RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 PIK3C2BO00750 1634 aa10.53□□□□□ -0.72
NR1I3-208ENST00000412844 USP46P62068 366 aa10.52□□□□□ -0.73
NR1I3-208ENST00000412844 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
NR1I3-208ENST00000412844 TET3O43151 1660 aa10.52□□□□□ -0.73
NR1I3-208ENST00000412844 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
NR1I3-208ENST00000412844 GRIPAP1Q4V328 841 aa10.51□□□□□ -0.73
NR1I3-208ENST00000412844 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
NR1I3-208ENST00000412844 KCTD12Q96CX2 325 aaKnown RBP10.51□□□□□ -0.73
NR1I3-208ENST00000412844 SLAIN2Q9P270 581 aa10.51□□□□□ -0.73
NR1I3-208ENST00000412844 TSR3Q9UJK0 312 aaKnown RBP10.51□□□□□ -0.73
NR1I3-208ENST00000412844 ADGRB3O60242 1522 aa10.5□□□□□ -0.73
NR1I3-208ENST00000412844 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
NR1I3-208ENST00000412844 VPS8Q8N3P4 1428 aa10.5□□□□□ -0.73
NR1I3-208ENST00000412844 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
NR1I3-208ENST00000412844 IDI1Q13907 227 aa10.49□□□□□ -0.73
NR1I3-208ENST00000412844 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
NR1I3-208ENST00000412844 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
NR1I3-208ENST00000412844 POLR3EQ9NVU0 708 aa10.49□□□□□ -0.73
NR1I3-208ENST00000412844 CROCC2H7BZ55 1655 aa10.49□□□□□ -0.73
NR1I3-208ENST00000412844 CDK12Q9NYV4 1490 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-208ENST00000412844 CLK2P49760 499 aaKnown RBP10.48□□□□□ -0.73
NR1I3-208ENST00000412844 NOS1P29475 1434 aa10.48□□□□□ -0.73
NR1I3-208ENST00000412844 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
NR1I3-208ENST00000412844 SLC26A8Q96RN1 970 aa10.47□□□□□ -0.73
NR1I3-208ENST00000412844 PIK3R4Q99570 1358 aa10.47□□□□□ -0.73
NR1I3-208ENST00000412844 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
NR1I3-208ENST00000412844 PLEKHG1Q9ULL1 1385 aa10.47□□□□□ -0.73
NR1I3-208ENST00000412844 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-208ENST00000412844 FUT2Q10981 343 aa10.46□□□□□ -0.73
NR1I3-208ENST00000412844 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
NR1I3-208ENST00000412844 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
NR1I3-208ENST00000412844 SHPRHQ149N8 1683 aa10.45□□□□□ -0.74
NR1I3-208ENST00000412844 AHDC1Q5TGY3 1603 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-208ENST00000412844 DIP2AQ14689 1571 aa10.45□□□□□ -0.74
NR1I3-208ENST00000412844 ABCC5O15440 1437 aa10.45□□□□□ -0.74
NR1I3-208ENST00000412844 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.45□□□□□ -0.74
NR1I3-208ENST00000412844 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
NR1I3-208ENST00000412844 TBX22Q9Y458 520 aa10.45□□□□□ -0.74
NR1I3-208ENST00000412844 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
NR1I3-208ENST00000412844 SETD1AO15047 1707 aaKnown RBP10.44□□□□□ -0.74
NR1I3-208ENST00000412844 DAPK1P53355 1430 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 MOXD2PA6NHM9 499 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 HOXA2O43364 376 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 ACTN4O43707 911 aaKnown RBP10.44□□□□□ -0.74
NR1I3-208ENST00000412844 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-208ENST00000412844 ATF3P18847 181 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 ATP6V1AP38606 617 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 WBP1LQ9NX94 342 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 PTPN23Q9H3S7 1636 aa10.44□□□□□ -0.74
NR1I3-208ENST00000412844 ZFYVE9O95405 1425 aa10.43□□□□□ -0.74
NR1I3-208ENST00000412844 DCCP43146 1447 aa10.43□□□□□ -0.74
NR1I3-208ENST00000412844 RXRBP28702 533 aa10.43□□□□□ -0.74
NR1I3-208ENST00000412844 GJA5P36382 358 aa10.43□□□□□ -0.74
NR1I3-208ENST00000412844 PTPN5P54829 565 aa10.43□□□□□ -0.74
NR1I3-208ENST00000412844 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-208ENST00000412844 NYAP1Q6ZVC0 841 aa10.43□□□□□ -0.74
NR1I3-208ENST00000412844 NDUFV2P19404 249 aa10.42□□□□□ -0.74
NR1I3-208ENST00000412844 C14orf37Q86TY3 774 aa10.42□□□□□ -0.74
NR1I3-208ENST00000412844 SPTLC1O15269 473 aa10.41□□□□□ -0.74
NR1I3-208ENST00000412844 FDX1P10109 184 aa10.41□□□□□ -0.74
NR1I3-208ENST00000412844 APLP1P51693 650 aa10.41□□□□□ -0.74
NR1I3-208ENST00000412844 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
NR1I3-208ENST00000412844 PCDHB3Q9Y5E6 796 aa10.41□□□□□ -0.74
NR1I3-208ENST00000412844 RIMS2Q9UQ26 1411 aa10.41□□□□□ -0.74
NR1I3-208ENST00000412844 LRP6O75581 1613 aa10.4□□□□□ -0.74
NR1I3-208ENST00000412844 CSPP1Q1MSJ5 1256 aa10.4□□□□□ -0.74
NR1I3-208ENST00000412844 PROCA1Q8NCQ7 364 aaPredicted RBP10.4□□□□□ -0.74
NR1I3-208ENST00000412844 ADGRL2O95490 1459 aa10.4□□□□□ -0.74
NR1I3-208ENST00000412844 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
NR1I3-208ENST00000412844 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 TRPM2O94759 1503 aa10.38□□□□□ -0.75
NR1I3-208ENST00000412844 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
NR1I3-208ENST00000412844 NUTM2BA6NNL0 878 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 NUTM2EB1AL46 878 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 Q3C1V9 767 aa10.38□□□□□ -0.75
NR1I3-208ENST00000412844 PUS10Q3MIT2 529 aaKnown RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 KANK4Q5T7N3 995 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 NUTM2AQ8IVF1 878 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-208ENST00000412844 TRIM52Q96A61 297 aa10.38□□□□□ -0.75
NR1I3-208ENST00000412844 SETD5Q9C0A6 1442 aa10.38□□□□□ -0.75
NR1I3-208ENST00000412844 NR1I2O75469 434 aa10.37□□□□□ -0.75
NR1I3-208ENST00000412844 SPNS2Q8IVW8 549 aa10.37□□□□□ -0.75
NR1I3-208ENST00000412844 LRRC59Q96AG4 307 aaKnown RBP10.37□□□□□ -0.75
NR1I3-208ENST00000412844 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.37□□□□□ -0.75
NR1I3-208ENST00000412844 ZBTB3Q9H5J0 574 aa10.37□□□□□ -0.75
NR1I3-208ENST00000412844 GCC2Q8IWJ2 1684 aa10.37□□□□□ -0.75
NR1I3-208ENST00000412844 SRCAPQ6ZRS2 3230 aa10.36□□□□□ -0.75
NR1I3-208ENST00000412844 ANKRD50Q9ULJ7 1429 aa10.36□□□□□ -0.75
NR1I3-208ENST00000412844 RBM6P78332 1123 aaKnown RBP10.36□□□□□ -0.75
NR1I3-208ENST00000412844 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
NR1I3-208ENST00000412844 MORN1Q5T089 497 aa10.36□□□□□ -0.75
NR1I3-208ENST00000412844 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
NR1I3-208ENST00000412844 HLA-CQ95604 372 aa10.36□□□□□ -0.75
NR1I3-208ENST00000412844 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
NR1I3-208ENST00000412844 ADAMTS13Q76LX8 1427 aa10.35□□□□□ -0.75
NR1I3-208ENST00000412844 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
NR1I3-208ENST00000412844 ASXL1Q8IXJ9 1541 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms