RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 C4orf48Q5BLP8 95 aa11.56□□□□□ -0.56
SMC4P1-201ENST00000414479 HINFPQ9BQA5 517 aa11.56□□□□□ -0.56
SMC4P1-201ENST00000414479 M0R2N6 131 aa11.55□□□□□ -0.56
SMC4P1-201ENST00000414479 SH3BP2P78314 561 aa11.55□□□□□ -0.56
SMC4P1-201ENST00000414479 KCTD15Q96SI1 283 aaPredicted RBP11.55□□□□□ -0.56
SMC4P1-201ENST00000414479 SLAIN2Q9P270 581 aa11.55□□□□□ -0.56
SMC4P1-201ENST00000414479 MAP4K5Q9Y4K4 846 aa11.55□□□□□ -0.56
SMC4P1-201ENST00000414479 PCDHGA11Q9Y5H2 935 aa11.55□□□□□ -0.56
SMC4P1-201ENST00000414479 SERPINB4P48594 390 aa11.54□□□□□ -0.56
SMC4P1-201ENST00000414479 WNT7BP56706 349 aa11.54□□□□□ -0.56
SMC4P1-201ENST00000414479 SFI1A8K8P3 1242 aa11.53□□□□□ -0.56
SMC4P1-201ENST00000414479 DKK1O94907 266 aa11.53□□□□□ -0.56
SMC4P1-201ENST00000414479 VASH1Q7L8A9 365 aaPredicted RBP11.53□□□□□ -0.56
SMC4P1-201ENST00000414479 POTEMA6NI47 508 aa11.52□□□□□ -0.57
SMC4P1-201ENST00000414479 MARSP56192 900 aaKnown RBP11.52□□□□□ -0.57
SMC4P1-201ENST00000414479 RAB15P59190 212 aa11.52□□□□□ -0.57
SMC4P1-201ENST00000414479 TRIM32Q13049 653 aa11.52□□□□□ -0.57
SMC4P1-201ENST00000414479 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.57
SMC4P1-201ENST00000414479 PTCD1O75127 700 aaKnown RBP11.51□□□□□ -0.57
SMC4P1-201ENST00000414479 ABL1P00519 1130 aa11.51□□□□□ -0.57
SMC4P1-201ENST00000414479 TAS1R3Q7RTX0 852 aa11.51□□□□□ -0.57
SMC4P1-201ENST00000414479 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
SMC4P1-201ENST00000414479 KCNC4Q03721 635 aa11.5□□□□□ -0.57
SMC4P1-201ENST00000414479 DHX9Q08211 1270 aaKnown RBP11.5□□□□□ -0.57
SMC4P1-201ENST00000414479 OCLNQ16625 522 aa11.5□□□□□ -0.57
SMC4P1-201ENST00000414479 GLYCTKQ8IVS8 523 aa11.5□□□□□ -0.57
SMC4P1-201ENST00000414479 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
SMC4P1-201ENST00000414479 PRIMPOLQ96LW4 560 aa11.5□□□□□ -0.57
SMC4P1-201ENST00000414479 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
SMC4P1-201ENST00000414479 RBM47A0AV96 593 aaKnown RBP11.48□□□□□ -0.57
SMC4P1-201ENST00000414479 H3BRB1 525 aa11.48□□□□□ -0.57
SMC4P1-201ENST00000414479 BACH1O14867 736 aa11.48□□□□□ -0.57
SMC4P1-201ENST00000414479 TUT1Q9H6E5 874 aaKnown RBP11.48□□□□□ -0.57
SMC4P1-201ENST00000414479 SF3B2Q13435 895 aaKnown RBP11.47□□□□□ -0.57
SMC4P1-201ENST00000414479 INTS6LQ5JSJ4 861 aaKnown RBP11.47□□□□□ -0.57
SMC4P1-201ENST00000414479 CC2D2BQ6DHV5 1058 aa11.47□□□□□ -0.57
SMC4P1-201ENST00000414479 EHBP1Q8NDI1 1231 aa11.47□□□□□ -0.57
SMC4P1-201ENST00000414479 ERVH48-1M5A8F1 160 aa11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 C21orf2O43822 256 aa11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 ICMTO60725 284 aa11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 WEE1P30291 646 aa11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 RPIAP49247 311 aa11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 DNAJC14Q6Y2X3 702 aaPredicted RBP11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 TSEN2Q8NCE0 465 aaKnown RBP11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 COL26A1Q96A83 441 aa11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMC4P1-201ENST00000414479 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
SMC4P1-201ENST00000414479 FOXO3O43524 673 aa11.44□□□□□ -0.58
SMC4P1-201ENST00000414479 ERVK-9P63128 1117 aa11.44□□□□□ -0.58
SMC4P1-201ENST00000414479 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
SMC4P1-201ENST00000414479 WASLO00401 505 aaPredicted RBP11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 CD2BP2O95400 341 aaKnown RBP11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 IGFBP4P22692 258 aa11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 BCL2L13Q9BXK5 485 aa11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 ZNF358Q9NW07 568 aa11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 HCSTQ9UBK5 93 aa11.43□□□□□ -0.58
SMC4P1-201ENST00000414479 PPEF1O14829 653 aaPredicted RBP11.42□□□□□ -0.58
SMC4P1-201ENST00000414479 ZNF211Q13398 564 aaPredicted RBP11.42□□□□□ -0.58
SMC4P1-201ENST00000414479 CYP2U1Q7Z449 544 aa11.42□□□□□ -0.58
SMC4P1-201ENST00000414479 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMC4P1-201ENST00000414479 GAS2L2Q8NHY3 880 aa11.42□□□□□ -0.58
SMC4P1-201ENST00000414479 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
SMC4P1-201ENST00000414479 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
SMC4P1-201ENST00000414479 FSHRP23945 695 aa11.41□□□□□ -0.58
SMC4P1-201ENST00000414479 FKBP4Q02790 459 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMC4P1-201ENST00000414479 ZSCAN29Q8IWY8 852 aaPredicted RBP11.41□□□□□ -0.58
SMC4P1-201ENST00000414479 MAPK1P28482 360 aa11.4□□□□□ -0.58
SMC4P1-201ENST00000414479 SCTRP47872 440 aa11.4□□□□□ -0.58
SMC4P1-201ENST00000414479 GDF10P55107 478 aa11.4□□□□□ -0.58
SMC4P1-201ENST00000414479 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
SMC4P1-201ENST00000414479 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.58
SMC4P1-201ENST00000414479 CDK15Q96Q40 435 aa11.4□□□□□ -0.58
SMC4P1-201ENST00000414479 SCNN1AP37088 669 aa11.39□□□□□ -0.59
SMC4P1-201ENST00000414479 FKBP5Q13451 457 aaPredicted RBP11.39□□□□□ -0.59
SMC4P1-201ENST00000414479 MPNDQ8N594 471 aa11.39□□□□□ -0.59
SMC4P1-201ENST00000414479 DCTN4Q9UJW0 460 aa11.39□□□□□ -0.59
SMC4P1-201ENST00000414479 ANKRD33BA6NCL7 494 aa11.38□□□□□ -0.59
SMC4P1-201ENST00000414479 SKOR1P84550 965 aa11.38□□□□□ -0.59
SMC4P1-201ENST00000414479 MYT1Q01538 1121 aa11.38□□□□□ -0.59
SMC4P1-201ENST00000414479 TMEM229AB2RXF0 380 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 CCDC116Q8IYX3 515 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 HELQQ8TDG4 1101 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 ANO2Q9NQ90 1003 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 CYLDQ9NQC7 956 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 CHMP3Q9Y3E7 222 aa11.37□□□□□ -0.59
SMC4P1-201ENST00000414479 FAM13AO94988 1023 aa11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 GNRH1P01148 92 aa11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 INHAP05111 366 aa11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 NR5A1Q13285 461 aa11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 SCG3Q8WXD2 468 aaKnown RBP11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 OSBPL3Q9H4L5 887 aa11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 SEPT3Q9UH03 358 aa11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 DNMT3AQ9Y6K1 912 aaPredicted RBP11.36□□□□□ -0.59
SMC4P1-201ENST00000414479 LGR5O75473 907 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms