RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
CNOT4-204ENST00000414802 TATP17735 454 aaPredicted RBP17.39■□□□□ 0.37
CNOT4-204ENST00000414802 FAM98CQ17RN3 349 aaKnown RBP17.39■□□□□ 0.37
CNOT4-204ENST00000414802 ZNF772Q68DY9 489 aaPredicted RBP17.39■□□□□ 0.37
CNOT4-204ENST00000414802 RGS17Q9UGC6 210 aaPredicted RBP17.39■□□□□ 0.37
CNOT4-204ENST00000414802 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
CNOT4-204ENST00000414802 IL2RBP14784 551 aa17.39■□□□□ 0.37
CNOT4-204ENST00000414802 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
CNOT4-204ENST00000414802 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.37
CNOT4-204ENST00000414802 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
CNOT4-204ENST00000414802 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
CNOT4-204ENST00000414802 SCN11AQ9UI33 1791 aa17.37■□□□□ 0.37
CNOT4-204ENST00000414802 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
CNOT4-204ENST00000414802 A0A0G2JS52 829 aa17.36■□□□□ 0.37
CNOT4-204ENST00000414802 APAF1O14727 1248 aa17.36■□□□□ 0.37
CNOT4-204ENST00000414802 MYT1Q01538 1121 aa17.36■□□□□ 0.37
CNOT4-204ENST00000414802 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
CNOT4-204ENST00000414802 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
CNOT4-204ENST00000414802 NEFMP07197 916 aa17.35■□□□□ 0.37
CNOT4-204ENST00000414802 MTHFSDQ2M296 383 aaKnown RBP17.35■□□□□ 0.37
CNOT4-204ENST00000414802 POTEAQ6S8J7 498 aa17.35■□□□□ 0.37
CNOT4-204ENST00000414802 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
CNOT4-204ENST00000414802 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
CNOT4-204ENST00000414802 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
CNOT4-204ENST00000414802 DOT1LQ8TEK3 1739 aa17.34■□□□□ 0.37
CNOT4-204ENST00000414802 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.37
CNOT4-204ENST00000414802 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.37
CNOT4-204ENST00000414802 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.37
CNOT4-204ENST00000414802 ITGB4P16144 1822 aa17.33■□□□□ 0.36
CNOT4-204ENST00000414802 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
CNOT4-204ENST00000414802 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
CNOT4-204ENST00000414802 HNRNPUQ00839 825 aaKnown RBP eCLIP17.32■□□□□ 0.36
CNOT4-204ENST00000414802 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
CNOT4-204ENST00000414802 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
CNOT4-204ENST00000414802 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
CNOT4-204ENST00000414802 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
CNOT4-204ENST00000414802 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
CNOT4-204ENST00000414802 GAS2L2Q8NHY3 880 aa17.31■□□□□ 0.36
CNOT4-204ENST00000414802 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
CNOT4-204ENST00000414802 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
CNOT4-204ENST00000414802 SIPA1L3O60292 1781 aaPredicted RBP17.31■□□□□ 0.36
CNOT4-204ENST00000414802 SBF2Q86WG5 1849 aa17.3■□□□□ 0.36
CNOT4-204ENST00000414802 DDB1Q16531 1140 aa17.3■□□□□ 0.36
CNOT4-204ENST00000414802 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
CNOT4-204ENST00000414802 RGS12O14924 1447 aa17.3■□□□□ 0.36
CNOT4-204ENST00000414802 CYP27B1O15528 508 aa17.29■□□□□ 0.36
CNOT4-204ENST00000414802 SEPT12Q8IYM1 358 aa17.29■□□□□ 0.36
CNOT4-204ENST00000414802 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
CNOT4-204ENST00000414802 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
CNOT4-204ENST00000414802 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
CNOT4-204ENST00000414802 RXRBP28702 533 aa17.29■□□□□ 0.36
CNOT4-204ENST00000414802 RIPK4P57078 832 aa17.29■□□□□ 0.36
CNOT4-204ENST00000414802 EXOC5O00471 708 aa17.28■□□□□ 0.36
CNOT4-204ENST00000414802 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
CNOT4-204ENST00000414802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.365e-9■■■■■ 32.1
CNOT4-204ENST00000414802 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.36
CNOT4-204ENST00000414802 PHKG2P15735 406 aa17.27■□□□□ 0.36
CNOT4-204ENST00000414802 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
CNOT4-204ENST00000414802 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
CNOT4-204ENST00000414802 AKAP4Q5JQC9 854 aa17.26■□□□□ 0.35
CNOT4-204ENST00000414802 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
CNOT4-204ENST00000414802 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
CNOT4-204ENST00000414802 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
CNOT4-204ENST00000414802 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
CNOT4-204ENST00000414802 MPRIPQ6WCQ1 1025 aa17.25■□□□□ 0.35
CNOT4-204ENST00000414802 MCM10Q7L590 875 aa17.25■□□□□ 0.35
CNOT4-204ENST00000414802 MARCH10Q8NA82 808 aaPredicted RBP17.25■□□□□ 0.35
CNOT4-204ENST00000414802 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
CNOT4-204ENST00000414802 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
CNOT4-204ENST00000414802 PDE3BQ13370 1112 aa17.23■□□□□ 0.35
CNOT4-204ENST00000414802 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
CNOT4-204ENST00000414802 LGR6Q9HBX8 967 aa17.23■□□□□ 0.35
CNOT4-204ENST00000414802 KDM3BQ7LBC6 1761 aa17.22■□□□□ 0.35
CNOT4-204ENST00000414802 EP400Q96L91 3159 aa17.22■□□□□ 0.35
CNOT4-204ENST00000414802 MRC1P22897 1456 aa17.22■□□□□ 0.35
CNOT4-204ENST00000414802 RNMTO43148 476 aaKnown RBP17.21■□□□□ 0.35
CNOT4-204ENST00000414802 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
CNOT4-204ENST00000414802 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
CNOT4-204ENST00000414802 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
CNOT4-204ENST00000414802 BTAF1O14981 1849 aa17.21■□□□□ 0.35
CNOT4-204ENST00000414802 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
CNOT4-204ENST00000414802 CCDC27Q2M243 656 aa17.2■□□□□ 0.34
CNOT4-204ENST00000414802 PAPPAQ13219 1627 aa17.19■□□□□ 0.34
CNOT4-204ENST00000414802 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
CNOT4-204ENST00000414802 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
CNOT4-204ENST00000414802 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
CNOT4-204ENST00000414802 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
CNOT4-204ENST00000414802 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
CNOT4-204ENST00000414802 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
CNOT4-204ENST00000414802 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
CNOT4-204ENST00000414802 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
CNOT4-204ENST00000414802 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
CNOT4-204ENST00000414802 UBR2Q8IWV8 1755 aa17.16■□□□□ 0.34
CNOT4-204ENST00000414802 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
CNOT4-204ENST00000414802 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
CNOT4-204ENST00000414802 TEFQ10587 303 aa17.15■□□□□ 0.34
CNOT4-204ENST00000414802 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
CNOT4-204ENST00000414802 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
CNOT4-204ENST00000414802 SYTL4Q96C24 671 aaPredicted RBP17.14■□□□□ 0.33
CNOT4-204ENST00000414802 CDCA7LQ96GN5 454 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms