RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 STK32BQ9NY57 414 aa17.42■□□□□ 0.38
NCKIPSD-203ENST00000415281 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
NCKIPSD-203ENST00000415281 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
NCKIPSD-203ENST00000415281 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
NCKIPSD-203ENST00000415281 TUBGCP6Q96RT7 1819 aa17.41■□□□□ 0.38
NCKIPSD-203ENST00000415281 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
NCKIPSD-203ENST00000415281 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-203ENST00000415281 KCNQ4P56696 695 aa17.4■□□□□ 0.38
NCKIPSD-203ENST00000415281 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-203ENST00000415281 QSER1Q2KHR3 1735 aa17.39■□□□□ 0.37
NCKIPSD-203ENST00000415281 INSRP06213 1382 aa17.39■□□□□ 0.37
NCKIPSD-203ENST00000415281 PPP1R1BQ9UD71 204 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-203ENST00000415281 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
NCKIPSD-203ENST00000415281 EMILIN1Q9Y6C2 1016 aa17.37■□□□□ 0.37
NCKIPSD-203ENST00000415281 MAP2P11137 1827 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-203ENST00000415281 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
NCKIPSD-203ENST00000415281 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
NCKIPSD-203ENST00000415281 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
NCKIPSD-203ENST00000415281 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
NCKIPSD-203ENST00000415281 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
NCKIPSD-203ENST00000415281 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
NCKIPSD-203ENST00000415281 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
NCKIPSD-203ENST00000415281 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
NCKIPSD-203ENST00000415281 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
NCKIPSD-203ENST00000415281 FLT4P35916 1363 aa17.33■□□□□ 0.36
NCKIPSD-203ENST00000415281 CYP27B1O15528 508 aa17.33■□□□□ 0.36
NCKIPSD-203ENST00000415281 SLC27A3Q5K4L6 730 aa17.33■□□□□ 0.36
NCKIPSD-203ENST00000415281 FHDC1Q9C0D6 1143 aaPredicted RBP17.33■□□□□ 0.36
NCKIPSD-203ENST00000415281 ITGB4P16144 1822 aa17.33■□□□□ 0.36
NCKIPSD-203ENST00000415281 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
NCKIPSD-203ENST00000415281 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
NCKIPSD-203ENST00000415281 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-203ENST00000415281 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
NCKIPSD-203ENST00000415281 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-203ENST00000415281 WASHC2AQ641Q2 1341 aa17.3■□□□□ 0.36
NCKIPSD-203ENST00000415281 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
NCKIPSD-203ENST00000415281 TAF1LQ8IZX4 1826 aa17.3■□□□□ 0.36
NCKIPSD-203ENST00000415281 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-203ENST00000415281 YY1P25490 414 aa17.29■□□□□ 0.36
NCKIPSD-203ENST00000415281 ARXQ96QS3 562 aa17.29■□□□□ 0.36
NCKIPSD-203ENST00000415281 RAPGEF4Q8WZA2 1011 aa17.28■□□□□ 0.36
NCKIPSD-203ENST00000415281 EYA1Q99502 592 aa17.28■□□□□ 0.36
NCKIPSD-203ENST00000415281 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-203ENST00000415281 SMG6Q86US8 1419 aaKnown RBP17.27■□□□□ 0.35
NCKIPSD-203ENST00000415281 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
NCKIPSD-203ENST00000415281 C5P01031 1676 aa17.26■□□□□ 0.35
NCKIPSD-203ENST00000415281 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
NCKIPSD-203ENST00000415281 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
NCKIPSD-203ENST00000415281 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
NCKIPSD-203ENST00000415281 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-203ENST00000415281 CCNL1Q9UK58 526 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-203ENST00000415281 PCDH11XQ9BZA7 1347 aa17.24■□□□□ 0.35
NCKIPSD-203ENST00000415281 PCDH11YQ9BZA8 1340 aa17.24■□□□□ 0.35
NCKIPSD-203ENST00000415281 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
NCKIPSD-203ENST00000415281 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
NCKIPSD-203ENST00000415281 MPRIPQ6WCQ1 1025 aa17.23■□□□□ 0.35
NCKIPSD-203ENST00000415281 PIGBQ92521 554 aa17.23■□□□□ 0.35
NCKIPSD-203ENST00000415281 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-203ENST00000415281 PANK3Q9H999 370 aa17.22■□□□□ 0.35
NCKIPSD-203ENST00000415281 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.35
NCKIPSD-203ENST00000415281 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
NCKIPSD-203ENST00000415281 CHD4Q14839 1912 aa17.2■□□□□ 0.34
NCKIPSD-203ENST00000415281 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
NCKIPSD-203ENST00000415281 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-203ENST00000415281 NLGN2Q8NFZ4 835 aa17.2■□□□□ 0.34
NCKIPSD-203ENST00000415281 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
NCKIPSD-203ENST00000415281 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
NCKIPSD-203ENST00000415281 C4BP0C0L5 1744 aa17.19■□□□□ 0.34
NCKIPSD-203ENST00000415281 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.19■□□□□ 0.34
NCKIPSD-203ENST00000415281 PHKG2P15735 406 aa17.18■□□□□ 0.34
NCKIPSD-203ENST00000415281 IGSF1Q8N6C5 1336 aa17.17■□□□□ 0.34
NCKIPSD-203ENST00000415281 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
NCKIPSD-203ENST00000415281 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
NCKIPSD-203ENST00000415281 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
NCKIPSD-203ENST00000415281 ITPK1Q13572 414 aa17.15■□□□□ 0.34
NCKIPSD-203ENST00000415281 ZNF784Q8NCA9 323 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-203ENST00000415281 LINC00116Q8NCU8 138 aa17.15■□□□□ 0.34
NCKIPSD-203ENST00000415281 SLC4A9Q96Q91 983 aa17.15■□□□□ 0.34
NCKIPSD-203ENST00000415281 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
NCKIPSD-203ENST00000415281 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
NCKIPSD-203ENST00000415281 POLD1P28340 1107 aa17.13■□□□□ 0.33
NCKIPSD-203ENST00000415281 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
NCKIPSD-203ENST00000415281 LOC102724428A0A0B4J2F2 783 aa17.12■□□□□ 0.33
NCKIPSD-203ENST00000415281 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
NCKIPSD-203ENST00000415281 SIK1P57059 783 aa17.12■□□□□ 0.33
NCKIPSD-203ENST00000415281 AEBP1Q8IUX7 1158 aa17.12■□□□□ 0.33
NCKIPSD-203ENST00000415281 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
NCKIPSD-203ENST00000415281 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
NCKIPSD-203ENST00000415281 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
NCKIPSD-203ENST00000415281 PER1O15534 1290 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-203ENST00000415281 MSH5O43196 834 aa17.1■□□□□ 0.33
NCKIPSD-203ENST00000415281 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
NCKIPSD-203ENST00000415281 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
NCKIPSD-203ENST00000415281 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
NCKIPSD-203ENST00000415281 IL13P35225 146 aa17.09■□□□□ 0.33
NCKIPSD-203ENST00000415281 TMOD3Q9NYL9 352 aa17.09■□□□□ 0.33
NCKIPSD-203ENST00000415281 KDRP35968 1356 aa17.09■□□□□ 0.33
NCKIPSD-203ENST00000415281 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-203ENST00000415281 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.32
NCKIPSD-203ENST00000415281 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms