RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
DDB1-202ENST00000414411 AFF2P51816 1311 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 USP21Q9UK80 565 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 CRB1P82279 1406 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 TOM1L2Q6ZVM7 507 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
DDB1-202ENST00000414411 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.14□□□□□ -0.31
DDB1-202ENST00000414411 HMOX1P09601 288 aa13.14□□□□□ -0.31
DDB1-202ENST00000414411 VPS72Q15906 364 aa13.14□□□□□ -0.31
DDB1-202ENST00000414411 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
DDB1-202ENST00000414411 SPATA31A5Q5VU36 1347 aa13.14□□□□□ -0.31
DDB1-202ENST00000414411 SPATA31A7Q8IWB4 1347 aa13.14□□□□□ -0.31
DDB1-202ENST00000414411 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
DDB1-202ENST00000414411 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
DDB1-202ENST00000414411 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
DDB1-202ENST00000414411 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
DDB1-202ENST00000414411 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
DDB1-202ENST00000414411 ATRNO75882 1429 aa13.11□□□□□ -0.31
DDB1-202ENST00000414411 TCP11L2Q8N4U5 519 aa13.11□□□□□ -0.31
DDB1-202ENST00000414411 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
DDB1-202ENST00000414411 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
DDB1-202ENST00000414411 PNNQ9H307 717 aaKnown RBP13.1□□□□□ -0.31
DDB1-202ENST00000414411 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
DDB1-202ENST00000414411 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
DDB1-202ENST00000414411 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
DDB1-202ENST00000414411 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
DDB1-202ENST00000414411 QTRT2Q9H974 415 aaKnown RBP13.09□□□□□ -0.31
DDB1-202ENST00000414411 RGS17Q9UGC6 210 aaPredicted RBP13.09□□□□□ -0.31
DDB1-202ENST00000414411 TRPC5Q9UL62 973 aaPredicted RBP13.09□□□□□ -0.31
DDB1-202ENST00000414411 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
DDB1-202ENST00000414411 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
DDB1-202ENST00000414411 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
DDB1-202ENST00000414411 GJD4Q96KN9 370 aaPredicted RBP13.09□□□□□ -0.31
DDB1-202ENST00000414411 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
DDB1-202ENST00000414411 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
DDB1-202ENST00000414411 IL2RBP14784 551 aa13.08□□□□□ -0.32
DDB1-202ENST00000414411 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
DDB1-202ENST00000414411 MEGF6O75095 1541 aa13.08□□□□□ -0.32
DDB1-202ENST00000414411 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
DDB1-202ENST00000414411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDB1-202ENST00000414411 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
DDB1-202ENST00000414411 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
DDB1-202ENST00000414411 GLI3P10071 1580 aa13.07□□□□□ -0.32
DDB1-202ENST00000414411 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
DDB1-202ENST00000414411 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
DDB1-202ENST00000414411 APAF1O14727 1248 aa13.05□□□□□ -0.32
DDB1-202ENST00000414411 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
DDB1-202ENST00000414411 AMOTQ4VCS5 1084 aa13.05□□□□□ -0.32
DDB1-202ENST00000414411 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
DDB1-202ENST00000414411 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
DDB1-202ENST00000414411 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
DDB1-202ENST00000414411 MAPK8IP3Q9UPT6 1336 aa13.05□□□□□ -0.32
DDB1-202ENST00000414411 PARP4Q9UKK3 1724 aaKnown RBP13.04□□□□□ -0.32
DDB1-202ENST00000414411 TMPOP42166 694 aaKnown RBP13.04□□□□□ -0.32
DDB1-202ENST00000414411 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
DDB1-202ENST00000414411 PKD1L3Q7Z443 1732 aa13.04□□□□□ -0.32
DDB1-202ENST00000414411 NEFMP07197 916 aa13.03□□□□□ -0.32
DDB1-202ENST00000414411 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
DDB1-202ENST00000414411 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
DDB1-202ENST00000414411 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
DDB1-202ENST00000414411 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
DDB1-202ENST00000414411 POTEAQ6S8J7 498 aa13.03□□□□□ -0.32
DDB1-202ENST00000414411 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
DDB1-202ENST00000414411 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
DDB1-202ENST00000414411 DLG5Q8TDM6 1919 aa13.02□□□□□ -0.33
DDB1-202ENST00000414411 THSD7AQ9UPZ6 1657 aa13.02□□□□□ -0.33
DDB1-202ENST00000414411 EXOC5O00471 708 aa13.01□□□□□ -0.33
DDB1-202ENST00000414411 CYP27B1O15528 508 aa13.01□□□□□ -0.33
DDB1-202ENST00000414411 RIPK4P57078 832 aa13.01□□□□□ -0.33
DDB1-202ENST00000414411 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
DDB1-202ENST00000414411 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
DDB1-202ENST00000414411 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
DDB1-202ENST00000414411 SENP3-EIF4A1A0A087X0R7 540 aa13.01□□□□□ -0.33
DDB1-202ENST00000414411 ZNF530Q6P9A1 599 aaPredicted RBP13.01□□□□□ -0.33
DDB1-202ENST00000414411 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
DDB1-202ENST00000414411 NEUROD2Q15784 382 aa13□□□□□ -0.33
DDB1-202ENST00000414411 DDB1Q16531 1140 aa13□□□□□ -0.33
DDB1-202ENST00000414411 CCDC27Q2M243 656 aa13□□□□□ -0.33
DDB1-202ENST00000414411 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
DDB1-202ENST00000414411 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
DDB1-202ENST00000414411 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
DDB1-202ENST00000414411 PHKG2P15735 406 aa13□□□□□ -0.33
DDB1-202ENST00000414411 RXRBP28702 533 aa13□□□□□ -0.33
DDB1-202ENST00000414411 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
DDB1-202ENST00000414411 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
DDB1-202ENST00000414411 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
DDB1-202ENST00000414411 TNS2Q63HR2 1409 aa12.99□□□□□ -0.33
DDB1-202ENST00000414411 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
DDB1-202ENST00000414411 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
DDB1-202ENST00000414411 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
DDB1-202ENST00000414411 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
DDB1-202ENST00000414411 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
DDB1-202ENST00000414411 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
DDB1-202ENST00000414411 C1orf141Q5JVX7 400 aa12.98□□□□□ -0.33
DDB1-202ENST00000414411 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
DDB1-202ENST00000414411 MARCH10Q8NA82 808 aaPredicted RBP12.98□□□□□ -0.33
DDB1-202ENST00000414411 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms