RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 EMILIN1Q9Y6C2 1016 aa28.52■■■□□ 2.16
LMBR1-203ENST00000414218 KIF24Q5T7B8 1368 aa28.51■■■□□ 2.16
LMBR1-203ENST00000414218 CGNL1Q0VF96 1302 aa28.51■■■□□ 2.15
LMBR1-203ENST00000414218 SLC15A2Q16348 729 aa28.51■■■□□ 2.15
LMBR1-203ENST00000414218 CASZ1Q86V15 1759 aa28.51■■■□□ 2.15
LMBR1-203ENST00000414218 SHANK3Q9BYB0 1731 aa28.51■■■□□ 2.15
LMBR1-203ENST00000414218 RAPGEF4Q8WZA2 1011 aa28.5■■■□□ 2.15
LMBR1-203ENST00000414218 PPM1GO15355 546 aaPredicted RBP28.49■■■□□ 2.15
LMBR1-203ENST00000414218 PRIM1P49642 420 aaKnown RBP28.49■■■□□ 2.15
LMBR1-203ENST00000414218 PPP1R1BQ9UD71 204 aaPredicted RBP28.49■■■□□ 2.15
LMBR1-203ENST00000414218 SYTL4Q96C24 671 aaPredicted RBP28.48■■■□□ 2.15
LMBR1-203ENST00000414218 TATP17735 454 aaPredicted RBP28.47■■■□□ 2.15
LMBR1-203ENST00000414218 DOT1LQ8TEK3 1739 aa28.46■■■□□ 2.15
LMBR1-203ENST00000414218 ZBTB7AO95365 584 aa28.46■■■□□ 2.15
LMBR1-203ENST00000414218 MAP2P11137 1827 aaKnown RBP28.46■■■□□ 2.15
LMBR1-203ENST00000414218 LRRC4BQ9NT99 713 aa28.45■■■□□ 2.14
LMBR1-203ENST00000414218 PANK3Q9H999 370 aa28.42■■■□□ 2.14
LMBR1-203ENST00000414218 ATF5Q9Y2D1 282 aaPredicted RBP28.42■■■□□ 2.14
LMBR1-203ENST00000414218 PAPPAQ13219 1627 aa28.42■■■□□ 2.14
LMBR1-203ENST00000414218 ANKRD26Q9UPS8 1709 aa28.41■■■□□ 2.14
LMBR1-203ENST00000414218 POLKQ9UBT6 870 aa28.41■■■□□ 2.14
LMBR1-203ENST00000414218 WASHC2AQ641Q2 1341 aa28.41■■■□□ 2.14
LMBR1-203ENST00000414218 NSD2O96028 1365 aa28.4■■■□□ 2.14
LMBR1-203ENST00000414218 TNNT2P45379 298 aaPredicted RBP28.4■■■□□ 2.14
LMBR1-203ENST00000414218 ZNF827Q17R98 1081 aa28.39■■■□□ 2.14
LMBR1-203ENST00000414218 SLC27A3Q5K4L6 730 aa28.39■■■□□ 2.14
LMBR1-203ENST00000414218 KCNQ4P56696 695 aa28.38■■■□□ 2.13
LMBR1-203ENST00000414218 PTGER2P43116 358 aa28.37■■■□□ 2.13
LMBR1-203ENST00000414218 PCDH11XQ9BZA7 1347 aa28.37■■■□□ 2.13
LMBR1-203ENST00000414218 PCDH11YQ9BZA8 1340 aa28.37■■■□□ 2.13
LMBR1-203ENST00000414218 EYA1Q99502 592 aa28.35■■■□□ 2.13
LMBR1-203ENST00000414218 CYP27B1O15528 508 aa28.34■■■□□ 2.13
LMBR1-203ENST00000414218 AKT1S1Q96B36 256 aa28.34■■■□□ 2.13
LMBR1-203ENST00000414218 MTFR1LQ9H019 292 aa28.34■■■□□ 2.13
LMBR1-203ENST00000414218 NCAPD2Q15021 1401 aa28.34■■■□□ 2.13
LMBR1-203ENST00000414218 LY75O60449 1722 aa28.33■■■□□ 2.13
LMBR1-203ENST00000414218 PKD1L3Q7Z443 1732 aa28.31■■■□□ 2.12
LMBR1-203ENST00000414218 EIF4A2Q14240 407 aaKnown RBP28.3■■■□□ 2.12
LMBR1-203ENST00000414218 CCNL1Q9UK58 526 aaPredicted RBP28.29■■■□□ 2.12
LMBR1-203ENST00000414218 SPG7Q9UQ90 795 aa28.29■■■□□ 2.12
LMBR1-203ENST00000414218 MPRIPQ6WCQ1 1025 aa28.27■■■□□ 2.12
LMBR1-203ENST00000414218 SGIP1Q9BQI5 828 aa28.27■■■□□ 2.12
LMBR1-203ENST00000414218 TFCP2L1Q9NZI6 479 aa28.27■■■□□ 2.12
LMBR1-203ENST00000414218 MORC1Q86VD1 984 aa28.26■■■□□ 2.11
LMBR1-203ENST00000414218 QSER1Q2KHR3 1735 aa28.26■■■□□ 2.11
LMBR1-203ENST00000414218 TOGARAM1Q9Y4F4 1720 aa28.25■■■□□ 2.11
LMBR1-203ENST00000414218 ITGB4P16144 1822 aa28.25■■■□□ 2.11
LMBR1-203ENST00000414218 TUBGCP6Q96RT7 1819 aa28.25■■■□□ 2.11
LMBR1-203ENST00000414218 PNPLA7Q6ZV29 1317 aa28.24■■■□□ 2.11
LMBR1-203ENST00000414218 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
LMBR1-203ENST00000414218 NKX1-1Q15270 411 aaPredicted RBP28.23■■■□□ 2.11
LMBR1-203ENST00000414218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.23■■■□□ 2.112e-7■□□□□ 9.4
LMBR1-203ENST00000414218 KIF7Q2M1P5 1343 aa28.22■■■□□ 2.11
LMBR1-203ENST00000414218 DCAF8L1A6NGE4 600 aa28.22■■■□□ 2.11
LMBR1-203ENST00000414218 FHDC1Q9C0D6 1143 aaPredicted RBP28.22■■■□□ 2.11
LMBR1-203ENST00000414218 SLC16A10Q8TF71 515 aa28.21■■■□□ 2.11
LMBR1-203ENST00000414218 ARXQ96QS3 562 aa28.21■■■□□ 2.11
LMBR1-203ENST00000414218 PIGBQ92521 554 aa28.2■■■□□ 2.1
LMBR1-203ENST00000414218 PALLDQ8WX93 1383 aa28.2■■■□□ 2.1
LMBR1-203ENST00000414218 SYT17Q9BSW7 474 aa28.19■■■□□ 2.1
LMBR1-203ENST00000414218 IGSF1Q8N6C5 1336 aa28.18■■■□□ 2.1
LMBR1-203ENST00000414218 PHKG2P15735 406 aa28.17■■■□□ 2.1
LMBR1-203ENST00000414218 IFNL2Q8IZJ0 200 aa28.17■■■□□ 2.1
LMBR1-203ENST00000414218 SMARCC1Q92922 1105 aaPredicted RBP28.17■■■□□ 2.1
LMBR1-203ENST00000414218 C5P01031 1676 aa28.16■■■□□ 2.1
LMBR1-203ENST00000414218 AMER1Q5JTC6 1135 aaPredicted RBP28.15■■■□□ 2.1
LMBR1-203ENST00000414218 MSH5O43196 834 aa28.14■■■□□ 2.1
LMBR1-203ENST00000414218 TAF1LQ8IZX4 1826 aa28.13■■■□□ 2.09
LMBR1-203ENST00000414218 COL23A1Q86Y22 540 aaPredicted RBP28.13■■■□□ 2.09
LMBR1-203ENST00000414218 TMOD3Q9NYL9 352 aa28.13■■■□□ 2.09
LMBR1-203ENST00000414218 POLD1P28340 1107 aa28.12■■■□□ 2.09
LMBR1-203ENST00000414218 COL24A1Q17RW2 1714 aa28.12■■■□□ 2.09
LMBR1-203ENST00000414218 YY1P25490 414 aa28.11■■■□□ 2.09
LMBR1-203ENST00000414218 HMGB2P26583 209 aaKnown RBP28.1■■■□□ 2.09
LMBR1-203ENST00000414218 PLEKHG2Q9H7P9 1386 aa28.1■■■□□ 2.09
LMBR1-203ENST00000414218 PLEKHO1Q53GL0 409 aaPredicted RBP28.09■■■□□ 2.09
LMBR1-203ENST00000414218 AEBP1Q8IUX7 1158 aa28.09■■■□□ 2.09
LMBR1-203ENST00000414218 ASAP1Q9ULH1 1129 aa28.09■■■□□ 2.09
LMBR1-203ENST00000414218 PER1O15534 1290 aaPredicted RBP28.07■■■□□ 2.08
LMBR1-203ENST00000414218 KLHL34Q8N239 644 aa28.07■■■□□ 2.08
LMBR1-203ENST00000414218 MAP3K5Q99683 1374 aa28.07■■■□□ 2.08
LMBR1-203ENST00000414218 C4BP0C0L5 1744 aa28.06■■■□□ 2.08
LMBR1-203ENST00000414218 LOC102724428A0A0B4J2F2 783 aa28.06■■■□□ 2.08
LMBR1-203ENST00000414218 IL13P35225 146 aa28.06■■■□□ 2.08
LMBR1-203ENST00000414218 SIK1P57059 783 aa28.06■■■□□ 2.08
LMBR1-203ENST00000414218 SULT6B1Q6IMI4 303 aa28.06■■■□□ 2.08
LMBR1-203ENST00000414218 ZNF530Q6P9A1 599 aaPredicted RBP28.06■■■□□ 2.08
LMBR1-203ENST00000414218 AK7Q96M32 723 aa28.05■■■□□ 2.08
LMBR1-203ENST00000414218 HSP90AB1P08238 724 aaKnown RBP28.04■■■□□ 2.08
LMBR1-203ENST00000414218 AMOTQ4VCS5 1084 aa28.04■■■□□ 2.08
LMBR1-203ENST00000414218 MSL1Q68DK7 614 aa28.04■■■□□ 2.08
LMBR1-203ENST00000414218 FLAD1Q8NFF5 587 aa28.04■■■□□ 2.08
LMBR1-203ENST00000414218 ATG3Q9NT62 314 aa28.04■■■□□ 2.08
LMBR1-203ENST00000414218 MTHFSP49914 203 aa28.03■■■□□ 2.08
LMBR1-203ENST00000414218 CC2D1BQ5T0F9 858 aaKnown RBP28.03■■■□□ 2.08
LMBR1-203ENST00000414218 DCAF5Q96JK2 942 aa28.03■■■□□ 2.08
LMBR1-203ENST00000414218 ERVV-2B6SEH9 535 aa28.02■■■□□ 2.08
LMBR1-203ENST00000414218 SMIM5Q71RC9 77 aa28.02■■■□□ 2.08
LMBR1-203ENST00000414218 LINC00116Q8NCU8 138 aa28.02■■■□□ 2.08
LMBR1-203ENST00000414218 AMIGO3Q86WK7 504 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms