RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.72
LRCH3-202ENST00000414675 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
LRCH3-202ENST00000414675 XPCQ01831 940 aaPredicted RBP19.5■□□□□ 0.71
LRCH3-202ENST00000414675 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
LRCH3-202ENST00000414675 KIAA0232Q92628 1395 aa19.5■□□□□ 0.71
LRCH3-202ENST00000414675 GAS2L2Q8NHY3 880 aa19.49■□□□□ 0.71
LRCH3-202ENST00000414675 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
LRCH3-202ENST00000414675 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
LRCH3-202ENST00000414675 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
LRCH3-202ENST00000414675 LRRC37A3O60309 1634 aa19.48■□□□□ 0.71
LRCH3-202ENST00000414675 SMC5Q8IY18 1101 aa19.48■□□□□ 0.71
LRCH3-202ENST00000414675 IP6K1Q92551 441 aa19.48■□□□□ 0.71
LRCH3-202ENST00000414675 HSPA2P54652 639 aa19.47■□□□□ 0.71
LRCH3-202ENST00000414675 C1orf115Q9H7X2 142 aa19.47■□□□□ 0.71
LRCH3-202ENST00000414675 API5Q9BZZ5 524 aaKnown RBP19.46■□□□□ 0.71
LRCH3-202ENST00000414675 RGS12O14924 1447 aa19.46■□□□□ 0.71
LRCH3-202ENST00000414675 RGPD2P0DJD1 1756 aa19.46■□□□□ 0.71
LRCH3-202ENST00000414675 SEC24BO95487 1268 aa19.46■□□□□ 0.71
LRCH3-202ENST00000414675 MSH6P52701 1360 aa19.46■□□□□ 0.71
LRCH3-202ENST00000414675 TSPYL4Q9UJ04 414 aa19.45■□□□□ 0.7
LRCH3-202ENST00000414675 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
LRCH3-202ENST00000414675 ZBTB7CA1YPR0 619 aa19.44■□□□□ 0.7
LRCH3-202ENST00000414675 PHRF1Q9P1Y6 1649 aaKnown RBP19.44■□□□□ 0.7
LRCH3-202ENST00000414675 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
LRCH3-202ENST00000414675 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
LRCH3-202ENST00000414675 USP19O94966 1318 aa19.44■□□□□ 0.7
LRCH3-202ENST00000414675 C1orf167Q5SNV9 1468 aa19.43■□□□□ 0.7
LRCH3-202ENST00000414675 GNAT3A8MTJ3 354 aa19.43■□□□□ 0.7
LRCH3-202ENST00000414675 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
LRCH3-202ENST00000414675 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
LRCH3-202ENST00000414675 LMTK3Q96Q04 1460 aa19.43■□□□□ 0.7
LRCH3-202ENST00000414675 HTATSF1O43719 755 aaKnown RBP19.42■□□□□ 0.7
LRCH3-202ENST00000414675 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
LRCH3-202ENST00000414675 IL17REQ8NFR9 667 aa19.42■□□□□ 0.7
LRCH3-202ENST00000414675 SLIT3O75094 1523 aa19.42■□□□□ 0.7
LRCH3-202ENST00000414675 MAP3K5Q99683 1374 aa19.42■□□□□ 0.7
LRCH3-202ENST00000414675 SIRT2Q8IXJ6 389 aa19.41■□□□□ 0.7
LRCH3-202ENST00000414675 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
LRCH3-202ENST00000414675 GCP02774 474 aa19.4■□□□□ 0.7
LRCH3-202ENST00000414675 DDRGK1Q96HY6 314 aa19.4■□□□□ 0.7
LRCH3-202ENST00000414675 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
LRCH3-202ENST00000414675 INTS3Q68E01 1043 aaKnown RBP19.4■□□□□ 0.7
LRCH3-202ENST00000414675 LMOD2Q6P5Q4 547 aa19.4■□□□□ 0.7
LRCH3-202ENST00000414675 LRRC59Q96AG4 307 aaKnown RBP19.4■□□□□ 0.7
LRCH3-202ENST00000414675 KIF1AQ12756 1690 aa19.39■□□□□ 0.7
LRCH3-202ENST00000414675 NUCB1Q02818 461 aa19.39■□□□□ 0.69
LRCH3-202ENST00000414675 NBR1Q14596 966 aa19.39■□□□□ 0.69
LRCH3-202ENST00000414675 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
LRCH3-202ENST00000414675 CHMP4BQ9H444 224 aaKnown RBP19.39■□□□□ 0.69
LRCH3-202ENST00000414675 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
LRCH3-202ENST00000414675 ARHGEF25Q86VW2 580 aa19.39■□□□□ 0.69
LRCH3-202ENST00000414675 G2E3Q7L622 706 aa19.38■□□□□ 0.69
LRCH3-202ENST00000414675 TMEM94Q12767 1356 aa19.37■□□□□ 0.69
LRCH3-202ENST00000414675 LNPKQ9C0E8 428 aa19.37■□□□□ 0.69
LRCH3-202ENST00000414675 PTPRCP08575 1304 aa19.37■□□□□ 0.69
LRCH3-202ENST00000414675 SLC4A3P48751 1232 aa19.36■□□□□ 0.69
LRCH3-202ENST00000414675 MST1RQ04912 1400 aa19.36■□□□□ 0.69
LRCH3-202ENST00000414675 STRCQ7RTU9 1775 aa19.36■□□□□ 0.69
LRCH3-202ENST00000414675 CHD1LQ86WJ1 897 aa19.35■□□□□ 0.69
LRCH3-202ENST00000414675 FAM208AQ9UK61 1670 aaKnown RBP19.35■□□□□ 0.69
LRCH3-202ENST00000414675 ALS2Q96Q42 1657 aa19.35■□□□□ 0.69
LRCH3-202ENST00000414675 TAF7Q15545 349 aaPredicted RBP19.34■□□□□ 0.69
LRCH3-202ENST00000414675 DDX17Q92841 729 aaKnown RBP19.34■□□□□ 0.69
LRCH3-202ENST00000414675 RGPD5Q99666 1765 aa19.34■□□□□ 0.69
LRCH3-202ENST00000414675 AXIN2Q9Y2T1 843 aa19.34■□□□□ 0.69
LRCH3-202ENST00000414675 GCC1Q96CN9 775 aa19.33■□□□□ 0.68
LRCH3-202ENST00000414675 CEMIPQ8WUJ3 1361 aa19.33■□□□□ 0.68
LRCH3-202ENST00000414675 ATP10DQ9P241 1426 aa19.33■□□□□ 0.68
LRCH3-202ENST00000414675 ANKRD45Q5TZF3 282 aa19.32■□□□□ 0.68
LRCH3-202ENST00000414675 LGR6Q9HBX8 967 aa19.32■□□□□ 0.68
LRCH3-202ENST00000414675 MED1Q15648 1581 aaPredicted RBP19.32■□□□□ 0.68
LRCH3-202ENST00000414675 NCAPD2Q15021 1401 aa19.32■□□□□ 0.68
LRCH3-202ENST00000414675 F6X3S4 739 aa19.32■□□□□ 0.68
LRCH3-202ENST00000414675 ANKRD24Q8TF21 1146 aa19.32■□□□□ 0.68
LRCH3-202ENST00000414675 ATF3P18847 181 aa19.31■□□□□ 0.68
LRCH3-202ENST00000414675 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
LRCH3-202ENST00000414675 LMO7Q8WWI1 1683 aa19.31■□□□□ 0.68
LRCH3-202ENST00000414675 MEIS3Q99687 375 aa19.31■□□□□ 0.68
LRCH3-202ENST00000414675 PXDNQ92626 1479 aa19.3■□□□□ 0.68
LRCH3-202ENST00000414675 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
LRCH3-202ENST00000414675 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
LRCH3-202ENST00000414675 RTL5Q5HYW3 569 aaPredicted RBP19.29■□□□□ 0.68
LRCH3-202ENST00000414675 CACNA1FO60840 1977 aa19.29■□□□□ 0.68
LRCH3-202ENST00000414675 DCCP43146 1447 aa19.29■□□□□ 0.68
LRCH3-202ENST00000414675 ZNF530Q6P9A1 599 aaPredicted RBP19.28■□□□□ 0.68
LRCH3-202ENST00000414675 STK31Q9BXU1 1019 aa19.28■□□□□ 0.68
LRCH3-202ENST00000414675 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
LRCH3-202ENST00000414675 ANKRD44Q8N8A2 993 aa19.28■□□□□ 0.68
LRCH3-202ENST00000414675 KDM3BQ7LBC6 1761 aa19.28■□□□□ 0.68
LRCH3-202ENST00000414675 CCDC30Q5VVM6 783 aa19.27■□□□□ 0.68
LRCH3-202ENST00000414675 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
LRCH3-202ENST00000414675 SLC4A10Q6U841 1118 aa19.27■□□□□ 0.68
LRCH3-202ENST00000414675 TBC1D32Q96NH3 1257 aa19.27■□□□□ 0.68
LRCH3-202ENST00000414675 FLIIQ13045 1269 aa19.27■□□□□ 0.68
LRCH3-202ENST00000414675 XIRP1Q702N8 1843 aaKnown RBP19.26■□□□□ 0.67
LRCH3-202ENST00000414675 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
LRCH3-202ENST00000414675 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
LRCH3-202ENST00000414675 AKAP4Q5JQC9 854 aa19.26■□□□□ 0.67
LRCH3-202ENST00000414675 MPRIPQ6WCQ1 1025 aa19.26■□□□□ 0.67
LRCH3-202ENST00000414675 DCTPP1Q9H773 170 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms