RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 DISP2A7MBM2 1401 aa19.22■□□□□ 0.67
SGCE-202ENST00000415788 TATP17735 454 aaPredicted RBP19.22■□□□□ 0.67
SGCE-202ENST00000415788 RGPD2P0DJD1 1756 aa19.21■□□□□ 0.67
SGCE-202ENST00000415788 ONECUT3O60422 494 aaPredicted RBP19.21■□□□□ 0.67
SGCE-202ENST00000415788 POTEAQ6S8J7 498 aa19.21■□□□□ 0.67
SGCE-202ENST00000415788 FAM98CQ17RN3 349 aaKnown RBP19.2■□□□□ 0.66
SGCE-202ENST00000415788 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
SGCE-202ENST00000415788 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
SGCE-202ENST00000415788 MEGF6O75095 1541 aa19.19■□□□□ 0.66
SGCE-202ENST00000415788 OVOS2A0A0G2JMS6 1433 aa19.19■□□□□ 0.66
SGCE-202ENST00000415788 NEFMP07197 916 aa19.19■□□□□ 0.66
SGCE-202ENST00000415788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.19■□□□□ 0.662e-6■□□□□ 8.1
SGCE-202ENST00000415788 PRKAR2BP31323 418 aa19.18■□□□□ 0.66
SGCE-202ENST00000415788 AMOTQ4VCS5 1084 aa19.17■□□□□ 0.66
SGCE-202ENST00000415788 PARP4Q9UKK3 1724 aaKnown RBP19.16■□□□□ 0.66
SGCE-202ENST00000415788 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
SGCE-202ENST00000415788 THSD7AQ9UPZ6 1657 aa19.16■□□□□ 0.66
SGCE-202ENST00000415788 A0A0G2JS52 829 aa19.16■□□□□ 0.66
SGCE-202ENST00000415788 PLEKHO1Q53GL0 409 aaPredicted RBP19.16■□□□□ 0.66
SGCE-202ENST00000415788 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
SGCE-202ENST00000415788 EXOC5O00471 708 aa19.15■□□□□ 0.66
SGCE-202ENST00000415788 DDB1Q16531 1140 aa19.15■□□□□ 0.66
SGCE-202ENST00000415788 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
SGCE-202ENST00000415788 PLEKHF1Q96S99 279 aa19.15■□□□□ 0.66
SGCE-202ENST00000415788 TNS2Q63HR2 1409 aa19.15■□□□□ 0.66
SGCE-202ENST00000415788 MAPK8IP3Q9UPT6 1336 aa19.15■□□□□ 0.66
SGCE-202ENST00000415788 SEPT12Q8IYM1 358 aa19.14■□□□□ 0.65
SGCE-202ENST00000415788 ZCRB1Q8TBF4 217 aaKnown RBP19.14■□□□□ 0.65
SGCE-202ENST00000415788 RBM19Q9Y4C8 960 aaKnown RBP19.14■□□□□ 0.65
SGCE-202ENST00000415788 RUNDC1Q96C34 613 aa19.14■□□□□ 0.65
SGCE-202ENST00000415788 PCDH11XQ9BZA7 1347 aa19.13■□□□□ 0.65
SGCE-202ENST00000415788 PCDH11YQ9BZA8 1340 aa19.13■□□□□ 0.65
SGCE-202ENST00000415788 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
SGCE-202ENST00000415788 LRRC37A3O60309 1634 aa19.11■□□□□ 0.65
SGCE-202ENST00000415788 PHACTR3Q96KR7 559 aa19.11■□□□□ 0.65
SGCE-202ENST00000415788 PKD1L3Q7Z443 1732 aa19.1■□□□□ 0.65
SGCE-202ENST00000415788 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
SGCE-202ENST00000415788 RGS12O14924 1447 aa19.1■□□□□ 0.65
SGCE-202ENST00000415788 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
SGCE-202ENST00000415788 MTHFSDQ2M296 383 aaKnown RBP19.09■□□□□ 0.65
SGCE-202ENST00000415788 C1orf141Q5JVX7 400 aa19.09■□□□□ 0.65
SGCE-202ENST00000415788 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
SGCE-202ENST00000415788 IFNL2Q8IZJ0 200 aa19.08■□□□□ 0.65
SGCE-202ENST00000415788 BCL11AQ9H165 835 aa19.08■□□□□ 0.65
SGCE-202ENST00000415788 CYP27B1O15528 508 aa19.07■□□□□ 0.64
SGCE-202ENST00000415788 HSP90AB1P08238 724 aaKnown RBP19.07■□□□□ 0.64
SGCE-202ENST00000415788 NFE2L2Q16236 605 aa19.07■□□□□ 0.64
SGCE-202ENST00000415788 AKAP4Q5JQC9 854 aa19.07■□□□□ 0.64
SGCE-202ENST00000415788 KRT27Q7Z3Y8 459 aa19.07■□□□□ 0.64
SGCE-202ENST00000415788 DDX54Q8TDD1 881 aaKnown RBP19.07■□□□□ 0.64
SGCE-202ENST00000415788 PHKG2P15735 406 aa19.06■□□□□ 0.64
SGCE-202ENST00000415788 MAP3K5Q99683 1374 aa19.04■□□□□ 0.64
SGCE-202ENST00000415788 APAF1O14727 1248 aa19.04■□□□□ 0.64
SGCE-202ENST00000415788 TMPOP42166 694 aaKnown RBP19.04■□□□□ 0.64
SGCE-202ENST00000415788 NKX1-1Q15270 411 aaPredicted RBP19.04■□□□□ 0.64
SGCE-202ENST00000415788 NGEFQ8N5V2 710 aa19.04■□□□□ 0.64
SGCE-202ENST00000415788 MARCH10Q8NA82 808 aaPredicted RBP19.04■□□□□ 0.64
SGCE-202ENST00000415788 GNAT3A8MTJ3 354 aa19.03■□□□□ 0.64
SGCE-202ENST00000415788 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
SGCE-202ENST00000415788 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
SGCE-202ENST00000415788 BCL9O00512 1426 aa19.03■□□□□ 0.64
SGCE-202ENST00000415788 SHANK3Q9BYB0 1731 aa19.03■□□□□ 0.64
SGCE-202ENST00000415788 LMOD3Q0VAK6 560 aa19.03■□□□□ 0.64
SGCE-202ENST00000415788 DCAF5Q96JK2 942 aa19.03■□□□□ 0.64
SGCE-202ENST00000415788 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
SGCE-202ENST00000415788 RIPK4P57078 832 aa19.01■□□□□ 0.63
SGCE-202ENST00000415788 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
SGCE-202ENST00000415788 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
SGCE-202ENST00000415788 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
SGCE-202ENST00000415788 RRP7AQ9Y3A4 280 aaKnown RBP18.99■□□□□ 0.63
SGCE-202ENST00000415788 BRWD3Q6RI45 1802 aa18.98■□□□□ 0.63
SGCE-202ENST00000415788 NEUROD2Q15784 382 aa18.98■□□□□ 0.63
SGCE-202ENST00000415788 CCDC27Q2M243 656 aa18.98■□□□□ 0.63
SGCE-202ENST00000415788 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
SGCE-202ENST00000415788 KDM6AO15550 1401 aaPredicted RBP18.97■□□□□ 0.63
SGCE-202ENST00000415788 ERVV-2B6SEH9 535 aa18.97■□□□□ 0.63
SGCE-202ENST00000415788 RNMTO43148 476 aaKnown RBP18.97■□□□□ 0.63
SGCE-202ENST00000415788 CEMIPQ8WUJ3 1361 aa18.96■□□□□ 0.63
SGCE-202ENST00000415788 FAM182BQ5T319 152 aa18.95■□□□□ 0.62
SGCE-202ENST00000415788 IL17REQ8NFR9 667 aa18.95■□□□□ 0.62
SGCE-202ENST00000415788 TRIM35Q9UPQ4 493 aa18.94■□□□□ 0.62
SGCE-202ENST00000415788 ADAMTS7Q9UKP4 1686 aa18.94■□□□□ 0.62
SGCE-202ENST00000415788 MCM10Q7L590 875 aa18.94■□□□□ 0.62
SGCE-202ENST00000415788 LGR6Q9HBX8 967 aa18.94■□□□□ 0.62
SGCE-202ENST00000415788 CALD1Q05682 793 aaKnown RBP18.93■□□□□ 0.62
SGCE-202ENST00000415788 MRC1P22897 1456 aa18.93■□□□□ 0.62
SGCE-202ENST00000415788 CABP4P57796 275 aa18.92■□□□□ 0.62
SGCE-202ENST00000415788 TEFQ10587 303 aa18.92■□□□□ 0.62
SGCE-202ENST00000415788 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
SGCE-202ENST00000415788 WWC1Q8IX03 1113 aa18.92■□□□□ 0.62
SGCE-202ENST00000415788 SLC52A2Q9HAB3 445 aa18.92■□□□□ 0.62
SGCE-202ENST00000415788 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
SGCE-202ENST00000415788 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
SGCE-202ENST00000415788 HNRNPUQ00839 825 aaKnown RBP eCLIP18.9■□□□□ 0.62
SGCE-202ENST00000415788 ACSBG1Q96GR2 724 aa18.9■□□□□ 0.62
SGCE-202ENST00000415788 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
SGCE-202ENST00000415788 SCN11AQ9UI33 1791 aa18.9■□□□□ 0.62
SGCE-202ENST00000415788 SYTL4Q96C24 671 aaPredicted RBP18.9■□□□□ 0.62
SGCE-202ENST00000415788 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
SGCE-202ENST00000415788 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms