205ENST00000417030 PCDH11XQ9BZA7 1347 aa29.5■■■□□ 2.31
CKLF-205ENST00000417030 PCDH11YQ9BZA8 1340 aa29.5■■■□□ 2.31
CKLF-205ENST00000417030 IL13P35225 146 aa29.49■■■□□ 2.31
CKLF-205ENST00000417030 TXNRD1Q16881 649 aa29.49■■■□□ 2.31
CKLF-205ENST00000417030 SPG7Q9UQ90 795 aa29.49■■■□□ 2.31
CKLF-205ENST00000417030 COL3A1P02461 1466 aaPredicted RBP29.48■■■□□ 2.31
CKLF-205ENST00000417030 PRIM1P49642 420 aaKnown RBP29.48■■■□□ 2.31
CKLF-205ENST00000417030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.48■■■□□ 2.31
CKLF-205ENST00000417030 KAT6BQ8WYB5 2073 aa29.48■■■□□ 2.31
CKLF-205ENST00000417030 RALBP1Q15311 655 aa29.47■■■□□ 2.31
CKLF-205ENST00000417030 SYTL4Q96C24 671 aaPredicted RBP29.47■■■□□ 2.31
CKLF-205ENST00000417030 NUP188Q5SRE5 1749 aa29.47■■■□□ 2.31
CKLF-205ENST00000417030 SHANK3Q9BYB0 1731 aa29.45■■■□□ 2.31
CKLF-205ENST00000417030 DIAPH1O60610 1272 aaKnown RBP29.45■■■□□ 2.31
CKLF-205ENST00000417030 CYP27B1O15528 508 aa29.43■■■□□ 2.3
CKLF-205ENST00000417030 CFAP53Q96M91 514 aa29.43■■■□□ 2.3
CKLF-205ENST00000417030 PKD1L3Q7Z443 1732 aa29.42■■■□□ 2.3
CKLF-205ENST00000417030 PLEKHG2Q9H7P9 1386 aa29.41■■■□□ 2.3
CKLF-205ENST00000417030 BTAF1O14981 1849 aa29.41■■■□□ 2.3
CKLF-205ENST00000417030 KDRP35968 1356 aa29.39■■■□□ 2.3
CKLF-205ENST00000417030 NKX1-1Q15270 411 aaPredicted RBP29.39■■■□□ 2.3
CKLF-205ENST00000417030 SULT6B1Q6IMI4 303 aa29.37■■■□□ 2.29
CKLF-205ENST00000417030 IFNL2Q8IZJ0 200 aa29.37■■■□□ 2.29
CKLF-205ENST00000417030 STK32BQ9NY57 414 aa29.37■■■□□ 2.29
CKLF-205ENST00000417030 SRCAPQ6ZRS2 3230 aa29.37■■■□□ 2.29
CKLF-205ENST00000417030 SLC27A3Q5K4L6 730 aa29.36■■■□□ 2.29
CKLF-205ENST00000417030 AEBP1Q8IUX7 1158 aa29.36■■■□□ 2.29
CKLF-205ENST00000417030 PRKRIP1Q9H875 184 aaPredicted RBP29.36■■■□□ 2.29
CKLF-205ENST00000417030 DOT1LQ8TEK3 1739 aa29.36■■■□□ 2.29
CKLF-205ENST00000417030 PLEKHO1Q53GL0 409 aaPredicted RBP29.35■■■□□ 2.29
CKLF-205ENST00000417030 ANO8Q9HCE9 1232 aaPredicted RBP29.35■■■□□ 2.29
CKLF-205ENST00000417030 MYBBP1AQ9BQG0 1328 aaKnown RBP29.35■■■□□ 2.29
CKLF-205ENST00000417030 PHKG2P15735 406 aa29.33■■■□□ 2.29
CKLF-205ENST00000417030 SLC15A2Q16348 729 aa29.33■■■□□ 2.29
CKLF-205ENST00000417030 AMOTQ4VCS5 1084 aa29.33■■■□□ 2.29
CKLF-205ENST00000417030 MPRIPQ6WCQ1 1025 aa29.32■■■□□ 2.28
CKLF-205ENST00000417030 U2SURPO15042 1029 aaKnown RBP29.31■■■□□ 2.28
CKLF-205ENST00000417030 LRRC4BQ9NT99 713 aa29.31■■■□□ 2.28
CKLF-205ENST00000417030 NUDCQ9Y266 331 aa29.31■■■□□ 2.28
CKLF-205ENST00000417030 HMOX1P09601 288 aa29.3■■■□□ 2.28
CKLF-205ENST00000417030 LRP5O75197 1615 aa29.29■■■□□ 2.28
CKLF-205ENST00000417030 HSP90AB1P08238 724 aaKnown RBP29.28■■■□□ 2.28
CKLF-205ENST00000417030 HMGB2P26583 209 aaKnown RBP29.27■■■□□ 2.28
CKLF-205ENST00000417030 SMARCC1Q92922 1105 aaPredicted RBP29.26■■■□□ 2.27
CKLF-205ENST00000417030 PIGBQ92521 554 aa29.25■■■□□ 2.27
CKLF-205ENST00000417030 CCNL1Q9UK58 526 aaPredicted RBP29.25■■■□□ 2.27
CKLF-205ENST00000417030 ZNF530Q6P9A1 599 aaPredicted RBP29.24■■■□□ 2.27
CKLF-205ENST00000417030 DCAF5Q96JK2 942 aa29.24■■■□□ 2.27
CKLF-205ENST00000417030 SPON1Q9HCB6 807 aa29.24■■■□□ 2.27
CKLF-205ENST00000417030 TMOD3Q9NYL9 352 aa29.24■■■□□ 2.27
CKLF-205ENST00000417030 U2AF1L5P0DN76 240 aaPredicted RBP29.22■■■□□ 2.27
CKLF-205ENST00000417030 U2AF1Q01081 240 aaKnown RBP eCLIP29.22■■■□□ 2.27
CKLF-205ENST00000417030 C1orf141Q5JVX7 400 aa29.22■■■□□ 2.27
CKLF-205ENST00000417030 LY75O60449 1722 aa29.21■■■□□ 2.27
CKLF-205ENST00000417030 ERVV-2B6SEH9 535 aa29.21■■■□□ 2.27
CKLF-205ENST00000417030 KCNQ4P56696 695 aa29.21■■■□□ 2.27
CKLF-205ENST00000417030 AKT1S1Q96B36 256 aa29.21■■■□□ 2.27
CKLF-205ENST00000417030 PALLDQ8WX93 1383 aa29.2■■■□□ 2.26
CKLF-205ENST00000417030 ITGB4P16144 1822 aa29.2■■■□□ 2.26
CKLF-205ENST00000417030 TOGARAM1Q9Y4F4 1720 aa29.2■■■□□ 2.26
CKLF-205ENST00000417030 PAPPAQ13219 1627 aa29.2■■■□□ 2.26
CKLF-205ENST00000417030 ZNF827Q17R98 1081 aa29.19■■■□□ 2.26
CKLF-205ENST00000417030 PDGFDQ9GZP0 370 aaPredicted RBP29.19■■■□□ 2.26
CKLF-205ENST00000417030 RSPH6AQ9H0K4 717 aa29.19■■■□□ 2.26
CKLF-205ENST00000417030 ANP32CO43423 234 aa29.18■■■□□ 2.26
CKLF-205ENST00000417030 FCHSD2O94868 740 aa29.17■■■□□ 2.26
CKLF-205ENST00000417030 TFCP2L1Q9NZI6 479 aa29.16■■■□□ 2.26
CKLF-205ENST00000417030 PRKAR2BP31323 418 aa29.15■■■□□ 2.26
CKLF-205ENST00000417030 CASZ1Q86V15 1759 aa29.14■■■□□ 2.26
CKLF-205ENST00000417030 ZBTB7AO95365 584 aa29.14■■■□□ 2.26
CKLF-205ENST00000417030 AKAP4Q5JQC9 854 aa29.14■■■□□ 2.26
CKLF-205ENST00000417030 CABP4P57796 275 aa29.13■■■□□ 2.25
CKLF-205ENST00000417030 MTHFSDQ2M296 383 aaKnown RBP29.13■■■□□ 2.25
CKLF-205ENST00000417030 ASAP1Q9ULH1 1129 aa29.13■■■□□ 2.25
CKLF-205ENST00000417030 MTFR1LQ9H019 292 aa29.12■■■□□ 2.25
CKLF-205ENST00000417030 ATG3Q9NT62 314 aa29.11■■■□□ 2.25
CKLF-205ENST00000417030 PPP1R1BQ9UD71 204 aaPredicted RBP29.11■■■□□ 2.25
CKLF-205ENST00000417030 LOC102724428A0A0B4J2F2 783 aa29.1■■■□□ 2.25
CKLF-205ENST00000417030 SIK1P57059 783 aa29.1■■■□□ 2.25
CKLF-205ENST00000417030 SLC16A10Q8TF71 515 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms