RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 CC2D1BQ5T0F9 858 aaKnown RBP22.69■■□□□ 1.22
PMS2P4-201ENST00000412466 PDGFDQ9GZP0 370 aaPredicted RBP22.67■■□□□ 1.22
PMS2P4-201ENST00000412466 MTFR1LQ9H019 292 aa22.67■■□□□ 1.22
PMS2P4-201ENST00000412466 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
PMS2P4-201ENST00000412466 MAP2P11137 1827 aaKnown RBP22.66■■□□□ 1.22
PMS2P4-201ENST00000412466 KIF24Q5T7B8 1368 aa22.65■■□□□ 1.22
PMS2P4-201ENST00000412466 PTGER2P43116 358 aa22.65■■□□□ 1.22
PMS2P4-201ENST00000412466 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.22
PMS2P4-201ENST00000412466 RALBP1Q15311 655 aa22.63■■□□□ 1.21
PMS2P4-201ENST00000412466 IP6K1Q92551 441 aa22.63■■□□□ 1.21
PMS2P4-201ENST00000412466 TNNT2P45379 298 aaPredicted RBP22.61■■□□□ 1.21
PMS2P4-201ENST00000412466 QSER1Q2KHR3 1735 aa22.6■■□□□ 1.21
PMS2P4-201ENST00000412466 AMPHP49418 695 aa22.6■■□□□ 1.21
PMS2P4-201ENST00000412466 LTV1Q96GA3 475 aaPredicted RBP22.6■■□□□ 1.21
PMS2P4-201ENST00000412466 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
PMS2P4-201ENST00000412466 DOT1LQ8TEK3 1739 aa22.6■■□□□ 1.21
PMS2P4-201ENST00000412466 MAP3K19Q56UN5 1328 aa22.59■■□□□ 1.21
PMS2P4-201ENST00000412466 FHDC1Q9C0D6 1143 aaPredicted RBP22.59■■□□□ 1.21
PMS2P4-201ENST00000412466 POLKQ9UBT6 870 aa22.59■■□□□ 1.21
PMS2P4-201ENST00000412466 CNGB1Q14028 1251 aaPredicted RBP22.58■■□□□ 1.21
PMS2P4-201ENST00000412466 RRS1Q15050 365 aaKnown RBP22.58■■□□□ 1.21
PMS2P4-201ENST00000412466 DDX54Q8TDD1 881 aaKnown RBP22.58■■□□□ 1.21
PMS2P4-201ENST00000412466 FBLN1P23142 703 aa22.57■■□□□ 1.2
PMS2P4-201ENST00000412466 SLC27A3Q5K4L6 730 aa22.57■■□□□ 1.2
PMS2P4-201ENST00000412466 FLT4P35916 1363 aa22.56■■□□□ 1.2
PMS2P4-201ENST00000412466 ARXQ96QS3 562 aa22.56■■□□□ 1.2
PMS2P4-201ENST00000412466 SYT17Q9BSW7 474 aa22.56■■□□□ 1.2
PMS2P4-201ENST00000412466 SMG6Q86US8 1419 aaKnown RBP22.56■■□□□ 1.2
PMS2P4-201ENST00000412466 MAP3K5Q99683 1374 aa22.55■■□□□ 1.2
PMS2P4-201ENST00000412466 ANP32CO43423 234 aa22.55■■□□□ 1.2
PMS2P4-201ENST00000412466 HOXC9P31274 260 aa22.55■■□□□ 1.2
PMS2P4-201ENST00000412466 ZNF827Q17R98 1081 aa22.55■■□□□ 1.2
PMS2P4-201ENST00000412466 SGIP1Q9BQI5 828 aa22.55■■□□□ 1.2
PMS2P4-201ENST00000412466 PRKRIP1Q9H875 184 aaPredicted RBP22.55■■□□□ 1.2
PMS2P4-201ENST00000412466 SYTL4Q96C24 671 aaPredicted RBP22.54■■□□□ 1.2
PMS2P4-201ENST00000412466 EMILIN1Q9Y6C2 1016 aa22.54■■□□□ 1.2
PMS2P4-201ENST00000412466 SHANK3Q9BYB0 1731 aa22.54■■□□□ 1.2
PMS2P4-201ENST00000412466 RGPD2P0DJD1 1756 aa22.53■■□□□ 1.2
PMS2P4-201ENST00000412466 PPM1GO15355 546 aaPredicted RBP22.53■■□□□ 1.2
PMS2P4-201ENST00000412466 INSRP06213 1382 aa22.52■■□□□ 1.2
PMS2P4-201ENST00000412466 LY75O60449 1722 aa22.52■■□□□ 1.2
PMS2P4-201ENST00000412466 PPP2R1AP30153 589 aa22.52■■□□□ 1.2
PMS2P4-201ENST00000412466 MTHFSP49914 203 aa22.52■■□□□ 1.2
PMS2P4-201ENST00000412466 SLC16A10Q8TF71 515 aa22.52■■□□□ 1.2
PMS2P4-201ENST00000412466 LRRC4BQ9NT99 713 aa22.52■■□□□ 1.2
PMS2P4-201ENST00000412466 CHD4Q14839 1912 aa22.52■■□□□ 1.2
PMS2P4-201ENST00000412466 POLD1P28340 1107 aa22.51■■□□□ 1.19
PMS2P4-201ENST00000412466 MEGF6O75095 1541 aa22.51■■□□□ 1.19
PMS2P4-201ENST00000412466 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
PMS2P4-201ENST00000412466 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
PMS2P4-201ENST00000412466 AKT1S1Q96B36 256 aa22.5■■□□□ 1.19
PMS2P4-201ENST00000412466 MYBBP1AQ9BQG0 1328 aaKnown RBP22.5■■□□□ 1.19
PMS2P4-201ENST00000412466 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
PMS2P4-201ENST00000412466 HSP90AB2PQ58FF8 381 aa22.48■■□□□ 1.19
PMS2P4-201ENST00000412466 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
PMS2P4-201ENST00000412466 TFCP2L1Q9NZI6 479 aa22.48■■□□□ 1.19
PMS2P4-201ENST00000412466 COL24A1Q17RW2 1714 aa22.48■■□□□ 1.19
PMS2P4-201ENST00000412466 PRIM1P49642 420 aaKnown RBP22.47■■□□□ 1.19
PMS2P4-201ENST00000412466 RAPGEF4Q8WZA2 1011 aa22.47■■□□□ 1.19
PMS2P4-201ENST00000412466 KLHL34Q8N239 644 aa22.46■■□□□ 1.19
PMS2P4-201ENST00000412466 PNPLA7Q6ZV29 1317 aa22.46■■□□□ 1.19
PMS2P4-201ENST00000412466 ZNF784Q8NCA9 323 aaPredicted RBP22.44■■□□□ 1.18
PMS2P4-201ENST00000412466 CCNL1Q9UK58 526 aaPredicted RBP22.44■■□□□ 1.18
PMS2P4-201ENST00000412466 TATP17735 454 aaPredicted RBP22.43■■□□□ 1.18
PMS2P4-201ENST00000412466 HMGB2P26583 209 aaKnown RBP22.43■■□□□ 1.18
PMS2P4-201ENST00000412466 GPR162Q16538 588 aa22.42■■□□□ 1.18
PMS2P4-201ENST00000412466 PCDH11XQ9BZA7 1347 aa22.41■■□□□ 1.18
PMS2P4-201ENST00000412466 PCDH11YQ9BZA8 1340 aa22.41■■□□□ 1.18
PMS2P4-201ENST00000412466 DIAPH1O60610 1272 aaKnown RBP22.41■■□□□ 1.18
PMS2P4-201ENST00000412466 NBPF6Q5VWK0 638 aa22.41■■□□□ 1.18
PMS2P4-201ENST00000412466 NBPF4Q96M43 638 aa22.41■■□□□ 1.18
PMS2P4-201ENST00000412466 C5P01031 1676 aa22.41■■□□□ 1.18
PMS2P4-201ENST00000412466 EIF4A2Q14240 407 aaKnown RBP22.4■■□□□ 1.18
PMS2P4-201ENST00000412466 USHBP1Q8N6Y0 703 aa22.4■■□□□ 1.18
PMS2P4-201ENST00000412466 KCNQ4P56696 695 aa22.39■■□□□ 1.17
PMS2P4-201ENST00000412466 NUDCQ9Y266 331 aa22.39■■□□□ 1.17
PMS2P4-201ENST00000412466 MSH5O43196 834 aa22.38■■□□□ 1.17
PMS2P4-201ENST00000412466 IL13P35225 146 aa22.37■■□□□ 1.17
PMS2P4-201ENST00000412466 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
PMS2P4-201ENST00000412466 PKD1L3Q7Z443 1732 aa22.36■■□□□ 1.17
PMS2P4-201ENST00000412466 COL3A1P02461 1466 aaPredicted RBP22.35■■□□□ 1.17
PMS2P4-201ENST00000412466 EYA1Q99502 592 aa22.34■■□□□ 1.17
PMS2P4-201ENST00000412466 PALLDQ8WX93 1383 aa22.33■■□□□ 1.17
PMS2P4-201ENST00000412466 TAF1LQ8IZX4 1826 aa22.33■■□□□ 1.16
PMS2P4-201ENST00000412466 IGSF1Q8N6C5 1336 aa22.32■■□□□ 1.16
PMS2P4-201ENST00000412466 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
PMS2P4-201ENST00000412466 FLAD1Q8NFF5 587 aa22.32■■□□□ 1.16
PMS2P4-201ENST00000412466 UTRNP46939 3433 aa22.31■■□□□ 1.16
PMS2P4-201ENST00000412466 ITGB4P16144 1822 aa22.31■■□□□ 1.16
PMS2P4-201ENST00000412466 NCAPD2Q15021 1401 aa22.31■■□□□ 1.16
PMS2P4-201ENST00000412466 PLEKHG2Q9H7P9 1386 aa22.3■■□□□ 1.16
PMS2P4-201ENST00000412466 COL23A1Q86Y22 540 aaPredicted RBP22.3■■□□□ 1.16
PMS2P4-201ENST00000412466 SMARCC1Q92922 1105 aaPredicted RBP22.3■■□□□ 1.16
PMS2P4-201ENST00000412466 U2SURPO15042 1029 aaKnown RBP22.29■■□□□ 1.16
PMS2P4-201ENST00000412466 MPRIPQ6WCQ1 1025 aa22.29■■□□□ 1.16
PMS2P4-201ENST00000412466 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
PMS2P4-201ENST00000412466 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
PMS2P4-201ENST00000412466 GRIN3BO60391 1043 aa22.28■■□□□ 1.16
PMS2P4-201ENST00000412466 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
PMS2P4-201ENST00000412466 KDRP35968 1356 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms