RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 ZNF784Q8NCA9 323 aaPredicted RBP8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 EMILIN1Q9Y6C2 1016 aa8.24□□□□□ -1.09
TTC39DP-201ENST00000416781 SCTRP47872 440 aa8.23□□□□□ -1.09
TTC39DP-201ENST00000416781 CC2D2BQ6DHV5 1058 aa8.23□□□□□ -1.09
TTC39DP-201ENST00000416781 TRIM50Q86XT4 487 aa8.23□□□□□ -1.09
TTC39DP-201ENST00000416781 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
TTC39DP-201ENST00000416781 ERVK-9P63128 1117 aa8.22□□□□□ -1.09
TTC39DP-201ENST00000416781 ACIN1Q9UKV3 1341 aaKnown RBP8.22□□□□□ -1.09
TTC39DP-201ENST00000416781 SMPD1P17405 629 aa8.21□□□□□ -1.09
TTC39DP-201ENST00000416781 RASA1P20936 1047 aa8.21□□□□□ -1.09
TTC39DP-201ENST00000416781 ATP1A2P50993 1020 aa8.21□□□□□ -1.09
TTC39DP-201ENST00000416781 GTF2IP78347 998 aa8.21□□□□□ -1.09
TTC39DP-201ENST00000416781 LARP1Q6PKG0 1096 aaKnown RBP8.21□□□□□ -1.09
TTC39DP-201ENST00000416781 UBE2Q2Q8WVN8 375 aa8.21□□□□□ -1.09
TTC39DP-201ENST00000416781 USP17L15C9J2P7 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L10C9JJH3 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L13C9JLJ4 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L12C9JPN9 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L11C9JVI0 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L21D6R901 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L18D6R9N7 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L22D6RA61 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L17D6RBQ6 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L19D6RCP7 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L20D6RJB6 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 ATG7O95352 703 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 PSME1Q06323 249 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 USP17L24Q0WX57 530 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 OGFOD1Q8N543 542 aa8.21□□□□□ -1.1
TTC39DP-201ENST00000416781 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
TTC39DP-201ENST00000416781 WDR4P57081 412 aaKnown RBP8.2□□□□□ -1.1
TTC39DP-201ENST00000416781 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
TTC39DP-201ENST00000416781 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
TTC39DP-201ENST00000416781 CHMP4AQ9BY43 222 aa8.2□□□□□ -1.1
TTC39DP-201ENST00000416781 DNAAF2Q9NVR5 837 aaKnown RBP8.2□□□□□ -1.1
TTC39DP-201ENST00000416781 LILRA1O75019 489 aa8.19□□□□□ -1.1
TTC39DP-201ENST00000416781 CLDN10P78369 228 aa8.19□□□□□ -1.1
TTC39DP-201ENST00000416781 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
TTC39DP-201ENST00000416781 CDK11AQ9UQ88 783 aaPredicted RBP8.19□□□□□ -1.1
TTC39DP-201ENST00000416781 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 ITPKCQ96DU7 683 aa8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 OSBPL3Q9H4L5 887 aa8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 PTK7Q13308 1070 aa8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 HPS1Q92902 700 aa8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 NOVA2Q9UNW9 492 aaKnown RBP8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 KIAA1024Q9UPX6 916 aa8.18□□□□□ -1.1
TTC39DP-201ENST00000416781 SHROOM4Q9ULL8 1493 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 LOC100996750A0A140TA64 210 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 FAM187AA6NFU0 413 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 TIMP2P16035 220 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 CYP2U1Q7Z449 544 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 LARGE2Q8N3Y3 721 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 KRTAP4-6Q9BYQ5 205 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 RBM19Q9Y4C8 960 aaKnown RBP8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 PCDHGA11Q9Y5H2 935 aa8.17□□□□□ -1.1
TTC39DP-201ENST00000416781 CDK11BP21127 795 aaKnown RBP8.16□□□□□ -1.1
TTC39DP-201ENST00000416781 CBLBQ13191 982 aa8.16□□□□□ -1.1
TTC39DP-201ENST00000416781 ELOAQ14241 798 aaKnown RBP8.16□□□□□ -1.1
TTC39DP-201ENST00000416781 TPCN2Q8NHX9 752 aa8.16□□□□□ -1.1
TTC39DP-201ENST00000416781 KLF16Q9BXK1 252 aaPredicted RBP8.16□□□□□ -1.1
TTC39DP-201ENST00000416781 ZMIZ1Q9ULJ6 1067 aa8.16□□□□□ -1.1
TTC39DP-201ENST00000416781 ADD1P35611 737 aaKnown RBP8.15□□□□□ -1.1
TTC39DP-201ENST00000416781 CCDC102BQ68D86 513 aa8.15□□□□□ -1.1
TTC39DP-201ENST00000416781 ANKMY2Q8IV38 441 aa8.15□□□□□ -1.1
TTC39DP-201ENST00000416781 SIX5Q8N196 739 aa8.15□□□□□ -1.1
TTC39DP-201ENST00000416781 ADH1AP07327 375 aa8.14□□□□□ -1.11
TTC39DP-201ENST00000416781 DPYDQ12882 1025 aa8.14□□□□□ -1.11
TTC39DP-201ENST00000416781 STK32AQ8WU08 396 aa8.14□□□□□ -1.11
TTC39DP-201ENST00000416781 ZBTB7BO15156 539 aaPredicted RBP8.14□□□□□ -1.11
TTC39DP-201ENST00000416781 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
TTC39DP-201ENST00000416781 USTQ9Y2C2 406 aa8.13□□□□□ -1.11
TTC39DP-201ENST00000416781 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
TTC39DP-201ENST00000416781 Q6ZVU0 165 aa8.12□□□□□ -1.11
TTC39DP-201ENST00000416781 FAM9AQ8IZU1 332 aaPredicted RBP8.12□□□□□ -1.11
TTC39DP-201ENST00000416781 CAPN5O15484 640 aaPredicted RBP8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 STAU1O95793 577 aaKnown RBP8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 GNRH1P01148 92 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 HMGB1P09429 215 aaKnown RBP8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 GDF10P55107 478 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 SEC13P55735 322 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 PDE4CQ08493 712 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 ARHGEF10LQ9HCE6 1279 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 RAB6BQ9NRW1 208 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 SFI1A8K8P3 1242 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 DKK1O94907 266 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 SCNN1DP51172 638 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 RELBQ01201 579 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 AGBL1Q96MI9 1066 aa8.11□□□□□ -1.11
TTC39DP-201ENST00000416781 BRD2P25440 801 aaKnown RBP8.1□□□□□ -1.11
TTC39DP-201ENST00000416781 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
TTC39DP-201ENST00000416781 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.1□□□□□ -1.11
TTC39DP-201ENST00000416781 ETNK1Q9HBU6 452 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms