RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ZBTB7CA1YPR0 619 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 EXOC5O00471 708 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 KCNQ4P56696 695 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 PRAM1Q96QH2 718 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 PIK3C2AO00443 1686 aa10.79□□□□□ -0.68
UBE2F-204ENST00000409953 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.68
UBE2F-204ENST00000409953 FAM50AQ14320 339 aaKnown RBP10.77□□□□□ -0.69
UBE2F-204ENST00000409953 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
UBE2F-204ENST00000409953 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
UBE2F-204ENST00000409953 ARHGAP27Q6ZUM4 889 aa10.76□□□□□ -0.69
UBE2F-204ENST00000409953 WDR17Q8IZU2 1322 aa10.76□□□□□ -0.69
UBE2F-204ENST00000409953 GCP02774 474 aa10.75□□□□□ -0.69
UBE2F-204ENST00000409953 HSPA8P11142 646 aaKnown RBP10.75□□□□□ -0.69
UBE2F-204ENST00000409953 PRPF38BQ5VTL8 546 aaKnown RBP10.75□□□□□ -0.69
UBE2F-204ENST00000409953 ABCC6O95255 1503 aa10.74□□□□□ -0.69
UBE2F-204ENST00000409953 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
UBE2F-204ENST00000409953 BCS1LQ9Y276 419 aa10.74□□□□□ -0.69
UBE2F-204ENST00000409953 PIK3C2GO75747 1445 aa10.74□□□□□ -0.69
UBE2F-204ENST00000409953 ABTB2Q8N961 1025 aa10.73□□□□□ -0.69
UBE2F-204ENST00000409953 WBP1LQ9NX94 342 aa10.73□□□□□ -0.69
UBE2F-204ENST00000409953 POGKQ9P215 609 aa10.73□□□□□ -0.69
UBE2F-204ENST00000409953 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
UBE2F-204ENST00000409953 CNTNAP1P78357 1384 aa10.73□□□□□ -0.69
UBE2F-204ENST00000409953 ROCK1Q13464 1354 aa10.71□□□□□ -0.69
UBE2F-204ENST00000409953 KAT6BQ8WYB5 2073 aa10.71□□□□□ -0.69
UBE2F-204ENST00000409953 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
UBE2F-204ENST00000409953 CARD10Q9BWT7 1032 aa10.71□□□□□ -0.69
UBE2F-204ENST00000409953 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
UBE2F-204ENST00000409953 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
UBE2F-204ENST00000409953 RNF181Q9P0P0 153 aa10.7□□□□□ -0.7
UBE2F-204ENST00000409953 ITSN1Q15811 1721 aa10.7□□□□□ -0.7
UBE2F-204ENST00000409953 WASLO00401 505 aaPredicted RBP10.69□□□□□ -0.7
UBE2F-204ENST00000409953 CSB-PGBD3P0DP91 1061 aa10.69□□□□□ -0.7
UBE2F-204ENST00000409953 NLRP13Q86W25 1043 aa10.69□□□□□ -0.7
UBE2F-204ENST00000409953 COL18A1P39060 1754 aa10.69□□□□□ -0.7
UBE2F-204ENST00000409953 LY75O60449 1722 aa10.68□□□□□ -0.7
UBE2F-204ENST00000409953 VEGFBP49765 207 aa10.68□□□□□ -0.7
UBE2F-204ENST00000409953 CCNL1Q9UK58 526 aaPredicted RBP10.68□□□□□ -0.7
UBE2F-204ENST00000409953 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
UBE2F-204ENST00000409953 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
UBE2F-204ENST00000409953 QRICH2Q9H0J4 1663 aa10.67□□□□□ -0.7
UBE2F-204ENST00000409953 VEGFAP15692 232 aaPredicted RBP10.67□□□□□ -0.7
UBE2F-204ENST00000409953 POLR3AO14802 1390 aaPredicted RBP10.66□□□□□ -0.7
UBE2F-204ENST00000409953 DLL1O00548 723 aa10.66□□□□□ -0.7
UBE2F-204ENST00000409953 FCHSD2O94868 740 aa10.66□□□□□ -0.7
UBE2F-204ENST00000409953 FLAD1Q8NFF5 587 aa10.66□□□□□ -0.7
UBE2F-204ENST00000409953 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
UBE2F-204ENST00000409953 KIAA1551Q9HCM1 1747 aa10.66□□□□□ -0.7
UBE2F-204ENST00000409953 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
UBE2F-204ENST00000409953 ACEP12821 1306 aa10.65□□□□□ -0.7
UBE2F-204ENST00000409953 RGL3Q3MIN7 710 aa10.65□□□□□ -0.7
UBE2F-204ENST00000409953 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
UBE2F-204ENST00000409953 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
UBE2F-204ENST00000409953 VIRMAQ69YN4 1812 aaKnown RBP10.65□□□□□ -0.71
UBE2F-204ENST00000409953 A0A0G2JLW4 131 aa10.64□□□□□ -0.71
UBE2F-204ENST00000409953 SMIM5Q71RC9 77 aa10.64□□□□□ -0.71
UBE2F-204ENST00000409953 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
UBE2F-204ENST00000409953 MCOLN1Q9GZU1 580 aa10.64□□□□□ -0.71
UBE2F-204ENST00000409953 C14orf93Q9H972 538 aaKnown RBP10.64□□□□□ -0.71
UBE2F-204ENST00000409953 FBXO3Q9UK99 471 aa10.64□□□□□ -0.71
UBE2F-204ENST00000409953 CPSF1Q10570 1443 aaKnown RBP10.64□□□□□ -0.71
UBE2F-204ENST00000409953 CFAP70Q5T0N1 1121 aa10.63□□□□□ -0.71
UBE2F-204ENST00000409953 SLIT3O75094 1523 aa10.63□□□□□ -0.71
UBE2F-204ENST00000409953 SPATA31E1Q6ZUB1 1445 aa10.62□□□□□ -0.71
UBE2F-204ENST00000409953 TGFB2P61812 414 aa10.62□□□□□ -0.71
UBE2F-204ENST00000409953 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
UBE2F-204ENST00000409953 GCC1Q96CN9 775 aa10.62□□□□□ -0.71
UBE2F-204ENST00000409953 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
UBE2F-204ENST00000409953 KIF13BQ9NQT8 1826 aa10.62□□□□□ -0.71
UBE2F-204ENST00000409953 C5P01031 1676 aa10.62□□□□□ -0.71
UBE2F-204ENST00000409953 ERBB3P21860 1342 aa10.61□□□□□ -0.71
UBE2F-204ENST00000409953 RGPD5Q99666 1765 aa10.61□□□□□ -0.71
UBE2F-204ENST00000409953 NSD2O96028 1365 aa10.61□□□□□ -0.71
UBE2F-204ENST00000409953 GLTPD2A6NH11 291 aa10.6□□□□□ -0.71
UBE2F-204ENST00000409953 IL2RBP14784 551 aa10.6□□□□□ -0.71
UBE2F-204ENST00000409953 DPEP1P16444 411 aa10.6□□□□□ -0.71
UBE2F-204ENST00000409953 PRIM1P49642 420 aaKnown RBP10.6□□□□□ -0.71
UBE2F-204ENST00000409953 SOX10P56693 466 aa10.6□□□□□ -0.71
UBE2F-204ENST00000409953 ARFGEF1Q9Y6D6 1849 aa10.6□□□□□ -0.71
UBE2F-204ENST00000409953 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
UBE2F-204ENST00000409953 PHF14O94880 888 aa10.59□□□□□ -0.71
UBE2F-204ENST00000409953 NLRP6P59044 892 aa10.59□□□□□ -0.71
UBE2F-204ENST00000409953 HABP4Q5JVS0 413 aaKnown RBP10.59□□□□□ -0.71
UBE2F-204ENST00000409953 CHADLQ6NUI6 762 aa10.59□□□□□ -0.71
UBE2F-204ENST00000409953 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
UBE2F-204ENST00000409953 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
UBE2F-204ENST00000409953 BRCA1P38398 1863 aaKnown RBP10.59□□□□□ -0.71
UBE2F-204ENST00000409953 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
UBE2F-204ENST00000409953 AMIGO3Q86WK7 504 aa10.58□□□□□ -0.72
UBE2F-204ENST00000409953 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
UBE2F-204ENST00000409953 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
UBE2F-204ENST00000409953 SBF1O95248 1867 aa10.57□□□□□ -0.72
UBE2F-204ENST00000409953 USP47Q96K76 1375 aa10.57□□□□□ -0.72
UBE2F-204ENST00000409953 MMP10P09238 476 aa10.57□□□□□ -0.72
UBE2F-204ENST00000409953 ARHGEF25Q86VW2 580 aa10.57□□□□□ -0.72
UBE2F-204ENST00000409953 DDX54Q8TDD1 881 aaKnown RBP10.57□□□□□ -0.72
UBE2F-204ENST00000409953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms