RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 SHANK3Q9BYB0 1731 aa32.15■■■□□ 2.74
UBE2E3-202ENST00000410062 AEBP1Q8IUX7 1158 aa32.13■■■□□ 2.73
UBE2E3-202ENST00000410062 SF3B2Q13435 895 aaKnown RBP32.11■■■□□ 2.73
UBE2E3-202ENST00000410062 RALBP1Q15311 655 aa32.11■■■□□ 2.73
UBE2E3-202ENST00000410062 SULT6B1Q6IMI4 303 aa32.11■■■□□ 2.73
UBE2E3-202ENST00000410062 CFAP53Q96M91 514 aa32.11■■■□□ 2.73
UBE2E3-202ENST00000410062 SBF2Q86WG5 1849 aa32.1■■■□□ 2.73
UBE2E3-202ENST00000410062 BCL9O00512 1426 aa32.09■■■□□ 2.73
UBE2E3-202ENST00000410062 TNS1Q9HBL0 1735 aaKnown RBP32.08■■■□□ 2.73
UBE2E3-202ENST00000410062 PKD1L3Q7Z443 1732 aa32.08■■■□□ 2.73
UBE2E3-202ENST00000410062 DEFB132Q7Z7B7 95 aa32.07■■■□□ 2.72
UBE2E3-202ENST00000410062 U2SURPO15042 1029 aaKnown RBP32.06■■■□□ 2.72
UBE2E3-202ENST00000410062 HMOX1P09601 288 aa32.06■■■□□ 2.72
UBE2E3-202ENST00000410062 PCDH11XQ9BZA7 1347 aa32.05■■■□□ 2.72
UBE2E3-202ENST00000410062 PCDH11YQ9BZA8 1340 aa32.05■■■□□ 2.72
UBE2E3-202ENST00000410062 KDRP35968 1356 aa32.05■■■□□ 2.72
UBE2E3-202ENST00000410062 PTF1AQ7RTS3 328 aa32.05■■■□□ 2.72
UBE2E3-202ENST00000410062 ACSBG1Q96GR2 724 aa32.05■■■□□ 2.72
UBE2E3-202ENST00000410062 SPG7Q9UQ90 795 aa32.05■■■□□ 2.72
UBE2E3-202ENST00000410062 CYP27B1O15528 508 aa32.03■■■□□ 2.72
UBE2E3-202ENST00000410062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.02■■■□□ 2.72
UBE2E3-202ENST00000410062 KAT6BQ8WYB5 2073 aa32.01■■■□□ 2.72
UBE2E3-202ENST00000410062 KCNQ2O43526 872 aa32.01■■■□□ 2.71
UBE2E3-202ENST00000410062 APBA3O96018 575 aa32.01■■■□□ 2.71
UBE2E3-202ENST00000410062 BAG6P46379 1132 aa32.01■■■□□ 2.71
UBE2E3-202ENST00000410062 BCL11BQ9C0K0 894 aaPredicted RBP32.01■■■□□ 2.71
UBE2E3-202ENST00000410062 PRKRIP1Q9H875 184 aaPredicted RBP32.01■■■□□ 2.71
UBE2E3-202ENST00000410062 MYBBP1AQ9BQG0 1328 aaKnown RBP31.99■■■□□ 2.71
UBE2E3-202ENST00000410062 EN1Q05925 392 aaPredicted RBP31.98■■■□□ 2.71
UBE2E3-202ENST00000410062 NHSQ6T4R5 1651 aa31.98■■■□□ 2.71
UBE2E3-202ENST00000410062 PLEKHG2Q9H7P9 1386 aa31.98■■■□□ 2.71
UBE2E3-202ENST00000410062 PLEKHO1Q53GL0 409 aaPredicted RBP31.98■■■□□ 2.71
UBE2E3-202ENST00000410062 NUDCQ9Y266 331 aa31.98■■■□□ 2.71
UBE2E3-202ENST00000410062 DOT1LQ8TEK3 1739 aa31.96■■■□□ 2.71
UBE2E3-202ENST00000410062 AMOTQ4VCS5 1084 aa31.94■■■□□ 2.7
UBE2E3-202ENST00000410062 PHKG2P15735 406 aa31.94■■■□□ 2.7
UBE2E3-202ENST00000410062 IFNL2Q8IZJ0 200 aa31.94■■■□□ 2.7
UBE2E3-202ENST00000410062 U2AF1L5P0DN76 240 aaPredicted RBP31.93■■■□□ 2.7
UBE2E3-202ENST00000410062 PRIM1P49642 420 aaKnown RBP31.93■■■□□ 2.7
UBE2E3-202ENST00000410062 U2AF1Q01081 240 aaKnown RBP eCLIP31.93■■■□□ 2.7
UBE2E3-202ENST00000410062 SYTL4Q96C24 671 aaPredicted RBP31.93■■■□□ 2.7
UBE2E3-202ENST00000410062 ZNF530Q6P9A1 599 aaPredicted RBP31.92■■■□□ 2.7
UBE2E3-202ENST00000410062 EZH2Q15910 746 aaKnown RBP31.91■■■□□ 2.7
UBE2E3-202ENST00000410062 NKX1-1Q15270 411 aaPredicted RBP31.9■■■□□ 2.7
UBE2E3-202ENST00000410062 CAMKK2Q96RR4 588 aa31.9■■■□□ 2.7
UBE2E3-202ENST00000410062 BTAF1O14981 1849 aa31.89■■■□□ 2.69
UBE2E3-202ENST00000410062 TOGARAM1Q9Y4F4 1720 aa31.89■■■□□ 2.69
UBE2E3-202ENST00000410062 RSPH6AQ9H0K4 717 aa31.87■■■□□ 2.69
UBE2E3-202ENST00000410062 PLSCR1O15162 318 aa31.85■■■□□ 2.69
UBE2E3-202ENST00000410062 PRKAR2BP31323 418 aa31.85■■■□□ 2.69
UBE2E3-202ENST00000410062 C1orf141Q5JVX7 400 aa31.85■■■□□ 2.69
UBE2E3-202ENST00000410062 MTHFSDQ2M296 383 aaKnown RBP31.85■■■□□ 2.69
UBE2E3-202ENST00000410062 FCHSD2O94868 740 aa31.82■■■□□ 2.68
UBE2E3-202ENST00000410062 ITGB4P16144 1822 aa31.82■■■□□ 2.68
UBE2E3-202ENST00000410062 ANP32CO43423 234 aa31.81■■■□□ 2.68
UBE2E3-202ENST00000410062 MPRIPQ6WCQ1 1025 aa31.81■■■□□ 2.68
UBE2E3-202ENST00000410062 HSP90AB1P08238 724 aaKnown RBP31.81■■■□□ 2.68
UBE2E3-202ENST00000410062 PHACTR3Q96KR7 559 aa31.81■■■□□ 2.68
UBE2E3-202ENST00000410062 RGPD3A6NKT7 1758 aaPredicted RBP31.8■■■□□ 2.68
UBE2E3-202ENST00000410062 RGPD4Q7Z3J3 1758 aa31.8■■■□□ 2.68
UBE2E3-202ENST00000410062 AKAP4Q5JQC9 854 aa31.8■■■□□ 2.68
UBE2E3-202ENST00000410062 DCAF5Q96JK2 942 aa31.8■■■□□ 2.68
UBE2E3-202ENST00000410062 KDM6AO15550 1401 aaPredicted RBP31.79■■■□□ 2.68
UBE2E3-202ENST00000410062 RREB1Q92766 1687 aa31.78■■■□□ 2.68
UBE2E3-202ENST00000410062 PROM2Q8N271 834 aa31.77■■■□□ 2.68
UBE2E3-202ENST00000410062 PIGBQ92521 554 aa31.76■■■□□ 2.67
UBE2E3-202ENST00000410062 TXNRD1Q16881 649 aa31.75■■■□□ 2.67
UBE2E3-202ENST00000410062 GAS2L2Q8NHY3 880 aa31.75■■■□□ 2.67
UBE2E3-202ENST00000410062 TMOD3Q9NYL9 352 aa31.75■■■□□ 2.67
UBE2E3-202ENST00000410062 NUP188Q5SRE5 1749 aa31.74■■■□□ 2.67
UBE2E3-202ENST00000410062 ERVV-2B6SEH9 535 aa31.73■■■□□ 2.67
UBE2E3-202ENST00000410062 LGR6Q9HBX8 967 aa31.72■■■□□ 2.67
UBE2E3-202ENST00000410062 SCN11AQ9UI33 1791 aa31.71■■■□□ 2.67
UBE2E3-202ENST00000410062 CCDC184Q52MB2 194 aa31.71■■■□□ 2.67
UBE2E3-202ENST00000410062 PLEKHF1Q96S99 279 aa31.7■■■□□ 2.67
UBE2E3-202ENST00000410062 VIRMAQ69YN4 1812 aaKnown RBP31.69■■■□□ 2.66
UBE2E3-202ENST00000410062 CABP4P57796 275 aa31.69■■■□□ 2.66
UBE2E3-202ENST00000410062 WDR43Q15061 677 aaKnown RBP eCLIP31.69■■■□□ 2.66
UBE2E3-202ENST00000410062 MAP3K5Q99683 1374 aa31.69■■■□□ 2.66
UBE2E3-202ENST00000410062 RNMTO43148 476 aaKnown RBP31.68■■■□□ 2.66
UBE2E3-202ENST00000410062 GNAT3A8MTJ3 354 aa31.68■■■□□ 2.66
UBE2E3-202ENST00000410062 LY75O60449 1722 aa31.67■■■□□ 2.66
UBE2E3-202ENST00000410062 NEFMP07197 916 aa31.67■■■□□ 2.66
UBE2E3-202ENST00000410062 NFATC2IPQ8NCF5 419 aa31.66■■■□□ 2.66
UBE2E3-202ENST00000410062 PNNQ9H307 717 aaKnown RBP31.66■■■□□ 2.66
UBE2E3-202ENST00000410062 ASAP1Q9ULH1 1129 aa31.66■■■□□ 2.66
UBE2E3-202ENST00000410062 PALLDQ8WX93 1383 aa31.65■■■□□ 2.66
UBE2E3-202ENST00000410062 KCNQ4P56696 695 aa31.65■■■□□ 2.66
UBE2E3-202ENST00000410062 LRRC4BQ9NT99 713 aa31.65■■■□□ 2.66
UBE2E3-202ENST00000410062 ADAMTS7Q9UKP4 1686 aa31.65■■■□□ 2.66
UBE2E3-202ENST00000410062 ADAMTS8Q9UP79 889 aa31.64■■■□□ 2.66
UBE2E3-202ENST00000410062 IL17REQ8NFR9 667 aa31.63■■■□□ 2.65
UBE2E3-202ENST00000410062 SMARCC1Q92922 1105 aaPredicted RBP31.63■■■□□ 2.65
UBE2E3-202ENST00000410062 ATG3Q9NT62 314 aa31.63■■■□□ 2.65
UBE2E3-202ENST00000410062 MAPK8IP3Q9UPT6 1336 aa31.63■■■□□ 2.65
UBE2E3-202ENST00000410062 SLC27A3Q5K4L6 730 aa31.62■■■□□ 2.65
UBE2E3-202ENST00000410062 SLC52A2Q9HAB3 445 aa31.62■■■□□ 2.65
UBE2E3-202ENST00000410062 PSDA5PKW4 1024 aaPredicted RBP31.61■■■□□ 2.65
UBE2E3-202ENST00000410062 NBPF14Q5TI25 921 aa31.61■■■□□ 2.65
UBE2E3-202ENST00000410062 CCDC146Q8IYE0 955 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms