RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
DEPDC4-203ENST00000416321 IL16Q14005 1332 aa13.24□□□□□ -0.29
DEPDC4-203ENST00000416321 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
DEPDC4-203ENST00000416321 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
DEPDC4-203ENST00000416321 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
DEPDC4-203ENST00000416321 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
DEPDC4-203ENST00000416321 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
DEPDC4-203ENST00000416321 DLG5Q8TDM6 1919 aa13.23□□□□□ -0.29
DEPDC4-203ENST00000416321 JCADQ9P266 1359 aa13.23□□□□□ -0.29
DEPDC4-203ENST00000416321 WDR17Q8IZU2 1322 aa13.23□□□□□ -0.29
DEPDC4-203ENST00000416321 MTHFSDQ2M296 383 aaKnown RBP13.23□□□□□ -0.29
DEPDC4-203ENST00000416321 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
DEPDC4-203ENST00000416321 LMO7Q8WWI1 1683 aa13.23□□□□□ -0.29
DEPDC4-203ENST00000416321 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
DEPDC4-203ENST00000416321 NUTM2BA6NNL0 878 aaPredicted RBP13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 NUTM2EB1AL46 878 aaPredicted RBP13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 NUTM2AQ8IVF1 878 aaPredicted RBP13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
DEPDC4-203ENST00000416321 FAM83GA6ND36 823 aa13.21□□□□□ -0.29
DEPDC4-203ENST00000416321 ADAMTS2O95450 1211 aa13.21□□□□□ -0.29
DEPDC4-203ENST00000416321 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
DEPDC4-203ENST00000416321 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
DEPDC4-203ENST00000416321 MAP3K5Q99683 1374 aa13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 GNAI1P63096 354 aa13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 POLA2Q14181 598 aa13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 BTG4Q9NY30 223 aa13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
DEPDC4-203ENST00000416321 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
DEPDC4-203ENST00000416321 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
DEPDC4-203ENST00000416321 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
DEPDC4-203ENST00000416321 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
DEPDC4-203ENST00000416321 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
DEPDC4-203ENST00000416321 CARD10Q9BWT7 1032 aa13.18□□□□□ -0.3
DEPDC4-203ENST00000416321 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
DEPDC4-203ENST00000416321 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
DEPDC4-203ENST00000416321 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
DEPDC4-203ENST00000416321 CRB1P82279 1406 aa13.17□□□□□ -0.3
DEPDC4-203ENST00000416321 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
DEPDC4-203ENST00000416321 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
DEPDC4-203ENST00000416321 MCM10Q7L590 875 aa13.17□□□□□ -0.3
DEPDC4-203ENST00000416321 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
DEPDC4-203ENST00000416321 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
DEPDC4-203ENST00000416321 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
DEPDC4-203ENST00000416321 TSR2Q969E8 191 aaKnown RBP13.16□□□□□ -0.3
DEPDC4-203ENST00000416321 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
DEPDC4-203ENST00000416321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
DEPDC4-203ENST00000416321 MEGF6O75095 1541 aa13.15□□□□□ -0.3
DEPDC4-203ENST00000416321 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
DEPDC4-203ENST00000416321 IL2RBP14784 551 aa13.15□□□□□ -0.3
DEPDC4-203ENST00000416321 HSPA1LP34931 641 aa13.15□□□□□ -0.3
DEPDC4-203ENST00000416321 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.15□□□□□ -0.3
DEPDC4-203ENST00000416321 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
DEPDC4-203ENST00000416321 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
DEPDC4-203ENST00000416321 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 TEFQ10587 303 aa13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 TSPYL4Q9UJ04 414 aa13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 NWD2Q9ULI1 1742 aa13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
DEPDC4-203ENST00000416321 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 FKBP8Q14318 412 aa13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
DEPDC4-203ENST00000416321 NRAPQ86VF7 1730 aa13.11□□□□□ -0.31
DEPDC4-203ENST00000416321 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
DEPDC4-203ENST00000416321 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
DEPDC4-203ENST00000416321 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
DEPDC4-203ENST00000416321 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
DEPDC4-203ENST00000416321 CHL1O00533 1208 aa13.1□□□□□ -0.31
DEPDC4-203ENST00000416321 PHKG2P15735 406 aa13.1□□□□□ -0.31
DEPDC4-203ENST00000416321 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
DEPDC4-203ENST00000416321 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
DEPDC4-203ENST00000416321 ZNF428Q96B54 188 aa13.1□□□□□ -0.31
DEPDC4-203ENST00000416321 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
DEPDC4-203ENST00000416321 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
DEPDC4-203ENST00000416321 SLIT2O94813 1529 aa13.09□□□□□ -0.31
DEPDC4-203ENST00000416321 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
DEPDC4-203ENST00000416321 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
DEPDC4-203ENST00000416321 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
DEPDC4-203ENST00000416321 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
DEPDC4-203ENST00000416321 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
DEPDC4-203ENST00000416321 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
DEPDC4-203ENST00000416321 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
DEPDC4-203ENST00000416321 LGR6Q9HBX8 967 aa13.08□□□□□ -0.32
DEPDC4-203ENST00000416321 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms